RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 RGPD4Q7Z3J3 1758 aa23.37■■□□□ 1.33
CLDND1-221ENST00000510541 BAG6P46379 1132 aa23.36■■□□□ 1.33
CLDND1-221ENST00000510541 PLSCR1O15162 318 aa23.35■■□□□ 1.33
CLDND1-221ENST00000510541 SHANK3Q9BYB0 1731 aa23.35■■□□□ 1.33
CLDND1-221ENST00000510541 COL3A1P02461 1466 aaPredicted RBP23.34■■□□□ 1.33
CLDND1-221ENST00000510541 PCDH11XQ9BZA7 1347 aa23.33■■□□□ 1.33
CLDND1-221ENST00000510541 PCDH11YQ9BZA8 1340 aa23.33■■□□□ 1.33
CLDND1-221ENST00000510541 FAM182BQ5T319 152 aa23.33■■□□□ 1.33
CLDND1-221ENST00000510541 NKX1-1Q15270 411 aaPredicted RBP23.32■■□□□ 1.32
CLDND1-221ENST00000510541 RALBP1Q15311 655 aa23.32■■□□□ 1.32
CLDND1-221ENST00000510541 NHSQ6T4R5 1651 aa23.32■■□□□ 1.32
CLDND1-221ENST00000510541 TRIM37O94972 964 aa23.31■■□□□ 1.32
CLDND1-221ENST00000510541 SPG7Q9UQ90 795 aa23.31■■□□□ 1.32
CLDND1-221ENST00000510541 DIAPH1O60610 1272 aaKnown RBP23.3■■□□□ 1.32
CLDND1-221ENST00000510541 PPP2R1AP30153 589 aa23.3■■□□□ 1.32
CLDND1-221ENST00000510541 USHBP1Q8N6Y0 703 aa23.3■■□□□ 1.32
CLDND1-221ENST00000510541 AMOTQ4VCS5 1084 aa23.29■■□□□ 1.32
CLDND1-221ENST00000510541 CAMKK2Q96RR4 588 aa23.29■■□□□ 1.32
CLDND1-221ENST00000510541 CFAP53Q96M91 514 aa23.28■■□□□ 1.32
CLDND1-221ENST00000510541 DDX10Q13206 875 aaKnown RBP23.27■■□□□ 1.32
CLDND1-221ENST00000510541 ZNF316A6NFI3 1004 aaPredicted RBP23.25■■□□□ 1.31
CLDND1-221ENST00000510541 CYP27B1O15528 508 aa23.25■■□□□ 1.31
CLDND1-221ENST00000510541 APBA3O96018 575 aa23.25■■□□□ 1.31
CLDND1-221ENST00000510541 DDX54Q8TDD1 881 aaKnown RBP23.24■■□□□ 1.31
CLDND1-221ENST00000510541 PLEKHO1Q53GL0 409 aaPredicted RBP23.23■■□□□ 1.31
CLDND1-221ENST00000510541 DEFB132Q7Z7B7 95 aa23.23■■□□□ 1.31
CLDND1-221ENST00000510541 IFNL2Q8IZJ0 200 aa23.23■■□□□ 1.31
CLDND1-221ENST00000510541 RREB1Q92766 1687 aa23.22■■□□□ 1.31
CLDND1-221ENST00000510541 HMGB2P26583 209 aaKnown RBP23.22■■□□□ 1.31
CLDND1-221ENST00000510541 SULT6B1Q6IMI4 303 aa23.22■■□□□ 1.31
CLDND1-221ENST00000510541 HSP90AB1P08238 724 aaKnown RBP23.21■■□□□ 1.31
CLDND1-221ENST00000510541 NUDCQ9Y266 331 aa23.21■■□□□ 1.31
CLDND1-221ENST00000510541 PHKG2P15735 406 aa23.19■■□□□ 1.3
CLDND1-221ENST00000510541 EN1Q05925 392 aaPredicted RBP23.19■■□□□ 1.3
CLDND1-221ENST00000510541 KCNQ2O43526 872 aa23.17■■□□□ 1.3
CLDND1-221ENST00000510541 AEBP1Q8IUX7 1158 aa23.17■■□□□ 1.3
CLDND1-221ENST00000510541 BTAF1O14981 1849 aa23.17■■□□□ 1.3
CLDND1-221ENST00000510541 DOT1LQ8TEK3 1739 aa23.16■■□□□ 1.3
CLDND1-221ENST00000510541 MYBBP1AQ9BQG0 1328 aaKnown RBP23.16■■□□□ 1.3
CLDND1-221ENST00000510541 FCHSD2O94868 740 aa23.16■■□□□ 1.3
CLDND1-221ENST00000510541 DCAF5Q96JK2 942 aa23.16■■□□□ 1.3
CLDND1-221ENST00000510541 ERVV-2B6SEH9 535 aa23.15■■□□□ 1.3
CLDND1-221ENST00000510541 EZH2Q15910 746 aaKnown RBP23.15■■□□□ 1.3
CLDND1-221ENST00000510541 PRIM1P49642 420 aaKnown RBP23.14■■□□□ 1.29
CLDND1-221ENST00000510541 PTF1AQ7RTS3 328 aa23.14■■□□□ 1.29
CLDND1-221ENST00000510541 PRKRIP1Q9H875 184 aaPredicted RBP23.14■■□□□ 1.29
CLDND1-221ENST00000510541 SLC27A3Q5K4L6 730 aa23.13■■□□□ 1.29
CLDND1-221ENST00000510541 NUP188Q5SRE5 1749 aa23.13■■□□□ 1.29
CLDND1-221ENST00000510541 AKAP4Q5JQC9 854 aa23.12■■□□□ 1.29
CLDND1-221ENST00000510541 PROM2Q8N271 834 aa23.12■■□□□ 1.29
CLDND1-221ENST00000510541 ACSBG1Q96GR2 724 aa23.12■■□□□ 1.29
CLDND1-221ENST00000510541 ADAMTS7Q9UKP4 1686 aa23.12■■□□□ 1.29
CLDND1-221ENST00000510541 KAT6BQ8WYB5 2073 aa23.12■■□□□ 1.29
CLDND1-221ENST00000510541 TOGARAM1Q9Y4F4 1720 aa23.11■■□□□ 1.29
CLDND1-221ENST00000510541 RSPH6AQ9H0K4 717 aa23.11■■□□□ 1.29
CLDND1-221ENST00000510541 LY75O60449 1722 aa23.11■■□□□ 1.29
CLDND1-221ENST00000510541 ITGB4P16144 1822 aa23.1■■□□□ 1.29
CLDND1-221ENST00000510541 C1orf141Q5JVX7 400 aa23.1■■□□□ 1.29
CLDND1-221ENST00000510541 ZNF530Q6P9A1 599 aaPredicted RBP23.1■■□□□ 1.29
CLDND1-221ENST00000510541 TXNRD1Q16881 649 aa23.09■■□□□ 1.29
CLDND1-221ENST00000510541 SMARCC1Q92922 1105 aaPredicted RBP23.09■■□□□ 1.29
CLDND1-221ENST00000510541 U2SURPO15042 1029 aaKnown RBP23.08■■□□□ 1.29
CLDND1-221ENST00000510541 HMOX1P09601 288 aa23.08■■□□□ 1.29
CLDND1-221ENST00000510541 NBPF14Q5TI25 921 aa23.08■■□□□ 1.29
CLDND1-221ENST00000510541 GAS2L2Q8NHY3 880 aa23.08■■□□□ 1.29
CLDND1-221ENST00000510541 PNNQ9H307 717 aaKnown RBP23.08■■□□□ 1.29
CLDND1-221ENST00000510541 KDM6AO15550 1401 aaPredicted RBP23.07■■□□□ 1.28
CLDND1-221ENST00000510541 CNGB1Q14028 1251 aaPredicted RBP23.06■■□□□ 1.28
CLDND1-221ENST00000510541 SCN11AQ9UI33 1791 aa23.06■■□□□ 1.28
CLDND1-221ENST00000510541 ZNF831Q5JPB2 1677 aa23.06■■□□□ 1.28
CLDND1-221ENST00000510541 MRC1P22897 1456 aa23.05■■□□□ 1.28
CLDND1-221ENST00000510541 PAPPAQ13219 1627 aa23.05■■□□□ 1.28
CLDND1-221ENST00000510541 MTHFSDQ2M296 383 aaKnown RBP23.05■■□□□ 1.28
CLDND1-221ENST00000510541 PIGBQ92521 554 aa23.05■■□□□ 1.28
CLDND1-221ENST00000510541 U2AF1L5P0DN76 240 aaPredicted RBP23.04■■□□□ 1.28
CLDND1-221ENST00000510541 U2AF1Q01081 240 aaKnown RBP eCLIP23.04■■□□□ 1.28
CLDND1-221ENST00000510541 SYTL4Q96C24 671 aaPredicted RBP23.04■■□□□ 1.28
CLDND1-221ENST00000510541 TMOD3Q9NYL9 352 aa23.04■■□□□ 1.28
CLDND1-221ENST00000510541 HTATSF1O43719 755 aaKnown RBP23.02■■□□□ 1.28
CLDND1-221ENST00000510541 PRKAR2BP31323 418 aa23.01■■□□□ 1.27
CLDND1-221ENST00000510541 MPRIPQ6WCQ1 1025 aa23.01■■□□□ 1.27
CLDND1-221ENST00000510541 PLEKHF1Q96S99 279 aa23■■□□□ 1.27
CLDND1-221ENST00000510541 CEMIPQ8WUJ3 1361 aa23■■□□□ 1.27
CLDND1-221ENST00000510541 PALLDQ8WX93 1383 aa23■■□□□ 1.27
CLDND1-221ENST00000510541 MAP3K5Q99683 1374 aa23■■□□□ 1.27
CLDND1-221ENST00000510541 GNAT3A8MTJ3 354 aa22.99■■□□□ 1.27
CLDND1-221ENST00000510541 LRRC4BQ9NT99 713 aa22.99■■□□□ 1.27
CLDND1-221ENST00000510541 RNMTO43148 476 aaKnown RBP22.98■■□□□ 1.27
CLDND1-221ENST00000510541 QSER1Q2KHR3 1735 aa22.98■■□□□ 1.27
CLDND1-221ENST00000510541 CICQ96RK0 1608 aaPredicted RBP22.97■■□□□ 1.27
CLDND1-221ENST00000510541 CABP4P57796 275 aa22.97■■□□□ 1.27
CLDND1-221ENST00000510541 SLC15A2Q16348 729 aa22.97■■□□□ 1.27
CLDND1-221ENST00000510541 PHACTR3Q96KR7 559 aa22.97■■□□□ 1.27
CLDND1-221ENST00000510541 SLC52A2Q9HAB3 445 aa22.97■■□□□ 1.27
CLDND1-221ENST00000510541 NEFMP07197 916 aa22.96■■□□□ 1.27
CLDND1-221ENST00000510541 AKT1S1Q96B36 256 aa22.95■■□□□ 1.26
CLDND1-221ENST00000510541 ATG3Q9NT62 314 aa22.95■■□□□ 1.26
CLDND1-221ENST00000510541 VIRMAQ69YN4 1812 aaKnown RBP22.94■■□□□ 1.26
CLDND1-221ENST00000510541 STK32BQ9NY57 414 aa22.94■■□□□ 1.26
CLDND1-221ENST00000510541 CCNL1Q9UK58 526 aaPredicted RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms