RNA–Protein interactions for RNA: ENST00000510193.1

SH3BP2-216, Transcript of SH3 domain binding protein 2, humanhuman

TSL 3

Gene SH3BP2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-216ENST00000510193 NSD2O96028 1365 aa17.64■□□□□ 0.41
SH3BP2-216ENST00000510193 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.41
SH3BP2-216ENST00000510193 PDGFDQ9GZP0 370 aaPredicted RBP17.63■□□□□ 0.41
SH3BP2-216ENST00000510193 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
SH3BP2-216ENST00000510193 PKD1L3Q7Z443 1732 aa17.61■□□□□ 0.41
SH3BP2-216ENST00000510193 CGNL1Q0VF96 1302 aa17.61■□□□□ 0.41
SH3BP2-216ENST00000510193 ZCRB1Q8TBF4 217 aaKnown RBP17.6■□□□□ 0.41
SH3BP2-216ENST00000510193 POLR3GLQ9BT43 218 aa17.6■□□□□ 0.41
SH3BP2-216ENST00000510193 MAP2P11137 1827 aaKnown RBP17.6■□□□□ 0.41
SH3BP2-216ENST00000510193 LY75O60449 1722 aa17.59■□□□□ 0.41
SH3BP2-216ENST00000510193 TOGARAM1Q9Y4F4 1720 aa17.59■□□□□ 0.41
SH3BP2-216ENST00000510193 LRRC4BQ9NT99 713 aa17.58■□□□□ 0.4
SH3BP2-216ENST00000510193 POLKQ9UBT6 870 aa17.58■□□□□ 0.4
SH3BP2-216ENST00000510193 WASHC2AQ641Q2 1341 aa17.57■□□□□ 0.4
SH3BP2-216ENST00000510193 SLC15A2Q16348 729 aa17.57■□□□□ 0.4
SH3BP2-216ENST00000510193 PRIM1P49642 420 aaKnown RBP17.56■□□□□ 0.4
SH3BP2-216ENST00000510193 ZNF827Q17R98 1081 aa17.56■□□□□ 0.4
SH3BP2-216ENST00000510193 PANK3Q9H999 370 aa17.56■□□□□ 0.4
SH3BP2-216ENST00000510193 SPON1Q9HCB6 807 aa17.56■□□□□ 0.4
SH3BP2-216ENST00000510193 RAPGEF4Q8WZA2 1011 aa17.55■□□□□ 0.4
SH3BP2-216ENST00000510193 STK32BQ9NY57 414 aa17.55■□□□□ 0.4
SH3BP2-216ENST00000510193 QSER1Q2KHR3 1735 aa17.55■□□□□ 0.4
SH3BP2-216ENST00000510193 TUBGCP6Q96RT7 1819 aa17.54■□□□□ 0.4
SH3BP2-216ENST00000510193 TATP17735 454 aaPredicted RBP17.54■□□□□ 0.4
SH3BP2-216ENST00000510193 PPM1GO15355 546 aaPredicted RBP17.53■□□□□ 0.4
SH3BP2-216ENST00000510193 CYP27B1O15528 508 aa17.53■□□□□ 0.4
SH3BP2-216ENST00000510193 PTGER2P43116 358 aa17.53■□□□□ 0.4
SH3BP2-216ENST00000510193 PCDH11XQ9BZA7 1347 aa17.52■□□□□ 0.4
SH3BP2-216ENST00000510193 PCDH11YQ9BZA8 1340 aa17.52■□□□□ 0.4
SH3BP2-216ENST00000510193 ZBTB7AO95365 584 aa17.52■□□□□ 0.4
SH3BP2-216ENST00000510193 SYTL4Q96C24 671 aaPredicted RBP17.52■□□□□ 0.4
SH3BP2-216ENST00000510193 EYA1Q99502 592 aa17.52■□□□□ 0.4
SH3BP2-216ENST00000510193 KIF7Q2M1P5 1343 aa17.51■□□□□ 0.39
SH3BP2-216ENST00000510193 TNNT2P45379 298 aaPredicted RBP17.51■□□□□ 0.39
SH3BP2-216ENST00000510193 KCNQ4P56696 695 aa17.51■□□□□ 0.39
SH3BP2-216ENST00000510193 AKT1S1Q96B36 256 aa17.51■□□□□ 0.39
SH3BP2-216ENST00000510193 KAT6BQ8WYB5 2073 aa17.51■□□□□ 0.39
SH3BP2-216ENST00000510193 EIF4A2Q14240 407 aaKnown RBP17.5■□□□□ 0.39
SH3BP2-216ENST00000510193 SLC27A3Q5K4L6 730 aa17.5■□□□□ 0.39
SH3BP2-216ENST00000510193 SGIP1Q9BQI5 828 aa17.5■□□□□ 0.39
SH3BP2-216ENST00000510193 COL24A1Q17RW2 1714 aa17.5■□□□□ 0.39
SH3BP2-216ENST00000510193 ITGB4P16144 1822 aa17.49■□□□□ 0.39
SH3BP2-216ENST00000510193 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
SH3BP2-216ENST00000510193 C5P01031 1676 aa17.47■□□□□ 0.39
SH3BP2-216ENST00000510193 PNPLA7Q6ZV29 1317 aa17.47■□□□□ 0.39
SH3BP2-216ENST00000510193 IGSF1Q8N6C5 1336 aa17.47■□□□□ 0.39
SH3BP2-216ENST00000510193 NKX1-1Q15270 411 aaPredicted RBP17.46■□□□□ 0.39
SH3BP2-216ENST00000510193 AMER1Q5JTC6 1135 aaPredicted RBP17.46■□□□□ 0.39
SH3BP2-216ENST00000510193 MTFR1LQ9H019 292 aa17.46■□□□□ 0.39
SH3BP2-216ENST00000510193 PPP1R1BQ9UD71 204 aaPredicted RBP17.46■□□□□ 0.39
SH3BP2-216ENST00000510193 TAF1LQ8IZX4 1826 aa17.45■□□□□ 0.38
SH3BP2-216ENST00000510193 PLEKHG2Q9H7P9 1386 aa17.44■□□□□ 0.38
SH3BP2-216ENST00000510193 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.44■□□□□ 0.38
SH3BP2-216ENST00000510193 CCNL1Q9UK58 526 aaPredicted RBP17.44■□□□□ 0.38
SH3BP2-216ENST00000510193 PALLDQ8WX93 1383 aa17.43■□□□□ 0.38
SH3BP2-216ENST00000510193 PHKG2P15735 406 aa17.42■□□□□ 0.38
SH3BP2-216ENST00000510193 MORC1Q86VD1 984 aa17.42■□□□□ 0.38
SH3BP2-216ENST00000510193 SPG7Q9UQ90 795 aa17.42■□□□□ 0.38
SH3BP2-216ENST00000510193 PER1O15534 1290 aaPredicted RBP17.41■□□□□ 0.38
SH3BP2-216ENST00000510193 MPRIPQ6WCQ1 1025 aa17.41■□□□□ 0.38
SH3BP2-216ENST00000510193 PIGBQ92521 554 aa17.41■□□□□ 0.38
SH3BP2-216ENST00000510193 KNSTRNQ9Y448 316 aa17.41■□□□□ 0.38
SH3BP2-216ENST00000510193 C4BP0C0L5 1744 aa17.4■□□□□ 0.38
SH3BP2-216ENST00000510193 AEBP1Q8IUX7 1158 aa17.39■□□□□ 0.37
SH3BP2-216ENST00000510193 FHDC1Q9C0D6 1143 aaPredicted RBP17.39■□□□□ 0.37
SH3BP2-216ENST00000510193 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
SH3BP2-216ENST00000510193 TFCP2L1Q9NZI6 479 aa17.38■□□□□ 0.37
SH3BP2-216ENST00000510193 KDRP35968 1356 aa17.38■□□□□ 0.37
SH3BP2-216ENST00000510193 MAP3K5Q99683 1374 aa17.38■□□□□ 0.37
SH3BP2-216ENST00000510193 IL13P35225 146 aa17.37■□□□□ 0.37
SH3BP2-216ENST00000510193 IFNL2Q8IZJ0 200 aa17.37■□□□□ 0.37
SH3BP2-216ENST00000510193 SLC16A10Q8TF71 515 aa17.37■□□□□ 0.37
SH3BP2-216ENST00000510193 SYT17Q9BSW7 474 aa17.37■□□□□ 0.37
SH3BP2-216ENST00000510193 UBR3Q6ZT12 1888 aa17.36■□□□□ 0.37
SH3BP2-216ENST00000510193 AMIGO3Q86WK7 504 aa17.36■□□□□ 0.37
SH3BP2-216ENST00000510193 COL23A1Q86Y22 540 aaPredicted RBP17.36■□□□□ 0.37
SH3BP2-216ENST00000510193 SMARCC1Q92922 1105 aaPredicted RBP17.35■□□□□ 0.37
SH3BP2-216ENST00000510193 ARXQ96QS3 562 aa17.35■□□□□ 0.37
SH3BP2-216ENST00000510193 COL3A1P02461 1466 aaPredicted RBP17.34■□□□□ 0.37
SH3BP2-216ENST00000510193 ASAP1Q9ULH1 1129 aa17.34■□□□□ 0.37
SH3BP2-216ENST00000510193 NPC1L1Q9UHC9 1359 aa17.33■□□□□ 0.36
SH3BP2-216ENST00000510193 TMOD3Q9NYL9 352 aa17.33■□□□□ 0.36
SH3BP2-216ENST00000510193 ZNF831Q5JPB2 1677 aa17.32■□□□□ 0.36
SH3BP2-216ENST00000510193 MTHFSP49914 203 aa17.32■□□□□ 0.36
SH3BP2-216ENST00000510193 ITPK1Q13572 414 aa17.32■□□□□ 0.36
SH3BP2-216ENST00000510193 LINC00116Q8NCU8 138 aa17.32■□□□□ 0.36
SH3BP2-216ENST00000510193 ATG3Q9NT62 314 aa17.32■□□□□ 0.36
SH3BP2-216ENST00000510193 LOC102724428A0A0B4J2F2 783 aa17.31■□□□□ 0.36
SH3BP2-216ENST00000510193 SIK1P57059 783 aa17.31■□□□□ 0.36
SH3BP2-216ENST00000510193 PLEKHO1Q53GL0 409 aaPredicted RBP17.31■□□□□ 0.36
SH3BP2-216ENST00000510193 CC2D1BQ5T0F9 858 aaKnown RBP17.31■□□□□ 0.36
SH3BP2-216ENST00000510193 SULT6B1Q6IMI4 303 aa17.31■□□□□ 0.36
SH3BP2-216ENST00000510193 ZNF530Q6P9A1 599 aaPredicted RBP17.31■□□□□ 0.36
SH3BP2-216ENST00000510193 SMIM5Q71RC9 77 aa17.31■□□□□ 0.36
SH3BP2-216ENST00000510193 COL5A3P25940 1745 aaPredicted RBP17.3■□□□□ 0.36
SH3BP2-216ENST00000510193 DCAF5Q96JK2 942 aa17.3■□□□□ 0.36
SH3BP2-216ENST00000510193 SLC4A9Q96Q91 983 aa17.3■□□□□ 0.36
SH3BP2-216ENST00000510193 ERVV-2B6SEH9 535 aa17.29■□□□□ 0.36
SH3BP2-216ENST00000510193 AMOTQ4VCS5 1084 aa17.29■□□□□ 0.36
SH3BP2-216ENST00000510193 SCN11AQ9UI33 1791 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms