RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 NSD3Q9BZ95 1437 aa34.3■■■■□ 3.08
HERC4-212ENST00000505760 USHBP1Q8N6Y0 703 aa34.29■■■■□ 3.08
HERC4-212ENST00000505760 CARD14Q9BXL6 1004 aa34.29■■■■□ 3.08
HERC4-212ENST00000505760 FLT4P35916 1363 aa34.28■■■■□ 3.08
HERC4-212ENST00000505760 PTGER2P43116 358 aa34.28■■■■□ 3.08
HERC4-212ENST00000505760 PRIM1P49642 420 aaKnown RBP34.28■■■■□ 3.08
HERC4-212ENST00000505760 HSP90AB2PQ58FF8 381 aa34.28■■■■□ 3.08
HERC4-212ENST00000505760 RAPGEF4Q8WZA2 1011 aa34.28■■■■□ 3.08
HERC4-212ENST00000505760 MTFR1LQ9H019 292 aa34.28■■■■□ 3.08
HERC4-212ENST00000505760 LRRC4BQ9NT99 713 aa34.28■■■■□ 3.08
HERC4-212ENST00000505760 INSRP06213 1382 aa34.27■■■■□ 3.08
HERC4-212ENST00000505760 CGNL1Q0VF96 1302 aa34.27■■■■□ 3.08
HERC4-212ENST00000505760 SLC27A3Q5K4L6 730 aa34.26■■■■□ 3.08
HERC4-212ENST00000505760 KIF24Q5T7B8 1368 aa34.25■■■■□ 3.07
HERC4-212ENST00000505760 ZNF827Q17R98 1081 aa34.24■■■■□ 3.07
HERC4-212ENST00000505760 TATP17735 454 aaPredicted RBP34.23■■■■□ 3.07
HERC4-212ENST00000505760 POLR3GLQ9BT43 218 aa34.2■■■■□ 3.07
HERC4-212ENST00000505760 EMILIN1Q9Y6C2 1016 aa34.2■■■■□ 3.07
HERC4-212ENST00000505760 NSD2O96028 1365 aa34.18■■■■□ 3.06
HERC4-212ENST00000505760 PPM1GO15355 546 aaPredicted RBP34.17■■■■□ 3.06
HERC4-212ENST00000505760 LY75O60449 1722 aa34.17■■■■□ 3.06
HERC4-212ENST00000505760 YY1P25490 414 aa34.17■■■■□ 3.06
HERC4-212ENST00000505760 AKT1S1Q96B36 256 aa34.17■■■■□ 3.06
HERC4-212ENST00000505760 KCNQ4P56696 695 aa34.16■■■■□ 3.06
HERC4-212ENST00000505760 SGIP1Q9BQI5 828 aa34.16■■■■□ 3.06
HERC4-212ENST00000505760 PCDH11XQ9BZA7 1347 aa34.15■■■■□ 3.06
HERC4-212ENST00000505760 PCDH11YQ9BZA8 1340 aa34.15■■■■□ 3.06
HERC4-212ENST00000505760 FHDC1Q9C0D6 1143 aaPredicted RBP34.15■■■■□ 3.06
HERC4-212ENST00000505760 QSER1Q2KHR3 1735 aa34.15■■■■□ 3.06
HERC4-212ENST00000505760 TFCP2L1Q9NZI6 479 aa34.13■■■■□ 3.05
HERC4-212ENST00000505760 MAP2P11137 1827 aaKnown RBP34.13■■■■□ 3.05
HERC4-212ENST00000505760 ANKRD26Q9UPS8 1709 aa34.11■■■■□ 3.05
HERC4-212ENST00000505760 ARXQ96QS3 562 aa34.11■■■■□ 3.05
HERC4-212ENST00000505760 SYT17Q9BSW7 474 aa34.11■■■■□ 3.05
HERC4-212ENST00000505760 CCNL1Q9UK58 526 aaPredicted RBP34.11■■■■□ 3.05
HERC4-212ENST00000505760 EIF4G2P78344 907 aaKnown RBP eCLIP34.1■■■■□ 3.05
HERC4-212ENST00000505760 CCER1Q8TC90 406 aaPredicted RBP34.09■■■■□ 3.05
HERC4-212ENST00000505760 SLC16A10Q8TF71 515 aa34.09■■■■□ 3.05
HERC4-212ENST00000505760 TUBGCP6Q96RT7 1819 aa34.09■■■■□ 3.05
HERC4-212ENST00000505760 PNPLA7Q6ZV29 1317 aa34.07■■■■□ 3.05
HERC4-212ENST00000505760 WASHC2AQ641Q2 1341 aa34.06■■■■□ 3.04
HERC4-212ENST00000505760 PKD1L3Q7Z443 1732 aa34.04■■■■□ 3.04
HERC4-212ENST00000505760 CYP27B1O15528 508 aa34.04■■■■□ 3.04
HERC4-212ENST00000505760 HSPA5P11021 654 aaKnown RBP34.04■■■■□ 3.04
HERC4-212ENST00000505760 UTRNP46939 3433 aa34.02■■■■□ 3.04
HERC4-212ENST00000505760 POLD1P28340 1107 aa34.02■■■■□ 3.04
HERC4-212ENST00000505760 MPRIPQ6WCQ1 1025 aa34.02■■■■□ 3.04
HERC4-212ENST00000505760 POLKQ9UBT6 870 aa34.02■■■■□ 3.04
HERC4-212ENST00000505760 NCAPD2Q15021 1401 aa34.02■■■■□ 3.04
HERC4-212ENST00000505760 TNNT2P45379 298 aaPredicted RBP34.01■■■■□ 3.03
HERC4-212ENST00000505760 SPG7Q9UQ90 795 aa34■■■■□ 3.03
HERC4-212ENST00000505760 ITGB4P16144 1822 aa34■■■■□ 3.03
HERC4-212ENST00000505760 EYA1Q99502 592 aa33.99■■■■□ 3.03
HERC4-212ENST00000505760 TOGARAM1Q9Y4F4 1720 aa33.99■■■■□ 3.03
HERC4-212ENST00000505760 MAP3K5Q99683 1374 aa33.98■■■■□ 3.03
HERC4-212ENST00000505760 PALLDQ8WX93 1383 aa33.98■■■■□ 3.03
HERC4-212ENST00000505760 C5P01031 1676 aa33.97■■■■□ 3.03
HERC4-212ENST00000505760 COL24A1Q17RW2 1714 aa33.97■■■■□ 3.03
HERC4-212ENST00000505760 MSH5O43196 834 aa33.97■■■■□ 3.03
HERC4-212ENST00000505760 HMGB2P26583 209 aaKnown RBP33.96■■■■□ 3.03
HERC4-212ENST00000505760 KLHL34Q8N239 644 aa33.96■■■■□ 3.03
HERC4-212ENST00000505760 PANK3Q9H999 370 aa33.96■■■■□ 3.03
HERC4-212ENST00000505760 SMARCC1Q92922 1105 aaPredicted RBP33.93■■■■□ 3.02
HERC4-212ENST00000505760 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.93■■■■□ 3.024e-7■■■□□ 15.5
HERC4-212ENST00000505760 TAF1LQ8IZX4 1826 aa33.93■■■■□ 3.02
HERC4-212ENST00000505760 NKX1-1Q15270 411 aaPredicted RBP33.92■■■■□ 3.02
HERC4-212ENST00000505760 EIF4A2Q14240 407 aaKnown RBP33.91■■■■□ 3.02
HERC4-212ENST00000505760 COL23A1Q86Y22 540 aaPredicted RBP33.91■■■■□ 3.02
HERC4-212ENST00000505760 PIGBQ92521 554 aa33.89■■■■□ 3.02
HERC4-212ENST00000505760 CHD4Q14839 1912 aa33.88■■■■□ 3.01
HERC4-212ENST00000505760 IFNL2Q8IZJ0 200 aa33.86■■■■□ 3.01
HERC4-212ENST00000505760 GPR162Q16538 588 aa33.85■■■■□ 3.01
HERC4-212ENST00000505760 FLAD1Q8NFF5 587 aa33.85■■■■□ 3.01
HERC4-212ENST00000505760 TMOD3Q9NYL9 352 aa33.85■■■■□ 3.01
HERC4-212ENST00000505760 PHKG2P15735 406 aa33.84■■■■□ 3.01
HERC4-212ENST00000505760 C4BP0C0L5 1744 aa33.84■■■■□ 3.01
HERC4-212ENST00000505760 GOLGB1Q14789 3259 aaKnown RBP33.83■■■■□ 3.01
HERC4-212ENST00000505760 MSL1Q68DK7 614 aa33.82■■■■□ 3
HERC4-212ENST00000505760 MORC1Q86VD1 984 aa33.82■■■■□ 3
HERC4-212ENST00000505760 AK7Q96M32 723 aa33.82■■■■□ 3
HERC4-212ENST00000505760 IGSF1Q8N6C5 1336 aa33.8■■■■□ 3
HERC4-212ENST00000505760 PLEKHG2Q9H7P9 1386 aa33.8■■■■□ 3
HERC4-212ENST00000505760 PELP1Q8IZL8 1130 aaKnown RBP33.79■■■■□ 3
HERC4-212ENST00000505760 KNSTRNQ9Y448 316 aa33.79■■■■□ 3
HERC4-212ENST00000505760 LOC102724428A0A0B4J2F2 783 aa33.77■■■■□ 3
HERC4-212ENST00000505760 SIK1P57059 783 aa33.77■■■■□ 3
HERC4-212ENST00000505760 NLGN2Q8NFZ4 835 aa33.77■■■■□ 3
HERC4-212ENST00000505760 ASAP1Q9ULH1 1129 aa33.76■■■□□ 2.99
HERC4-212ENST00000505760 UBR3Q6ZT12 1888 aa33.76■■■□□ 2.99
HERC4-212ENST00000505760 ZNF784Q8NCA9 323 aaPredicted RBP33.74■■■□□ 2.99
HERC4-212ENST00000505760 PHF14O94880 888 aa33.73■■■□□ 2.99
HERC4-212ENST00000505760 PLEKHO1Q53GL0 409 aaPredicted RBP33.73■■■□□ 2.99
HERC4-212ENST00000505760 HSP90AB1P08238 724 aaKnown RBP33.71■■■□□ 2.99
HERC4-212ENST00000505760 ATP6V1AP38606 617 aa33.71■■■□□ 2.99
HERC4-212ENST00000505760 LINC00116Q8NCU8 138 aa33.71■■■□□ 2.99
HERC4-212ENST00000505760 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.7■■■□□ 2.99
HERC4-212ENST00000505760 AMIGO3Q86WK7 504 aa33.7■■■□□ 2.99
HERC4-212ENST00000505760 ATG3Q9NT62 314 aa33.7■■■□□ 2.99
HERC4-212ENST00000505760 ERVV-2B6SEH9 535 aa33.69■■■□□ 2.98
HERC4-212ENST00000505760 DCAF5Q96JK2 942 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms