RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 IL2RBP14784 551 aa27.6■■■□□ 2.01
HOXC9-203ENST00000508190 THRAP3Q9Y2W1 955 aaKnown RBP27.6■■■□□ 2.01
HOXC9-203ENST00000508190 OVOS2A0A0G2JMS6 1433 aa27.6■■■□□ 2.01
HOXC9-203ENST00000508190 THSD7AQ9UPZ6 1657 aa27.59■■■□□ 2.01
HOXC9-203ENST00000508190 TATP17735 454 aaPredicted RBP27.59■■■□□ 2.01
HOXC9-203ENST00000508190 PHF23Q9BUL5 403 aaPredicted RBP27.59■■■□□ 2.01
HOXC9-203ENST00000508190 PNNQ9H307 717 aaKnown RBP27.58■■■□□ 2.01
HOXC9-203ENST00000508190 MAPK8IP3Q9UPT6 1336 aa27.58■■■□□ 2.01
HOXC9-203ENST00000508190 FAM98CQ17RN3 349 aaKnown RBP27.57■■■□□ 2
HOXC9-203ENST00000508190 BARGINQ6ZT62 677 aa27.57■■■□□ 2
HOXC9-203ENST00000508190 NEFMP07197 916 aa27.54■■■□□ 2
HOXC9-203ENST00000508190 BRWD3Q6RI45 1802 aa27.53■■■□□ 2
HOXC9-203ENST00000508190 APAF1O14727 1248 aa27.53■■■□□ 2
HOXC9-203ENST00000508190 MTHFSDQ2M296 383 aaKnown RBP27.53■■■□□ 2
HOXC9-203ENST00000508190 RRP7AQ9Y3A4 280 aaKnown RBP27.52■■■□□ 2
HOXC9-203ENST00000508190 PLEKHO1Q53GL0 409 aaPredicted RBP27.51■■■□□ 2
HOXC9-203ENST00000508190 POTEAQ6S8J7 498 aa27.51■■■□□ 2
HOXC9-203ENST00000508190 PLEKHG2Q9H7P9 1386 aa27.51■■■□□ 2
HOXC9-203ENST00000508190 CDCA7Q9BWT1 371 aaPredicted RBP27.51■■□□□ 1.99
HOXC9-203ENST00000508190 TNS2Q63HR2 1409 aa27.5■■□□□ 1.99
HOXC9-203ENST00000508190 TMPOP42166 694 aaKnown RBP27.49■■□□□ 1.99
HOXC9-203ENST00000508190 NEUROD2Q15784 382 aa27.49■■□□□ 1.99
HOXC9-203ENST00000508190 AMOTQ4VCS5 1084 aa27.49■■□□□ 1.99
HOXC9-203ENST00000508190 ZCRB1Q8TBF4 217 aaKnown RBP27.49■■□□□ 1.99
HOXC9-203ENST00000508190 A0A0G2JS52 829 aa27.48■■□□□ 1.99
HOXC9-203ENST00000508190 RBM6P78332 1123 aaKnown RBP27.48■■□□□ 1.99
HOXC9-203ENST00000508190 MYT1Q01538 1121 aa27.48■■□□□ 1.99
HOXC9-203ENST00000508190 NFE2L2Q16236 605 aa27.48■■□□□ 1.99
HOXC9-203ENST00000508190 ZNF530Q6P9A1 599 aaPredicted RBP27.48■■□□□ 1.99
HOXC9-203ENST00000508190 SPG7Q9UQ90 795 aa27.48■■□□□ 1.99
HOXC9-203ENST00000508190 GAS2L2Q8NHY3 880 aa27.47■■□□□ 1.99
HOXC9-203ENST00000508190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.47■■□□□ 1.99
HOXC9-203ENST00000508190 SALL2Q9Y467 1007 aaPredicted RBP27.46■■□□□ 1.99
HOXC9-203ENST00000508190 SCN11AQ9UI33 1791 aa27.46■■□□□ 1.99
HOXC9-203ENST00000508190 ONECUT3O60422 494 aaPredicted RBP27.45■■□□□ 1.98
HOXC9-203ENST00000508190 HNRNPUQ00839 825 aaKnown RBP eCLIP27.45■■□□□ 1.98
HOXC9-203ENST00000508190 DDB1Q16531 1140 aa27.45■■□□□ 1.98
HOXC9-203ENST00000508190 YTHDC1Q96MU7 727 aaKnown RBP27.45■■□□□ 1.98
HOXC9-203ENST00000508190 PCDH11XQ9BZA7 1347 aa27.44■■□□□ 1.98
HOXC9-203ENST00000508190 PCDH11YQ9BZA8 1340 aa27.44■■□□□ 1.98
HOXC9-203ENST00000508190 EXOC5O00471 708 aa27.44■■□□□ 1.98
HOXC9-203ENST00000508190 CYP27B1O15528 508 aa27.44■■□□□ 1.98
HOXC9-203ENST00000508190 RXRBP28702 533 aa27.44■■□□□ 1.98
HOXC9-203ENST00000508190 RIPK4P57078 832 aa27.44■■□□□ 1.98
HOXC9-203ENST00000508190 KAT6BQ8WYB5 2073 aa27.43■■□□□ 1.98
HOXC9-203ENST00000508190 SEPT12Q8IYM1 358 aa27.43■■□□□ 1.98
HOXC9-203ENST00000508190 DDX54Q8TDD1 881 aaKnown RBP27.43■■□□□ 1.98
HOXC9-203ENST00000508190 MAP3K5Q99683 1374 aa27.43■■□□□ 1.98
HOXC9-203ENST00000508190 TOGARAM1Q9Y4F4 1720 aa27.42■■□□□ 1.98
HOXC9-203ENST00000508190 ADAMTS7Q9UKP4 1686 aa27.42■■□□□ 1.98
HOXC9-203ENST00000508190 PHKG2P15735 406 aa27.41■■□□□ 1.98
HOXC9-203ENST00000508190 C1orf141Q5JVX7 400 aa27.41■■□□□ 1.98
HOXC9-203ENST00000508190 AKAP4Q5JQC9 854 aa27.41■■□□□ 1.98
HOXC9-203ENST00000508190 RGS12O14924 1447 aa27.4■■□□□ 1.98
HOXC9-203ENST00000508190 IFNL2Q8IZJ0 200 aa27.4■■□□□ 1.98
HOXC9-203ENST00000508190 DOT1LQ8TEK3 1739 aa27.39■■□□□ 1.98
HOXC9-203ENST00000508190 GNAT3A8MTJ3 354 aa27.39■■□□□ 1.98
HOXC9-203ENST00000508190 TRIM35Q9UPQ4 493 aa27.39■■□□□ 1.98
HOXC9-203ENST00000508190 ITGB4P16144 1822 aa27.38■■□□□ 1.97
HOXC9-203ENST00000508190 DCTN1Q14203 1278 aa27.37■■□□□ 1.97
HOXC9-203ENST00000508190 KDM6AO15550 1401 aaPredicted RBP27.37■■□□□ 1.97
HOXC9-203ENST00000508190 MARCH10Q8NA82 808 aaPredicted RBP27.36■■□□□ 1.97
HOXC9-203ENST00000508190 SIPA1L3O60292 1781 aaPredicted RBP27.36■■□□□ 1.97
HOXC9-203ENST00000508190 MPRIPQ6WCQ1 1025 aa27.36■■□□□ 1.97
HOXC9-203ENST00000508190 MCM10Q7L590 875 aa27.36■■□□□ 1.97
HOXC9-203ENST00000508190 THUMPD2Q9BTF0 503 aaKnown RBP27.36■■□□□ 1.97
HOXC9-203ENST00000508190 SBF2Q86WG5 1849 aa27.34■■□□□ 1.97
HOXC9-203ENST00000508190 PDE3BQ13370 1112 aa27.34■■□□□ 1.97
HOXC9-203ENST00000508190 LGR6Q9HBX8 967 aa27.34■■□□□ 1.97
HOXC9-203ENST00000508190 LMOD3Q0VAK6 560 aa27.33■■□□□ 1.97
HOXC9-203ENST00000508190 RTF1Q92541 710 aaKnown RBP27.33■■□□□ 1.97
HOXC9-203ENST00000508190 CCDC27Q2M243 656 aa27.32■■□□□ 1.96
HOXC9-203ENST00000508190 WWC1Q8IX03 1113 aa27.32■■□□□ 1.96
HOXC9-203ENST00000508190 IL17REQ8NFR9 667 aa27.32■■□□□ 1.96
HOXC9-203ENST00000508190 RNMTO43148 476 aaKnown RBP27.31■■□□□ 1.96
HOXC9-203ENST00000508190 HTATSF1O43719 755 aaKnown RBP27.31■■□□□ 1.96
HOXC9-203ENST00000508190 NKX1-1Q15270 411 aaPredicted RBP27.31■■□□□ 1.96
HOXC9-203ENST00000508190 NCBP3Q53F19 620 aaKnown RBP27.31■■□□□ 1.96
HOXC9-203ENST00000508190 FAM182BQ5T319 152 aa27.31■■□□□ 1.96
HOXC9-203ENST00000508190 NGEFQ8N5V2 710 aa27.31■■□□□ 1.96
HOXC9-203ENST00000508190 HSP90AB1P08238 724 aaKnown RBP27.3■■□□□ 1.96
HOXC9-203ENST00000508190 DCAF5Q96JK2 942 aa27.3■■□□□ 1.96
HOXC9-203ENST00000508190 ZNF521Q96K83 1311 aa27.3■■□□□ 1.96
HOXC9-203ENST00000508190 CEMIPQ8WUJ3 1361 aa27.3■■□□□ 1.96
HOXC9-203ENST00000508190 ZBED9Q6R2W3 1325 aa27.29■■□□□ 1.96
HOXC9-203ENST00000508190 MRC1P22897 1456 aa27.28■■□□□ 1.96
HOXC9-203ENST00000508190 KRT27Q7Z3Y8 459 aa27.28■■□□□ 1.96
HOXC9-203ENST00000508190 NHSQ6T4R5 1651 aa27.24■■□□□ 1.95
HOXC9-203ENST00000508190 KDM3BQ7LBC6 1761 aa27.24■■□□□ 1.95
HOXC9-203ENST00000508190 EP400Q96L91 3159 aa27.23■■□□□ 1.95
HOXC9-203ENST00000508190 ACSBG1Q96GR2 724 aa27.22■■□□□ 1.95
HOXC9-203ENST00000508190 SLC52A2Q9HAB3 445 aa27.21■■□□□ 1.95
HOXC9-203ENST00000508190 TEFQ10587 303 aa27.21■■□□□ 1.95
HOXC9-203ENST00000508190 WDR63Q8IWG1 891 aa27.21■■□□□ 1.95
HOXC9-203ENST00000508190 SPINK5Q9NQ38 1064 aaPredicted RBP27.21■■□□□ 1.95
HOXC9-203ENST00000508190 BCL9O00512 1426 aa27.2■■□□□ 1.94
HOXC9-203ENST00000508190 PAPPAQ13219 1627 aa27.2■■□□□ 1.94
HOXC9-203ENST00000508190 ERVV-2B6SEH9 535 aa27.2■■□□□ 1.94
HOXC9-203ENST00000508190 BTAF1O14981 1849 aa27.2■■□□□ 1.94
HOXC9-203ENST00000508190 CABP4P57796 275 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms