RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CACNA1FO60840 1977 aa11.21□□□□□ -0.62
CDC42SE2-208ENST00000505065 TCP11L2Q8N4U5 519 aa11.21□□□□□ -0.62
CDC42SE2-208ENST00000505065 DIAPH1O60610 1272 aaKnown RBP11.2□□□□□ -0.62
CDC42SE2-208ENST00000505065 RBM6P78332 1123 aaKnown RBP11.2□□□□□ -0.62
CDC42SE2-208ENST00000505065 C8orf37Q96NL8 207 aa11.2□□□□□ -0.62
CDC42SE2-208ENST00000505065 FCHSD2O94868 740 aa11.2□□□□□ -0.62
CDC42SE2-208ENST00000505065 UBR3Q6ZT12 1888 aa11.2□□□□□ -0.62
CDC42SE2-208ENST00000505065 POLR3GLQ9BT43 218 aa11.19□□□□□ -0.62
CDC42SE2-208ENST00000505065 ADAMTS2O95450 1211 aa11.19□□□□□ -0.62
CDC42SE2-208ENST00000505065 AMPHP49418 695 aa11.19□□□□□ -0.62
CDC42SE2-208ENST00000505065 ZNF521Q96K83 1311 aa11.18□□□□□ -0.62
CDC42SE2-208ENST00000505065 C4AP0C0L4 1744 aa11.18□□□□□ -0.62
CDC42SE2-208ENST00000505065 C4BP0C0L5 1744 aa11.18□□□□□ -0.62
CDC42SE2-208ENST00000505065 EP400Q96L91 3159 aa11.18□□□□□ -0.62
CDC42SE2-208ENST00000505065 NUTM2BA6NNL0 878 aaPredicted RBP11.18□□□□□ -0.62
CDC42SE2-208ENST00000505065 NUTM2EB1AL46 878 aaPredicted RBP11.18□□□□□ -0.62
CDC42SE2-208ENST00000505065 NUTM2AQ8IVF1 878 aaPredicted RBP11.18□□□□□ -0.62
CDC42SE2-208ENST00000505065 DIEXFQ68CQ4 756 aaKnown RBP11.17□□□□□ -0.62
CDC42SE2-208ENST00000505065 NGLY1Q96IV0 654 aa11.17□□□□□ -0.62
CDC42SE2-208ENST00000505065 ANP32CO43423 234 aa11.16□□□□□ -0.62
CDC42SE2-208ENST00000505065 CCDC27Q2M243 656 aa11.16□□□□□ -0.62
CDC42SE2-208ENST00000505065 QTRT2Q9H974 415 aaKnown RBP11.16□□□□□ -0.62
CDC42SE2-208ENST00000505065 LMOD2Q6P5Q4 547 aa11.16□□□□□ -0.62
CDC42SE2-208ENST00000505065 HEG1Q9ULI3 1381 aa11.16□□□□□ -0.62
CDC42SE2-208ENST00000505065 IL2RBP14784 551 aa11.16□□□□□ -0.62
CDC42SE2-208ENST00000505065 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.62
CDC42SE2-208ENST00000505065 CFAP53Q96M91 514 aa11.15□□□□□ -0.62
CDC42SE2-208ENST00000505065 SCN7AQ01118 1682 aa11.15□□□□□ -0.62
CDC42SE2-208ENST00000505065 AEBP1Q8IUX7 1158 aa11.15□□□□□ -0.62
CDC42SE2-208ENST00000505065 PCDH11XQ9BZA7 1347 aa11.14□□□□□ -0.63
CDC42SE2-208ENST00000505065 PCDH11YQ9BZA8 1340 aa11.14□□□□□ -0.63
CDC42SE2-208ENST00000505065 AMOTQ4VCS5 1084 aa11.14□□□□□ -0.63
CDC42SE2-208ENST00000505065 ANKRD36CQ5JPF3 1778 aa11.13□□□□□ -0.63
CDC42SE2-208ENST00000505065 MAP3K5Q99683 1374 aa11.13□□□□□ -0.63
CDC42SE2-208ENST00000505065 CYP27B1O15528 508 aa11.13□□□□□ -0.63
CDC42SE2-208ENST00000505065 MEX3CQ5U5Q3 659 aaKnown RBP11.13□□□□□ -0.63
CDC42SE2-208ENST00000505065 PHKG2P15735 406 aa11.12□□□□□ -0.63
CDC42SE2-208ENST00000505065 MIER1Q8N108 512 aa11.12□□□□□ -0.63
CDC42SE2-208ENST00000505065 NGEFQ8N5V2 710 aa11.12□□□□□ -0.63
CDC42SE2-208ENST00000505065 MARCH10Q8NA82 808 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE2-208ENST00000505065 ADAMTS8Q9UP79 889 aa11.12□□□□□ -0.63
CDC42SE2-208ENST00000505065 TNNT2P45379 298 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE2-208ENST00000505065 NRXN2Q9P2S2 1712 aa11.11□□□□□ -0.63
CDC42SE2-208ENST00000505065 MYH14Q7Z406 1995 aaKnown RBP11.11□□□□□ -0.63
CDC42SE2-208ENST00000505065 RXRBP28702 533 aa11.11□□□□□ -0.63
CDC42SE2-208ENST00000505065 PHACTR3Q96KR7 559 aa11.11□□□□□ -0.63
CDC42SE2-208ENST00000505065 TOM1L2Q6ZVM7 507 aa11.11□□□□□ -0.63
CDC42SE2-208ENST00000505065 SULT6B1Q6IMI4 303 aa11.1□□□□□ -0.63
CDC42SE2-208ENST00000505065 AKAP4Q5JQC9 854 aa11.1□□□□□ -0.63
CDC42SE2-208ENST00000505065 RUNDC1Q96C34 613 aa11.1□□□□□ -0.63
CDC42SE2-208ENST00000505065 TRIM35Q9UPQ4 493 aa11.1□□□□□ -0.63
CDC42SE2-208ENST00000505065 KIF13BQ9NQT8 1826 aa11.1□□□□□ -0.63
CDC42SE2-208ENST00000505065 MTHFSDQ2M296 383 aaKnown RBP11.1□□□□□ -0.63
CDC42SE2-208ENST00000505065 SEPT12Q8IYM1 358 aa11.09□□□□□ -0.63
CDC42SE2-208ENST00000505065 BABAM1Q9NWV8 329 aa11.09□□□□□ -0.63
CDC42SE2-208ENST00000505065 NUDCQ9Y266 331 aa11.09□□□□□ -0.63
CDC42SE2-208ENST00000505065 HAP1P54257 671 aaPredicted RBP11.09□□□□□ -0.63
CDC42SE2-208ENST00000505065 LAMB2P55268 1798 aa11.09□□□□□ -0.63
CDC42SE2-208ENST00000505065 ZNF853P0CG23 659 aa11.09□□□□□ -0.63
CDC42SE2-208ENST00000505065 TRMT2AQ8IZ69 625 aaKnown RBP11.09□□□□□ -0.63
CDC42SE2-208ENST00000505065 PNNQ9H307 717 aaKnown RBP11.09□□□□□ -0.63
CDC42SE2-208ENST00000505065 EVA1CP58658 441 aa11.08□□□□□ -0.64
CDC42SE2-208ENST00000505065 NFE2L2Q16236 605 aa11.08□□□□□ -0.64
CDC42SE2-208ENST00000505065 USHBP1Q8N6Y0 703 aa11.08□□□□□ -0.64
CDC42SE2-208ENST00000505065 ZCRB1Q8TBF4 217 aaKnown RBP11.08□□□□□ -0.64
CDC42SE2-208ENST00000505065 STRN4Q9NRL3 753 aa11.08□□□□□ -0.64
CDC42SE2-208ENST00000505065 SOX12O15370 315 aa11.08□□□□□ -0.64
CDC42SE2-208ENST00000505065 TATP17735 454 aaPredicted RBP11.08□□□□□ -0.64
CDC42SE2-208ENST00000505065 IL16Q14005 1332 aa11.08□□□□□ -0.64
CDC42SE2-208ENST00000505065 ERVV-2B6SEH9 535 aa11.07□□□□□ -0.64
CDC42SE2-208ENST00000505065 ARFGEF2Q9Y6D5 1785 aa11.07□□□□□ -0.64
CDC42SE2-208ENST00000505065 FAM98CQ17RN3 349 aaKnown RBP11.07□□□□□ -0.64
CDC42SE2-208ENST00000505065 SPG7Q9UQ90 795 aa11.07□□□□□ -0.64
CDC42SE2-208ENST00000505065 KIAA1551Q9HCM1 1747 aa11.07□□□□□ -0.64
CDC42SE2-208ENST00000505065 PRKAR2BP31323 418 aa11.07□□□□□ -0.64
CDC42SE2-208ENST00000505065 NLRP2Q9NX02 1062 aa11.07□□□□□ -0.64
CDC42SE2-208ENST00000505065 PLEKHO1Q53GL0 409 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE2-208ENST00000505065 GAS2L2Q8NHY3 880 aa11.06□□□□□ -0.64
CDC42SE2-208ENST00000505065 TMPOP42166 694 aaKnown RBP11.06□□□□□ -0.64
CDC42SE2-208ENST00000505065 DCAF5Q96JK2 942 aa11.06□□□□□ -0.64
CDC42SE2-208ENST00000505065 IFNL2Q8IZJ0 200 aa11.05□□□□□ -0.64
CDC42SE2-208ENST00000505065 DDB1Q16531 1140 aa11.05□□□□□ -0.64
CDC42SE2-208ENST00000505065 IL17REQ8NFR9 667 aa11.05□□□□□ -0.64
CDC42SE2-208ENST00000505065 KRT27Q7Z3Y8 459 aa11.05□□□□□ -0.64
CDC42SE2-208ENST00000505065 DLEC1Q9Y238 1755 aa11.04□□□□□ -0.64
CDC42SE2-208ENST00000505065 RNMTO43148 476 aaKnown RBP11.04□□□□□ -0.64
CDC42SE2-208ENST00000505065 LRP5O75197 1615 aa11.04□□□□□ -0.64
CDC42SE2-208ENST00000505065 HSP90AB1P08238 724 aaKnown RBP11.04□□□□□ -0.64
CDC42SE2-208ENST00000505065 RAPGEF4Q8WZA2 1011 aa11.04□□□□□ -0.64
CDC42SE2-208ENST00000505065 MRS2Q9HD23 443 aa11.04□□□□□ -0.64
CDC42SE2-208ENST00000505065 HMOX1P09601 288 aa11.03□□□□□ -0.64
CDC42SE2-208ENST00000505065 EXOC5O00471 708 aa11.03□□□□□ -0.64
CDC42SE2-208ENST00000505065 BCL11BQ9C0K0 894 aaPredicted RBP11.03□□□□□ -0.64
CDC42SE2-208ENST00000505065 IBTKQ9P2D0 1353 aaPredicted RBP11.03□□□□□ -0.64
CDC42SE2-208ENST00000505065 U2AF1L5P0DN76 240 aaPredicted RBP11.03□□□□□ -0.64
CDC42SE2-208ENST00000505065 U2AF1Q01081 240 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDC42SE2-208ENST00000505065 NUP98P52948 1817 aa11.03□□□□□ -0.64
CDC42SE2-208ENST00000505065 GNAT3A8MTJ3 354 aa11.02□□□□□ -0.64
CDC42SE2-208ENST00000505065 PPM1GO15355 546 aaPredicted RBP11.02□□□□□ -0.64
CDC42SE2-208ENST00000505065 LTV1Q96GA3 475 aaPredicted RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms