RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 HSP90AB2PQ58FF8 381 aa12.55□□□□□ -0.4
PDLIM5-209ENST00000506632 EMILIN1Q9Y6C2 1016 aa12.55□□□□□ -0.4
PDLIM5-209ENST00000506632 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
PDLIM5-209ENST00000506632 AMER1Q5JTC6 1135 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-209ENST00000506632 NBPF14Q5TI25 921 aa12.54□□□□□ -0.4
PDLIM5-209ENST00000506632 POLR3GLQ9BT43 218 aa12.54□□□□□ -0.4
PDLIM5-209ENST00000506632 BTAF1O14981 1849 aa12.53□□□□□ -0.4
PDLIM5-209ENST00000506632 ACSBG1Q96GR2 724 aa12.53□□□□□ -0.4
PDLIM5-209ENST00000506632 ANO8Q9HCE9 1232 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-209ENST00000506632 MAP2P11137 1827 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-209ENST00000506632 TXNRD1Q16881 649 aa12.52□□□□□ -0.41
PDLIM5-209ENST00000506632 USHBP1Q8N6Y0 703 aa12.52□□□□□ -0.41
PDLIM5-209ENST00000506632 PANK3Q9H999 370 aa12.52□□□□□ -0.41
PDLIM5-209ENST00000506632 POLKQ9UBT6 870 aa12.52□□□□□ -0.41
PDLIM5-209ENST00000506632 WASHC2AQ641Q2 1341 aa12.52□□□□□ -0.41
PDLIM5-209ENST00000506632 ZCRB1Q8TBF4 217 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-209ENST00000506632 DDX54Q8TDD1 881 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-209ENST00000506632 NSD2O96028 1365 aa12.51□□□□□ -0.41
PDLIM5-209ENST00000506632 PAPPAQ13219 1627 aa12.51□□□□□ -0.41
PDLIM5-209ENST00000506632 DOT1LQ8TEK3 1739 aa12.51□□□□□ -0.41
PDLIM5-209ENST00000506632 KIF7Q2M1P5 1343 aa12.5□□□□□ -0.41
PDLIM5-209ENST00000506632 CASZ1Q86V15 1759 aa12.5□□□□□ -0.41
PDLIM5-209ENST00000506632 PKD1L3Q7Z443 1732 aa12.49□□□□□ -0.41
PDLIM5-209ENST00000506632 RAPGEF4Q8WZA2 1011 aa12.49□□□□□ -0.41
PDLIM5-209ENST00000506632 KAT6BQ8WYB5 2073 aa12.49□□□□□ -0.41
PDLIM5-209ENST00000506632 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-209ENST00000506632 PPM1GO15355 546 aaPredicted RBP12.47□□□□□ -0.41
PDLIM5-209ENST00000506632 PCDH11XQ9BZA7 1347 aa12.46□□□□□ -0.41
PDLIM5-209ENST00000506632 PCDH11YQ9BZA8 1340 aa12.46□□□□□ -0.41
PDLIM5-209ENST00000506632 CYP27B1O15528 508 aa12.46□□□□□ -0.41
PDLIM5-209ENST00000506632 PRIM1P49642 420 aaKnown RBP12.46□□□□□ -0.41
PDLIM5-209ENST00000506632 EIF4A2Q14240 407 aaKnown RBP12.46□□□□□ -0.41
PDLIM5-209ENST00000506632 SLC15A2Q16348 729 aa12.46□□□□□ -0.41
PDLIM5-209ENST00000506632 EYA1Q99502 592 aa12.46□□□□□ -0.41
PDLIM5-209ENST00000506632 LRRC4BQ9NT99 713 aa12.46□□□□□ -0.41
PDLIM5-209ENST00000506632 LY75O60449 1722 aa12.45□□□□□ -0.42
PDLIM5-209ENST00000506632 PLEKHG2Q9H7P9 1386 aa12.45□□□□□ -0.42
PDLIM5-209ENST00000506632 TNNT2P45379 298 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-209ENST00000506632 PDGFDQ9GZP0 370 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-209ENST00000506632 STK32BQ9NY57 414 aa12.45□□□□□ -0.42
PDLIM5-209ENST00000506632 KNSTRNQ9Y448 316 aa12.45□□□□□ -0.42
PDLIM5-209ENST00000506632 TOGARAM1Q9Y4F4 1720 aa12.45□□□□□ -0.42
PDLIM5-209ENST00000506632 IGSF1Q8N6C5 1336 aa12.44□□□□□ -0.42
PDLIM5-209ENST00000506632 PER1O15534 1290 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-209ENST00000506632 SLC27A3Q5K4L6 730 aa12.44□□□□□ -0.42
PDLIM5-209ENST00000506632 SPON1Q9HCB6 807 aa12.44□□□□□ -0.42
PDLIM5-209ENST00000506632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.44□□□□□ -0.421e-6■■■■□ 25
PDLIM5-209ENST00000506632 NKX1-1Q15270 411 aaPredicted RBP12.43□□□□□ -0.42
PDLIM5-209ENST00000506632 MORC1Q86VD1 984 aa12.43□□□□□ -0.42
PDLIM5-209ENST00000506632 SYTL4Q96C24 671 aaPredicted RBP12.43□□□□□ -0.42
PDLIM5-209ENST00000506632 ZNF827Q17R98 1081 aa12.42□□□□□ -0.42
PDLIM5-209ENST00000506632 AKT1S1Q96B36 256 aa12.42□□□□□ -0.42
PDLIM5-209ENST00000506632 QSER1Q2KHR3 1735 aa12.42□□□□□ -0.42
PDLIM5-209ENST00000506632 SPG7Q9UQ90 795 aa12.41□□□□□ -0.42
PDLIM5-209ENST00000506632 ITGB4P16144 1822 aa12.41□□□□□ -0.42
PDLIM5-209ENST00000506632 PTGER2P43116 358 aa12.4□□□□□ -0.42
PDLIM5-209ENST00000506632 NPC1L1Q9UHC9 1359 aa12.4□□□□□ -0.42
PDLIM5-209ENST00000506632 TUBGCP6Q96RT7 1819 aa12.39□□□□□ -0.43
PDLIM5-209ENST00000506632 ZBTB7AO95365 584 aa12.39□□□□□ -0.43
PDLIM5-209ENST00000506632 SGIP1Q9BQI5 828 aa12.39□□□□□ -0.43
PDLIM5-209ENST00000506632 PHKG2P15735 406 aa12.38□□□□□ -0.43
PDLIM5-209ENST00000506632 KCNQ4P56696 695 aa12.38□□□□□ -0.43
PDLIM5-209ENST00000506632 MTFR1LQ9H019 292 aa12.38□□□□□ -0.43
PDLIM5-209ENST00000506632 CCNL1Q9UK58 526 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-209ENST00000506632 KDRP35968 1356 aa12.38□□□□□ -0.43
PDLIM5-209ENST00000506632 COL24A1Q17RW2 1714 aa12.37□□□□□ -0.43
PDLIM5-209ENST00000506632 IL13P35225 146 aa12.37□□□□□ -0.43
PDLIM5-209ENST00000506632 MPRIPQ6WCQ1 1025 aa12.37□□□□□ -0.43
PDLIM5-209ENST00000506632 IFNL2Q8IZJ0 200 aa12.37□□□□□ -0.43
PDLIM5-209ENST00000506632 PIGBQ92521 554 aa12.37□□□□□ -0.43
PDLIM5-209ENST00000506632 PALLDQ8WX93 1383 aa12.37□□□□□ -0.43
PDLIM5-209ENST00000506632 PNPLA7Q6ZV29 1317 aa12.37□□□□□ -0.43
PDLIM5-209ENST00000506632 C5P01031 1676 aa12.36□□□□□ -0.43
PDLIM5-209ENST00000506632 AEBP1Q8IUX7 1158 aa12.36□□□□□ -0.43
PDLIM5-209ENST00000506632 ATF5Q9Y2D1 282 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-209ENST00000506632 TAF1LQ8IZX4 1826 aa12.36□□□□□ -0.43
PDLIM5-209ENST00000506632 MTHFSP49914 203 aa12.35□□□□□ -0.43
PDLIM5-209ENST00000506632 SLC16A10Q8TF71 515 aa12.35□□□□□ -0.43
PDLIM5-209ENST00000506632 SMARCC1Q92922 1105 aaPredicted RBP12.35□□□□□ -0.43
PDLIM5-209ENST00000506632 PPP1R1BQ9UD71 204 aaPredicted RBP12.35□□□□□ -0.43
PDLIM5-209ENST00000506632 PLEKHO1Q53GL0 409 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-209ENST00000506632 CC2D1BQ5T0F9 858 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-209ENST00000506632 KDM6AO15550 1401 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-209ENST00000506632 COL3A1P02461 1466 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-209ENST00000506632 AMOTQ4VCS5 1084 aa12.33□□□□□ -0.44
PDLIM5-209ENST00000506632 SULT6B1Q6IMI4 303 aa12.33□□□□□ -0.44
PDLIM5-209ENST00000506632 TMOD3Q9NYL9 352 aa12.33□□□□□ -0.44
PDLIM5-209ENST00000506632 TFCP2L1Q9NZI6 479 aa12.33□□□□□ -0.44
PDLIM5-209ENST00000506632 C4BP0C0L5 1744 aa12.32□□□□□ -0.44
PDLIM5-209ENST00000506632 ERVV-2B6SEH9 535 aa12.32□□□□□ -0.44
PDLIM5-209ENST00000506632 HSP90AB1P08238 724 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-209ENST00000506632 HMGB2P26583 209 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-209ENST00000506632 ZNF530Q6P9A1 599 aaPredicted RBP12.32□□□□□ -0.44
PDLIM5-209ENST00000506632 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
PDLIM5-209ENST00000506632 MAP3K5Q99683 1374 aa12.31□□□□□ -0.44
PDLIM5-209ENST00000506632 ASAP1Q9ULH1 1129 aa12.31□□□□□ -0.44
PDLIM5-209ENST00000506632 ZNF831Q5JPB2 1677 aa12.31□□□□□ -0.44
PDLIM5-209ENST00000506632 UBR3Q6ZT12 1888 aa12.3□□□□□ -0.44
PDLIM5-209ENST00000506632 LOC102724428A0A0B4J2F2 783 aa12.3□□□□□ -0.44
PDLIM5-209ENST00000506632 SIK1P57059 783 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms