RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 USP17L10C9JJH3 530 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 USP17L13C9JLJ4 530 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 USP17L12C9JPN9 530 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 USP17L11C9JVI0 530 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 USP17L21D6R901 530 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 USP17L18D6R9N7 530 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 USP17L22D6RA61 530 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 USP17L17D6RBQ6 530 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 USP17L19D6RCP7 530 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 USP17L20D6RJB6 530 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 SCNN1DP51172 638 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 GTF2IP78347 998 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 USP17L24Q0WX57 530 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 TRIM26Q12899 539 aaPredicted RBP5.35□□□□□ -1.55
CCDC30-212ENST00000507855 CCDC116Q8IYX3 515 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.35□□□□□ -1.55
CCDC30-212ENST00000507855 TMEM229AB2RXF0 380 aa5.34□□□□□ -1.55
CCDC30-212ENST00000507855 TBCELQ5QJ74 424 aa5.34□□□□□ -1.55
CCDC30-212ENST00000507855 PLEKHM2Q8IWE5 1019 aa5.34□□□□□ -1.55
CCDC30-212ENST00000507855 NFATC2IPQ8NCF5 419 aa5.34□□□□□ -1.55
CCDC30-212ENST00000507855 TPCN2Q8NHX9 752 aa5.34□□□□□ -1.55
CCDC30-212ENST00000507855 DACH1Q9UI36 760 aa5.34□□□□□ -1.55
CCDC30-212ENST00000507855 NOVA2Q9UNW9 492 aaKnown RBP5.34□□□□□ -1.55
CCDC30-212ENST00000507855 TTC24A2A3L6 582 aaPredicted RBP5.34□□□□□ -1.56
CCDC30-212ENST00000507855 TIMP2P16035 220 aa5.34□□□□□ -1.56
CCDC30-212ENST00000507855 ERVK-9P63128 1117 aa5.34□□□□□ -1.56
CCDC30-212ENST00000507855 PHLDB3Q6NSJ2 640 aa5.34□□□□□ -1.56
CCDC30-212ENST00000507855 TSEN2Q8NCE0 465 aaKnown RBP5.34□□□□□ -1.56
CCDC30-212ENST00000507855 ZNF395Q9H8N7 513 aaPredicted RBP5.34□□□□□ -1.56
CCDC30-212ENST00000507855 ZIC2O95409 532 aaPredicted RBP5.33□□□□□ -1.56
CCDC30-212ENST00000507855 BMP1P13497 986 aa5.33□□□□□ -1.56
CCDC30-212ENST00000507855 WDR4P57081 412 aaKnown RBP5.33□□□□□ -1.56
CCDC30-212ENST00000507855 CCDC102BQ68D86 513 aa5.33□□□□□ -1.56
CCDC30-212ENST00000507855 SNIP1Q8TAD8 396 aaKnown RBP5.33□□□□□ -1.56
CCDC30-212ENST00000507855 PDZRN3Q9UPQ7 1066 aa5.33□□□□□ -1.56
CCDC30-212ENST00000507855 LCE2BO14633 110 aa5.33□□□□□ -1.56
CCDC30-212ENST00000507855 EML3Q32P44 896 aa5.33□□□□□ -1.56
CCDC30-212ENST00000507855 ETNK1Q9HBU6 452 aa5.33□□□□□ -1.56
CCDC30-212ENST00000507855 ARHGEF10LQ9HCE6 1279 aa5.33□□□□□ -1.56
CCDC30-212ENST00000507855 ATG7O95352 703 aa5.32□□□□□ -1.56
CCDC30-212ENST00000507855 RANGAP1P46060 587 aaPredicted RBP5.32□□□□□ -1.56
CCDC30-212ENST00000507855 CYP4X1Q8N118 509 aa5.32□□□□□ -1.56
CCDC30-212ENST00000507855 KLRG1Q96E93 195 aa5.32□□□□□ -1.56
CCDC30-212ENST00000507855 RELBQ01201 579 aa5.32□□□□□ -1.56
CCDC30-212ENST00000507855 PSME1Q06323 249 aa5.32□□□□□ -1.56
CCDC30-212ENST00000507855 PRIMPOLQ96LW4 560 aa5.32□□□□□ -1.56
CCDC30-212ENST00000507855 DNAAF2Q9NVR5 837 aaKnown RBP5.32□□□□□ -1.56
CCDC30-212ENST00000507855 SERTAD1Q9UHV2 236 aa5.32□□□□□ -1.56
CCDC30-212ENST00000507855 WASF2Q9Y6W5 498 aa5.32□□□□□ -1.56
CCDC30-212ENST00000507855 ST8SIA5O15466 376 aa5.31□□□□□ -1.56
CCDC30-212ENST00000507855 MAP7D1Q3KQU3 841 aa5.31□□□□□ -1.56
CCDC30-212ENST00000507855 TNS4Q8IZW8 715 aa5.31□□□□□ -1.56
CCDC30-212ENST00000507855 FAM196BA6NMK8 535 aa5.31□□□□□ -1.56
CCDC30-212ENST00000507855 PRMT3O60678 531 aa5.31□□□□□ -1.56
CCDC30-212ENST00000507855 IL2RAP01589 272 aa5.31□□□□□ -1.56
CCDC30-212ENST00000507855 NR5A1Q13285 461 aa5.31□□□□□ -1.56
CCDC30-212ENST00000507855 SH3PXD2AQ5TCZ1 1133 aa5.31□□□□□ -1.56
CCDC30-212ENST00000507855 ANKMY2Q8IV38 441 aa5.31□□□□□ -1.56
CCDC30-212ENST00000507855 SEPT12Q8IYM1 358 aa5.31□□□□□ -1.56
CCDC30-212ENST00000507855 NOD1Q9Y239 953 aa5.31□□□□□ -1.56
CCDC30-212ENST00000507855 CC2D2BQ6DHV5 1058 aa5.3□□□□□ -1.56
CCDC30-212ENST00000507855 MPNDQ8N594 471 aa5.3□□□□□ -1.56
CCDC30-212ENST00000507855 USP4Q13107 963 aa5.29□□□□□ -1.56
CCDC30-212ENST00000507855 FAM187AA6NFU0 413 aa5.29□□□□□ -1.56
CCDC30-212ENST00000507855 C21orf2O43822 256 aa5.29□□□□□ -1.56
CCDC30-212ENST00000507855 PPP1R15AO75807 674 aaPredicted RBP5.29□□□□□ -1.56
CCDC30-212ENST00000507855 PRR20EP86478 221 aa5.29□□□□□ -1.56
CCDC30-212ENST00000507855 PRR20CP86479 221 aa5.29□□□□□ -1.56
CCDC30-212ENST00000507855 PRR20DP86480 221 aa5.29□□□□□ -1.56
CCDC30-212ENST00000507855 PRR20BP86481 221 aa5.29□□□□□ -1.56
CCDC30-212ENST00000507855 PRR20AP86496 221 aa5.29□□□□□ -1.56
CCDC30-212ENST00000507855 AEBP1Q8IUX7 1158 aa5.29□□□□□ -1.56
CCDC30-212ENST00000507855 UBE2Q2Q8WVN8 375 aa5.29□□□□□ -1.56
CCDC30-212ENST00000507855 ZNF358Q9NW07 568 aa5.29□□□□□ -1.56
CCDC30-212ENST00000507855 A0A1W2PRU2 124 aa5.28□□□□□ -1.56
CCDC30-212ENST00000507855 ATP5J2-PTCD1G3V325 749 aa5.28□□□□□ -1.56
CCDC30-212ENST00000507855 RNF20Q5VTR2 975 aa5.28□□□□□ -1.56
CCDC30-212ENST00000507855 PARP3Q9Y6F1 533 aa5.28□□□□□ -1.56
CCDC30-212ENST00000507855 SOBPA7XYQ1 873 aa5.28□□□□□ -1.56
CCDC30-212ENST00000507855 GDF10P55107 478 aa5.28□□□□□ -1.56
CCDC30-212ENST00000507855 MCCD1P59942 119 aaPredicted RBP5.28□□□□□ -1.56
CCDC30-212ENST00000507855 OCLNQ16625 522 aa5.28□□□□□ -1.56
CCDC30-212ENST00000507855 SIX5Q8N196 739 aa5.28□□□□□ -1.56
CCDC30-212ENST00000507855 INSM2Q96T92 566 aaPredicted RBP5.28□□□□□ -1.56
CCDC30-212ENST00000507855 TSPAN10Q9H1Z9 355 aaPredicted RBP5.28□□□□□ -1.56
CCDC30-212ENST00000507855 CDV3Q9UKY7 258 aaKnown RBP5.28□□□□□ -1.56
CCDC30-212ENST00000507855 GFRA3O60609 400 aa5.27□□□□□ -1.57
CCDC30-212ENST00000507855 CTSOP43234 321 aaPredicted RBP5.27□□□□□ -1.57
CCDC30-212ENST00000507855 EPHA4P54764 986 aa5.27□□□□□ -1.57
CCDC30-212ENST00000507855 C6orf118Q5T5N4 469 aa5.27□□□□□ -1.57
CCDC30-212ENST00000507855 LARP1Q6PKG0 1096 aaKnown RBP5.27□□□□□ -1.57
CCDC30-212ENST00000507855 Q6ZVU0 165 aa5.27□□□□□ -1.57
CCDC30-212ENST00000507855 MKNK1Q9BUB5 465 aa5.27□□□□□ -1.57
CCDC30-212ENST00000507855 MTMR3Q13615 1198 aa5.27□□□□□ -1.57
CCDC30-212ENST00000507855 TRIM46Q7Z4K8 759 aa5.27□□□□□ -1.57
CCDC30-212ENST00000507855 FAM200AQ8TCP9 573 aa5.27□□□□□ -1.57
CCDC30-212ENST00000507855 CNKSR1Q969H4 720 aa5.27□□□□□ -1.57
CCDC30-212ENST00000507855 EMILIN1Q9Y6C2 1016 aa5.27□□□□□ -1.57
CCDC30-212ENST00000507855 LARGE2Q8N3Y3 721 aa5.26□□□□□ -1.57
CCDC30-212ENST00000507855 SEPT3Q9UH03 358 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms