RNA–Protein interactions for RNA: ENST00000507123.1

SH3TC1-211, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-211ENST00000507123 USHBP1Q8N6Y0 703 aa23.37■■□□□ 1.33
SH3TC1-211ENST00000507123 ZCRB1Q8TBF4 217 aaKnown RBP23.37■■□□□ 1.33
SH3TC1-211ENST00000507123 EMILIN1Q9Y6C2 1016 aa23.37■■□□□ 1.33
SH3TC1-211ENST00000507123 KAT6BQ8WYB5 2073 aa23.36■■□□□ 1.33
SH3TC1-211ENST00000507123 SPON1Q9HCB6 807 aa23.36■■□□□ 1.33
SH3TC1-211ENST00000507123 SLC15A2Q16348 729 aa23.34■■□□□ 1.33
SH3TC1-211ENST00000507123 POLR3GLQ9BT43 218 aa23.34■■□□□ 1.33
SH3TC1-211ENST00000507123 STK32BQ9NY57 414 aa23.34■■□□□ 1.33
SH3TC1-211ENST00000507123 NCAPD2Q15021 1401 aa23.33■■□□□ 1.33
SH3TC1-211ENST00000507123 NSD2O96028 1365 aa23.33■■□□□ 1.33
SH3TC1-211ENST00000507123 PDGFDQ9GZP0 370 aaPredicted RBP23.33■■□□□ 1.33
SH3TC1-211ENST00000507123 RAPGEF4Q8WZA2 1011 aa23.32■■□□□ 1.32
SH3TC1-211ENST00000507123 MAP2P11137 1827 aaKnown RBP23.31■■□□□ 1.32
SH3TC1-211ENST00000507123 TATP17735 454 aaPredicted RBP23.3■■□□□ 1.32
SH3TC1-211ENST00000507123 WASHC2AQ641Q2 1341 aa23.3■■□□□ 1.32
SH3TC1-211ENST00000507123 PRIM1P49642 420 aaKnown RBP23.29■■□□□ 1.32
SH3TC1-211ENST00000507123 PKD1L3Q7Z443 1732 aa23.29■■□□□ 1.32
SH3TC1-211ENST00000507123 LRRC4BQ9NT99 713 aa23.29■■□□□ 1.32
SH3TC1-211ENST00000507123 PCDH11XQ9BZA7 1347 aa23.28■■□□□ 1.32
SH3TC1-211ENST00000507123 PCDH11YQ9BZA8 1340 aa23.28■■□□□ 1.32
SH3TC1-211ENST00000507123 LY75O60449 1722 aa23.28■■□□□ 1.32
SH3TC1-211ENST00000507123 PPM1GO15355 546 aaPredicted RBP23.27■■□□□ 1.32
SH3TC1-211ENST00000507123 SLC27A3Q5K4L6 730 aa23.27■■□□□ 1.32
SH3TC1-211ENST00000507123 SYTL4Q96C24 671 aaPredicted RBP23.27■■□□□ 1.32
SH3TC1-211ENST00000507123 PANK3Q9H999 370 aa23.27■■□□□ 1.32
SH3TC1-211ENST00000507123 POLKQ9UBT6 870 aa23.27■■□□□ 1.32
SH3TC1-211ENST00000507123 ZBTB7AO95365 584 aa23.26■■□□□ 1.31
SH3TC1-211ENST00000507123 ZNF827Q17R98 1081 aa23.26■■□□□ 1.31
SH3TC1-211ENST00000507123 PPP1R1BQ9UD71 204 aaPredicted RBP23.26■■□□□ 1.31
SH3TC1-211ENST00000507123 PTGER2P43116 358 aa23.24■■□□□ 1.31
SH3TC1-211ENST00000507123 QSER1Q2KHR3 1735 aa23.23■■□□□ 1.31
SH3TC1-211ENST00000507123 TOGARAM1Q9Y4F4 1720 aa23.22■■□□□ 1.31
SH3TC1-211ENST00000507123 CYP27B1O15528 508 aa23.22■■□□□ 1.31
SH3TC1-211ENST00000507123 AKT1S1Q96B36 256 aa23.22■■□□□ 1.31
SH3TC1-211ENST00000507123 TNNT2P45379 298 aaPredicted RBP23.21■■□□□ 1.31
SH3TC1-211ENST00000507123 EYA1Q99502 592 aa23.21■■□□□ 1.31
SH3TC1-211ENST00000507123 MTFR1LQ9H019 292 aa23.21■■□□□ 1.31
SH3TC1-211ENST00000507123 TUBGCP6Q96RT7 1819 aa23.19■■□□□ 1.3
SH3TC1-211ENST00000507123 SGIP1Q9BQI5 828 aa23.19■■□□□ 1.3
SH3TC1-211ENST00000507123 ATF5Q9Y2D1 282 aaPredicted RBP23.19■■□□□ 1.3
SH3TC1-211ENST00000507123 KCNQ4P56696 695 aa23.18■■□□□ 1.3
SH3TC1-211ENST00000507123 EIF4A2Q14240 407 aaKnown RBP23.18■■□□□ 1.3
SH3TC1-211ENST00000507123 PLEKHG2Q9H7P9 1386 aa23.16■■□□□ 1.3
SH3TC1-211ENST00000507123 KIF7Q2M1P5 1343 aa23.16■■□□□ 1.3
SH3TC1-211ENST00000507123 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.16■■□□□ 1.3
SH3TC1-211ENST00000507123 CCNL1Q9UK58 526 aaPredicted RBP23.16■■□□□ 1.3
SH3TC1-211ENST00000507123 ITGB4P16144 1822 aa23.16■■□□□ 1.3
SH3TC1-211ENST00000507123 PNPLA7Q6ZV29 1317 aa23.15■■□□□ 1.3
SH3TC1-211ENST00000507123 NKX1-1Q15270 411 aaPredicted RBP23.15■■□□□ 1.3
SH3TC1-211ENST00000507123 SPG7Q9UQ90 795 aa23.15■■□□□ 1.3
SH3TC1-211ENST00000507123 IGSF1Q8N6C5 1336 aa23.14■■□□□ 1.3
SH3TC1-211ENST00000507123 COL24A1Q17RW2 1714 aa23.13■■□□□ 1.29
SH3TC1-211ENST00000507123 C5P01031 1676 aa23.13■■□□□ 1.29
SH3TC1-211ENST00000507123 KNSTRNQ9Y448 316 aa23.13■■□□□ 1.29
SH3TC1-211ENST00000507123 PALLDQ8WX93 1383 aa23.13■■□□□ 1.29
SH3TC1-211ENST00000507123 MPRIPQ6WCQ1 1025 aa23.12■■□□□ 1.29
SH3TC1-211ENST00000507123 MORC1Q86VD1 984 aa23.12■■□□□ 1.29
SH3TC1-211ENST00000507123 SLC16A10Q8TF71 515 aa23.11■■□□□ 1.29
SH3TC1-211ENST00000507123 TFCP2L1Q9NZI6 479 aa23.11■■□□□ 1.29
SH3TC1-211ENST00000507123 AMER1Q5JTC6 1135 aaPredicted RBP23.1■■□□□ 1.29
SH3TC1-211ENST00000507123 TAF1LQ8IZX4 1826 aa23.1■■□□□ 1.29
SH3TC1-211ENST00000507123 UTRNP46939 3433 aa23.09■■□□□ 1.29
SH3TC1-211ENST00000507123 PHKG2P15735 406 aa23.08■■□□□ 1.29
SH3TC1-211ENST00000507123 PIGBQ92521 554 aa23.08■■□□□ 1.29
SH3TC1-211ENST00000507123 FHDC1Q9C0D6 1143 aaPredicted RBP23.08■■□□□ 1.29
SH3TC1-211ENST00000507123 MAP3K5Q99683 1374 aa23.07■■□□□ 1.28
SH3TC1-211ENST00000507123 IFNL2Q8IZJ0 200 aa23.07■■□□□ 1.28
SH3TC1-211ENST00000507123 SMARCC1Q92922 1105 aaPredicted RBP23.07■■□□□ 1.28
SH3TC1-211ENST00000507123 ARXQ96QS3 562 aa23.07■■□□□ 1.28
SH3TC1-211ENST00000507123 SYT17Q9BSW7 474 aa23.06■■□□□ 1.28
SH3TC1-211ENST00000507123 C4BP0C0L5 1744 aa23.04■■□□□ 1.28
SH3TC1-211ENST00000507123 PER1O15534 1290 aaPredicted RBP23.03■■□□□ 1.28
SH3TC1-211ENST00000507123 HMGB2P26583 209 aaKnown RBP23.03■■□□□ 1.28
SH3TC1-211ENST00000507123 TMOD3Q9NYL9 352 aa23.03■■□□□ 1.28
SH3TC1-211ENST00000507123 DCAF8L1A6NGE4 600 aa23.02■■□□□ 1.28
SH3TC1-211ENST00000507123 COL23A1Q86Y22 540 aaPredicted RBP23.02■■□□□ 1.28
SH3TC1-211ENST00000507123 KDRP35968 1356 aa23.01■■□□□ 1.27
SH3TC1-211ENST00000507123 AEBP1Q8IUX7 1158 aa23.01■■□□□ 1.27
SH3TC1-211ENST00000507123 POLD1P28340 1107 aa23■■□□□ 1.27
SH3TC1-211ENST00000507123 IL13P35225 146 aa23■■□□□ 1.27
SH3TC1-211ENST00000507123 PLEKHO1Q53GL0 409 aaPredicted RBP22.99■■□□□ 1.27
SH3TC1-211ENST00000507123 KDM6AO15550 1401 aaPredicted RBP22.99■■□□□ 1.27
SH3TC1-211ENST00000507123 UBR3Q6ZT12 1888 aa22.98■■□□□ 1.27
SH3TC1-211ENST00000507123 LOC102724428A0A0B4J2F2 783 aa22.98■■□□□ 1.27
SH3TC1-211ENST00000507123 SIK1P57059 783 aa22.98■■□□□ 1.27
SH3TC1-211ENST00000507123 AMOTQ4VCS5 1084 aa22.98■■□□□ 1.27
SH3TC1-211ENST00000507123 ASAP1Q9ULH1 1129 aa22.98■■□□□ 1.27
SH3TC1-211ENST00000507123 HSP90AB1P08238 724 aaKnown RBP22.97■■□□□ 1.27
SH3TC1-211ENST00000507123 ZNF530Q6P9A1 599 aaPredicted RBP22.97■■□□□ 1.27
SH3TC1-211ENST00000507123 DCAF5Q96JK2 942 aa22.97■■□□□ 1.27
SH3TC1-211ENST00000507123 ERVV-2B6SEH9 535 aa22.96■■□□□ 1.27
SH3TC1-211ENST00000507123 MSH5O43196 834 aa22.96■■□□□ 1.27
SH3TC1-211ENST00000507123 YY1P25490 414 aa22.96■■□□□ 1.27
SH3TC1-211ENST00000507123 SULT6B1Q6IMI4 303 aa22.96■■□□□ 1.27
SH3TC1-211ENST00000507123 FLAD1Q8NFF5 587 aa22.96■■□□□ 1.27
SH3TC1-211ENST00000507123 NPC1L1Q9UHC9 1359 aa22.96■■□□□ 1.27
SH3TC1-211ENST00000507123 AMIGO3Q86WK7 504 aa22.95■■□□□ 1.26
SH3TC1-211ENST00000507123 LINC00116Q8NCU8 138 aa22.95■■□□□ 1.26
SH3TC1-211ENST00000507123 AK7Q96M32 723 aa22.95■■□□□ 1.26
SH3TC1-211ENST00000507123 ATG3Q9NT62 314 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms