RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 CSPP1Q1MSJ5 1256 aa6.96□□□□□ -1.3
TRAPPC13-208ENST00000505553 AGBL1Q96MI9 1066 aa6.96□□□□□ -1.3
TRAPPC13-208ENST00000505553 NSFL1CQ9UNZ2 370 aaKnown RBP6.96□□□□□ -1.3
TRAPPC13-208ENST00000505553 ARID3CA6NKF2 412 aa6.95□□□□□ -1.3
TRAPPC13-208ENST00000505553 ERFEQ4G0M1 354 aa6.95□□□□□ -1.3
TRAPPC13-208ENST00000505553 KRBA1A5PL33 1030 aa6.94□□□□□ -1.3
TRAPPC13-208ENST00000505553 NUTM2BA6NNL0 878 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC13-208ENST00000505553 NUTM2EB1AL46 878 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC13-208ENST00000505553 PER1O15534 1290 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC13-208ENST00000505553 NUTM2DQ5VT03 806 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC13-208ENST00000505553 LYSMD3Q7Z3D4 306 aa6.94□□□□□ -1.3
TRAPPC13-208ENST00000505553 NUTM2AQ8IVF1 878 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC13-208ENST00000505553 TRIM22Q8IYM9 498 aa6.94□□□□□ -1.3
TRAPPC13-208ENST00000505553 CUEDC1Q9NWM3 386 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC13-208ENST00000505553 CABLES1Q8TDN4 633 aa6.93□□□□□ -1.3
TRAPPC13-208ENST00000505553 TSC1Q92574 1164 aa6.93□□□□□ -1.3
TRAPPC13-208ENST00000505553 ACDQ96AP0 544 aa6.93□□□□□ -1.3
TRAPPC13-208ENST00000505553 SLC10A4Q96EP9 437 aa6.93□□□□□ -1.3
TRAPPC13-208ENST00000505553 KCTD15Q96SI1 283 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-208ENST00000505553 ZNF395Q9H8N7 513 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-208ENST00000505553 MKL2Q9ULH7 1088 aa6.93□□□□□ -1.3
TRAPPC13-208ENST00000505553 SH3D19Q5HYK7 790 aa6.93□□□□□ -1.3
TRAPPC13-208ENST00000505553 MYSM1Q5VVJ2 828 aa6.93□□□□□ -1.3
TRAPPC13-208ENST00000505553 ZNF837Q96EG3 531 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-208ENST00000505553 TRERF1Q96PN7 1200 aa6.93□□□□□ -1.3
TRAPPC13-208ENST00000505553 TRAK2O60296 914 aa6.92□□□□□ -1.3
TRAPPC13-208ENST00000505553 PDIA4P13667 645 aaKnown RBP6.92□□□□□ -1.3
TRAPPC13-208ENST00000505553 H7C1W4 665 aa6.91□□□□□ -1.3
TRAPPC13-208ENST00000505553 GPR25O00155 361 aa6.91□□□□□ -1.3
TRAPPC13-208ENST00000505553 OIP5O43482 229 aa6.91□□□□□ -1.3
TRAPPC13-208ENST00000505553 TUSC1Q2TAM9 212 aa6.91□□□□□ -1.3
TRAPPC13-208ENST00000505553 LCE3BQ5TA77 95 aa6.91□□□□□ -1.3
TRAPPC13-208ENST00000505553 FOXD4L5Q5VV16 416 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC13-208ENST00000505553 LIMD1Q9UGP4 676 aa6.91□□□□□ -1.3
TRAPPC13-208ENST00000505553 MX2P20592 715 aa6.9□□□□□ -1.31
TRAPPC13-208ENST00000505553 HELBQ8NG08 1087 aaPredicted RBP6.9□□□□□ -1.31
TRAPPC13-208ENST00000505553 ZBTB7CA1YPR0 619 aa6.89□□□□□ -1.31
TRAPPC13-208ENST00000505553 LILRB3O75022 631 aa6.89□□□□□ -1.31
TRAPPC13-208ENST00000505553 ADH1AP07327 375 aa6.89□□□□□ -1.31
TRAPPC13-208ENST00000505553 SKIV2LQ15477 1246 aaKnown RBP6.89□□□□□ -1.31
TRAPPC13-208ENST00000505553 QPCTQ16769 361 aa6.89□□□□□ -1.31
TRAPPC13-208ENST00000505553 INTS6LQ5JSJ4 861 aaKnown RBP6.89□□□□□ -1.31
TRAPPC13-208ENST00000505553 RIPOR1Q6ZS17 1223 aa6.89□□□□□ -1.31
TRAPPC13-208ENST00000505553 CLUAP1Q96AJ1 413 aa6.89□□□□□ -1.31
TRAPPC13-208ENST00000505553 ARHGAP9Q9BRR9 750 aa6.89□□□□□ -1.31
TRAPPC13-208ENST00000505553 PIK3R2O00459 728 aa6.88□□□□□ -1.31
TRAPPC13-208ENST00000505553 PTGIRP43119 386 aa6.88□□□□□ -1.31
TRAPPC13-208ENST00000505553 CLK2P49760 499 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-208ENST00000505553 MCM6Q14566 821 aa6.88□□□□□ -1.31
TRAPPC13-208ENST00000505553 BTBD11A6QL63 1104 aa6.87□□□□□ -1.31
TRAPPC13-208ENST00000505553 RAD21O60216 631 aa6.87□□□□□ -1.31
TRAPPC13-208ENST00000505553 MAP2K3P46734 347 aa6.87□□□□□ -1.31
TRAPPC13-208ENST00000505553 SNRPNP63162 240 aaKnown RBP6.87□□□□□ -1.31
TRAPPC13-208ENST00000505553 PDXDC2PQ6P474 469 aa6.87□□□□□ -1.31
TRAPPC13-208ENST00000505553 PRICKLE2Q7Z3G6 844 aa6.87□□□□□ -1.31
TRAPPC13-208ENST00000505553 ZBTB33Q86T24 672 aa6.87□□□□□ -1.31
TRAPPC13-208ENST00000505553 CCDC82Q8N4S0 544 aa6.87□□□□□ -1.31
TRAPPC13-208ENST00000505553 TRIM52Q96A61 297 aa6.87□□□□□ -1.31
TRAPPC13-208ENST00000505553 POLR3EQ9NVU0 708 aa6.87□□□□□ -1.31
TRAPPC13-208ENST00000505553 DBN1Q16643 649 aa6.86□□□□□ -1.31
TRAPPC13-208ENST00000505553 RTL5Q5HYW3 569 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC13-208ENST00000505553 ZMYM1Q5SVZ6 1142 aa6.86□□□□□ -1.31
TRAPPC13-208ENST00000505553 GTPBP3Q969Y2 492 aaKnown RBP6.86□□□□□ -1.31
TRAPPC13-208ENST00000505553 OXCT2Q9BYC2 517 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC13-208ENST00000505553 ATP1B4Q9UN42 357 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC13-208ENST00000505553 RHOQP17081 205 aa6.85□□□□□ -1.31
TRAPPC13-208ENST00000505553 PROSER2Q86WR7 435 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC13-208ENST00000505553 RRAGCQ9HB90 399 aa6.85□□□□□ -1.31
TRAPPC13-208ENST00000505553 COL8A1P27658 744 aa6.84□□□□□ -1.31
TRAPPC13-208ENST00000505553 RNF144AP50876 292 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-208ENST00000505553 GRIN2CQ14957 1233 aa6.84□□□□□ -1.31
TRAPPC13-208ENST00000505553 NBPF20Q3BBV1 942 aa6.84□□□□□ -1.31
TRAPPC13-208ENST00000505553 DYRK1BQ9Y463 629 aa6.84□□□□□ -1.31
TRAPPC13-208ENST00000505553 NPM2Q86SE8 214 aaKnown RBP6.84□□□□□ -1.32
TRAPPC13-208ENST00000505553 KRTAP4-12Q9BQ66 201 aa6.84□□□□□ -1.32
TRAPPC13-208ENST00000505553 SERPINA10Q9UK55 444 aa6.84□□□□□ -1.32
TRAPPC13-208ENST00000505553 ZNF784Q8NCA9 323 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC13-208ENST00000505553 CCDC97Q96F63 343 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC13-208ENST00000505553 SEMA6BQ9H3T3 888 aa6.83□□□□□ -1.32
TRAPPC13-208ENST00000505553 CCDC9Q9Y3X0 531 aaKnown RBP6.83□□□□□ -1.32
TRAPPC13-208ENST00000505553 C1QTNF9BB2RNN3 333 aa6.82□□□□□ -1.32
TRAPPC13-208ENST00000505553 GPC1P35052 558 aa6.82□□□□□ -1.32
TRAPPC13-208ENST00000505553 GAS2L1Q99501 681 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC13-208ENST00000505553 TMPRSS4Q9NRS4 437 aa6.82□□□□□ -1.32
TRAPPC13-208ENST00000505553 GDF2Q9UK05 429 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC13-208ENST00000505553 ZNF777Q9ULD5 760 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC13-208ENST00000505553 ZC3H4Q9UPT8 1303 aaKnown RBP6.81□□□□□ -1.32
TRAPPC13-208ENST00000505553 SCO2A0A1W2PP80 73 aa6.81□□□□□ -1.32
TRAPPC13-208ENST00000505553 SHISA8B8ZZ34 492 aa6.8□□□□□ -1.32
TRAPPC13-208ENST00000505553 ADD1P35611 737 aaKnown RBP6.8□□□□□ -1.32
TRAPPC13-208ENST00000505553 PTK2Q05397 1052 aa6.8□□□□□ -1.32
TRAPPC13-208ENST00000505553 CTDSPL2Q05D32 466 aa6.8□□□□□ -1.32
TRAPPC13-208ENST00000505553 FNBP4Q8N3X1 1017 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-208ENST00000505553 BANK1Q8NDB2 785 aa6.8□□□□□ -1.32
TRAPPC13-208ENST00000505553 EDARADDQ8WWZ3 215 aa6.8□□□□□ -1.32
TRAPPC13-208ENST00000505553 FKBPLQ9UIM3 349 aa6.8□□□□□ -1.32
TRAPPC13-208ENST00000505553 LILRA1O75019 489 aa6.79□□□□□ -1.32
TRAPPC13-208ENST00000505553 CD163Q86VB7 1156 aa6.79□□□□□ -1.32
TRAPPC13-208ENST00000505553 KDF1Q8NAX2 398 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC13-208ENST00000505553 PROCA1Q8NCQ7 364 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms