RNA–Protein interactions for RNA: ENST00000505278.1

PLXNA1-204, Transcript of plexin A1, humanhuman

TSL 4

Gene PLXNA1, Length 536 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-204ENST00000505278 CFAP53Q96M91 514 aa23.3■■□□□ 1.32
PLXNA1-204ENST00000505278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.3■■□□□ 1.32
PLXNA1-204ENST00000505278 DDX54Q8TDD1 881 aaKnown RBP23.29■■□□□ 1.32
PLXNA1-204ENST00000505278 BCL11BQ9C0K0 894 aaPredicted RBP23.29■■□□□ 1.32
PLXNA1-204ENST00000505278 SPG7Q9UQ90 795 aa23.29■■□□□ 1.32
PLXNA1-204ENST00000505278 PARD3Q8TEW0 1356 aa23.28■■□□□ 1.32
PLXNA1-204ENST00000505278 TNS1Q9HBL0 1735 aaKnown RBP23.28■■□□□ 1.32
PLXNA1-204ENST00000505278 DIAPH1O60610 1272 aaKnown RBP23.28■■□□□ 1.32
PLXNA1-204ENST00000505278 APBA3O96018 575 aa23.27■■□□□ 1.32
PLXNA1-204ENST00000505278 PPP2R1AP30153 589 aa23.27■■□□□ 1.32
PLXNA1-204ENST00000505278 DEFB132Q7Z7B7 95 aa23.26■■□□□ 1.31
PLXNA1-204ENST00000505278 KDRP35968 1356 aa23.26■■□□□ 1.31
PLXNA1-204ENST00000505278 ZNF316A6NFI3 1004 aaPredicted RBP23.25■■□□□ 1.31
PLXNA1-204ENST00000505278 PKD1L3Q7Z443 1732 aa23.25■■□□□ 1.31
PLXNA1-204ENST00000505278 COL3A1P02461 1466 aaPredicted RBP23.24■■□□□ 1.31
PLXNA1-204ENST00000505278 RALBP1Q15311 655 aa23.24■■□□□ 1.31
PLXNA1-204ENST00000505278 NHSQ6T4R5 1651 aa23.22■■□□□ 1.31
PLXNA1-204ENST00000505278 SHANK3Q9BYB0 1731 aa23.22■■□□□ 1.31
PLXNA1-204ENST00000505278 AMOTQ4VCS5 1084 aa23.22■■□□□ 1.31
PLXNA1-204ENST00000505278 SULT6B1Q6IMI4 303 aa23.22■■□□□ 1.31
PLXNA1-204ENST00000505278 SBF2Q86WG5 1849 aa23.22■■□□□ 1.31
PLXNA1-204ENST00000505278 EN1Q05925 392 aaPredicted RBP23.21■■□□□ 1.31
PLXNA1-204ENST00000505278 PLEKHO1Q53GL0 409 aaPredicted RBP23.21■■□□□ 1.31
PLXNA1-204ENST00000505278 PLSCR1O15162 318 aa23.2■■□□□ 1.3
PLXNA1-204ENST00000505278 NUDCQ9Y266 331 aa23.2■■□□□ 1.3
PLXNA1-204ENST00000505278 CYP27B1O15528 508 aa23.19■■□□□ 1.3
PLXNA1-204ENST00000505278 AEBP1Q8IUX7 1158 aa23.19■■□□□ 1.3
PLXNA1-204ENST00000505278 ACSBG1Q96GR2 724 aa23.19■■□□□ 1.3
PLXNA1-204ENST00000505278 CAMKK2Q96RR4 588 aa23.19■■□□□ 1.3
PLXNA1-204ENST00000505278 IFNL2Q8IZJ0 200 aa23.18■■□□□ 1.3
PLXNA1-204ENST00000505278 RGPD3A6NKT7 1758 aaPredicted RBP23.18■■□□□ 1.3
PLXNA1-204ENST00000505278 RGPD4Q7Z3J3 1758 aa23.18■■□□□ 1.3
PLXNA1-204ENST00000505278 NKX1-1Q15270 411 aaPredicted RBP23.17■■□□□ 1.3
PLXNA1-204ENST00000505278 U2SURPO15042 1029 aaKnown RBP23.16■■□□□ 1.3
PLXNA1-204ENST00000505278 KCNQ2O43526 872 aa23.16■■□□□ 1.3
PLXNA1-204ENST00000505278 HSP90AB1P08238 724 aaKnown RBP23.16■■□□□ 1.3
PLXNA1-204ENST00000505278 EZH2Q15910 746 aaKnown RBP23.16■■□□□ 1.3
PLXNA1-204ENST00000505278 PHKG2P15735 406 aa23.15■■□□□ 1.3
PLXNA1-204ENST00000505278 SYTL4Q96C24 671 aaPredicted RBP23.14■■□□□ 1.29
PLXNA1-204ENST00000505278 DOT1LQ8TEK3 1739 aa23.13■■□□□ 1.29
PLXNA1-204ENST00000505278 MYBBP1AQ9BQG0 1328 aaKnown RBP23.13■■□□□ 1.29
PLXNA1-204ENST00000505278 HMOX1P09601 288 aa23.13■■□□□ 1.29
PLXNA1-204ENST00000505278 PRIM1P49642 420 aaKnown RBP23.13■■□□□ 1.29
PLXNA1-204ENST00000505278 C1orf141Q5JVX7 400 aa23.13■■□□□ 1.29
PLXNA1-204ENST00000505278 ZNF530Q6P9A1 599 aaPredicted RBP23.13■■□□□ 1.29
PLXNA1-204ENST00000505278 PTF1AQ7RTS3 328 aa23.13■■□□□ 1.29
PLXNA1-204ENST00000505278 RREB1Q92766 1687 aa23.1■■□□□ 1.29
PLXNA1-204ENST00000505278 DCAF5Q96JK2 942 aa23.09■■□□□ 1.29
PLXNA1-204ENST00000505278 BTAF1O14981 1849 aa23.08■■□□□ 1.29
PLXNA1-204ENST00000505278 U2AF1L5P0DN76 240 aaPredicted RBP23.08■■□□□ 1.29
PLXNA1-204ENST00000505278 U2AF1Q01081 240 aaKnown RBP eCLIP23.08■■□□□ 1.29
PLXNA1-204ENST00000505278 PRKRIP1Q9H875 184 aaPredicted RBP23.08■■□□□ 1.29
PLXNA1-204ENST00000505278 TXNRD1Q16881 649 aa23.07■■□□□ 1.28
PLXNA1-204ENST00000505278 AKAP4Q5JQC9 854 aa23.07■■□□□ 1.28
PLXNA1-204ENST00000505278 NBPF14Q5TI25 921 aa23.07■■□□□ 1.28
PLXNA1-204ENST00000505278 ERVV-2B6SEH9 535 aa23.06■■□□□ 1.28
PLXNA1-204ENST00000505278 FCHSD2O94868 740 aa23.05■■□□□ 1.28
PLXNA1-204ENST00000505278 HMGB2P26583 209 aaKnown RBP23.05■■□□□ 1.28
PLXNA1-204ENST00000505278 SLC27A3Q5K4L6 730 aa23.05■■□□□ 1.28
PLXNA1-204ENST00000505278 GAS2L2Q8NHY3 880 aa23.05■■□□□ 1.28
PLXNA1-204ENST00000505278 RSPH6AQ9H0K4 717 aa23.05■■□□□ 1.28
PLXNA1-204ENST00000505278 TMOD3Q9NYL9 352 aa23.05■■□□□ 1.28
PLXNA1-204ENST00000505278 MPRIPQ6WCQ1 1025 aa23.04■■□□□ 1.28
PLXNA1-204ENST00000505278 SMARCC1Q92922 1105 aaPredicted RBP23.04■■□□□ 1.28
PLXNA1-204ENST00000505278 NUP188Q5SRE5 1749 aa23.04■■□□□ 1.28
PLXNA1-204ENST00000505278 TOGARAM1Q9Y4F4 1720 aa23.04■■□□□ 1.28
PLXNA1-204ENST00000505278 PRKAR2BP31323 418 aa23.03■■□□□ 1.28
PLXNA1-204ENST00000505278 PROM2Q8N271 834 aa23.02■■□□□ 1.28
PLXNA1-204ENST00000505278 PNNQ9H307 717 aaKnown RBP23.02■■□□□ 1.28
PLXNA1-204ENST00000505278 KAT6BQ8WYB5 2073 aa23.02■■□□□ 1.28
PLXNA1-204ENST00000505278 KDM6AO15550 1401 aaPredicted RBP23.01■■□□□ 1.27
PLXNA1-204ENST00000505278 NEFMP07197 916 aa23.01■■□□□ 1.27
PLXNA1-204ENST00000505278 MTHFSDQ2M296 383 aaKnown RBP23.01■■□□□ 1.27
PLXNA1-204ENST00000505278 PIGBQ92521 554 aa23■■□□□ 1.27
PLXNA1-204ENST00000505278 CABP4P57796 275 aa22.99■■□□□ 1.27
PLXNA1-204ENST00000505278 PALLDQ8WX93 1383 aa22.99■■□□□ 1.27
PLXNA1-204ENST00000505278 MAP3K5Q99683 1374 aa22.98■■□□□ 1.27
PLXNA1-204ENST00000505278 STK32BQ9NY57 414 aa22.97■■□□□ 1.27
PLXNA1-204ENST00000505278 ITGB4P16144 1822 aa22.96■■□□□ 1.27
PLXNA1-204ENST00000505278 GNAT3A8MTJ3 354 aa22.96■■□□□ 1.27
PLXNA1-204ENST00000505278 ANP32CO43423 234 aa22.96■■□□□ 1.27
PLXNA1-204ENST00000505278 R3HDM1Q15032 1099 aaKnown RBP22.96■■□□□ 1.27
PLXNA1-204ENST00000505278 CCNL1Q9UK58 526 aaPredicted RBP22.96■■□□□ 1.27
PLXNA1-204ENST00000505278 LY75O60449 1722 aa22.95■■□□□ 1.26
PLXNA1-204ENST00000505278 MRC1P22897 1456 aa22.94■■□□□ 1.26
PLXNA1-204ENST00000505278 RNMTO43148 476 aaKnown RBP22.94■■□□□ 1.26
PLXNA1-204ENST00000505278 PHACTR3Q96KR7 559 aa22.94■■□□□ 1.26
PLXNA1-204ENST00000505278 PSDA5PKW4 1024 aaPredicted RBP22.93■■□□□ 1.26
PLXNA1-204ENST00000505278 WDR43Q15061 677 aaKnown RBP eCLIP22.93■■□□□ 1.26
PLXNA1-204ENST00000505278 LRRC4BQ9NT99 713 aa22.93■■□□□ 1.26
PLXNA1-204ENST00000505278 PAPPAQ13219 1627 aa22.93■■□□□ 1.26
PLXNA1-204ENST00000505278 MAPK8IP3Q9UPT6 1336 aa22.92■■□□□ 1.26
PLXNA1-204ENST00000505278 SLC15A2Q16348 729 aa22.92■■□□□ 1.26
PLXNA1-204ENST00000505278 SLC52A2Q9HAB3 445 aa22.92■■□□□ 1.26
PLXNA1-204ENST00000505278 ANO8Q9HCE9 1232 aaPredicted RBP22.92■■□□□ 1.26
PLXNA1-204ENST00000505278 ADAMTS7Q9UKP4 1686 aa22.92■■□□□ 1.26
PLXNA1-204ENST00000505278 SCN11AQ9UI33 1791 aa22.91■■□□□ 1.26
PLXNA1-204ENST00000505278 NFATC2IPQ8NCF5 419 aa22.91■■□□□ 1.26
PLXNA1-204ENST00000505278 ATG3Q9NT62 314 aa22.91■■□□□ 1.26
PLXNA1-204ENST00000505278 ASAP1Q9ULH1 1129 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms