RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 CEP83Q9Y592 693 aa7.12□□□□□ -1.27
LINC02397-201ENST00000504409 TMED1Q13445 227 aa7.12□□□□□ -1.27
LINC02397-201ENST00000504409 WDR63Q8IWG1 891 aa7.12□□□□□ -1.27
LINC02397-201ENST00000504409 CCDC114Q96M63 670 aa7.12□□□□□ -1.27
LINC02397-201ENST00000504409 SFPQP23246 707 aaKnown RBP eCLIP7.11□□□□□ -1.27
LINC02397-201ENST00000504409 ANAPC15P60006 121 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 SMC1AQ14683 1233 aaKnown RBP7.11□□□□□ -1.27
LINC02397-201ENST00000504409 C6orf163Q5TEZ5 329 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 P3H4Q92791 437 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 SPATS2LQ9NUQ6 558 aaKnown RBP7.11□□□□□ -1.27
LINC02397-201ENST00000504409 NESP48681 1621 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 LRPPRCP42704 1394 aaKnown RBP7.11□□□□□ -1.27
LINC02397-201ENST00000504409 EBAG9O00559 213 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 CDK5RAP3Q96JB5 506 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 IQSEC3Q9UPP2 1182 aaPredicted RBP7.11□□□□□ -1.27
LINC02397-201ENST00000504409 VCXQ9H320 206 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 DZIP1LQ8IYY4 767 aaKnown RBP7.11□□□□□ -1.27
LINC02397-201ENST00000504409 IFT74Q96LB3 600 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.11□□□□□ -1.27
LINC02397-201ENST00000504409 SMC3Q9UQE7 1217 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 UHRF1BP1Q6BDS2 1440 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 WDR97A6NE52 1622 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 LRCH2Q5VUJ6 765 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 LRSAM1Q6UWE0 723 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 EFCAB13Q8IY85 973 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 MED4Q9NPJ6 270 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 ZNF777Q9ULD5 760 aaPredicted RBP7.11□□□□□ -1.27
LINC02397-201ENST00000504409 KRT32Q14532 448 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 SLFNL1Q499Z3 407 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.11□□□□□ -1.27
LINC02397-201ENST00000504409 TNNT1P13805 278 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 SF3A1Q15459 793 aaKnown RBP7.11□□□□□ -1.27
LINC02397-201ENST00000504409 RUBCNQ92622 972 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 THEGQ9P2T0 379 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 PTPN23Q9H3S7 1636 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 BAG4O95429 457 aaKnown RBP7.11□□□□□ -1.27
LINC02397-201ENST00000504409 MAP2K2P36507 400 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 ERO1AQ96HE7 468 aa7.11□□□□□ -1.27
LINC02397-201ENST00000504409 SKILP12757 684 aa7.1□□□□□ -1.27
LINC02397-201ENST00000504409 ISM2Q6H9L7 571 aa7.1□□□□□ -1.27
LINC02397-201ENST00000504409 RIPPLY1Q0D2K3 151 aa7.1□□□□□ -1.27
LINC02397-201ENST00000504409 HDAC1Q13547 482 aaPredicted RBP7.1□□□□□ -1.27
LINC02397-201ENST00000504409 GOLGA5Q8TBA6 731 aa7.1□□□□□ -1.27
LINC02397-201ENST00000504409 NBPF3Q9H094 633 aa7.1□□□□□ -1.27
LINC02397-201ENST00000504409 KIF5CO60282 957 aa7.1□□□□□ -1.27
LINC02397-201ENST00000504409 MEX3CQ5U5Q3 659 aaKnown RBP7.1□□□□□ -1.27
LINC02397-201ENST00000504409 RPGRIP1LQ68CZ1 1315 aa7.1□□□□□ -1.27
LINC02397-201ENST00000504409 CECR2Q9BXF3 1484 aa7.1□□□□□ -1.27
LINC02397-201ENST00000504409 PPP1R12BO60237 982 aaPredicted RBP7.1□□□□□ -1.27
LINC02397-201ENST00000504409 MROH2BQ7Z745 1585 aa7.1□□□□□ -1.27
LINC02397-201ENST00000504409 FRAT2O75474 233 aaPredicted RBP7.1□□□□□ -1.27
LINC02397-201ENST00000504409 TAX1BP1Q86VP1 789 aa7.1□□□□□ -1.27
LINC02397-201ENST00000504409 XBP1P17861 261 aa7.1□□□□□ -1.27
LINC02397-201ENST00000504409 MAP3K11Q16584 847 aa7.1□□□□□ -1.27
LINC02397-201ENST00000504409 NBPF11Q86T75 865 aa7.1□□□□□ -1.27
LINC02397-201ENST00000504409 RTF1Q92541 710 aaKnown RBP7.1□□□□□ -1.27
LINC02397-201ENST00000504409 IMPACTQ9P2X3 320 aa7.09□□□□□ -1.27
LINC02397-201ENST00000504409 IRX1P78414 480 aaPredicted RBP7.09□□□□□ -1.27
LINC02397-201ENST00000504409 CFDP1Q9UEE9 299 aaPredicted RBP7.09□□□□□ -1.27
LINC02397-201ENST00000504409 KIF5BP33176 963 aa7.09□□□□□ -1.27
LINC02397-201ENST00000504409 APBA1Q02410 837 aa7.09□□□□□ -1.27
LINC02397-201ENST00000504409 RPAP2Q8IXW5 612 aaPredicted RBP7.09□□□□□ -1.27
LINC02397-201ENST00000504409 LARSQ9P2J5 1176 aaKnown RBP7.09□□□□□ -1.27
LINC02397-201ENST00000504409 FGD5Q6ZNL6 1462 aa7.09□□□□□ -1.27
LINC02397-201ENST00000504409 CCHCR1Q8TD31 782 aa7.09□□□□□ -1.27
LINC02397-201ENST00000504409 FAM114A2Q9NRY5 505 aa7.09□□□□□ -1.27
LINC02397-201ENST00000504409 MCTP1Q6DN14 999 aa7.09□□□□□ -1.27
LINC02397-201ENST00000504409 ANKRD27Q96NW4 1050 aa7.09□□□□□ -1.27
LINC02397-201ENST00000504409 KAT6BQ8WYB5 2073 aa7.09□□□□□ -1.27
LINC02397-201ENST00000504409 ZNF445P59923 1031 aa7.09□□□□□ -1.27
LINC02397-201ENST00000504409 IRX4P78413 519 aa7.09□□□□□ -1.27
LINC02397-201ENST00000504409 MPHOSPH9Q99550 1183 aa7.09□□□□□ -1.27
LINC02397-201ENST00000504409 HMGXB3Q12766 1538 aa7.09□□□□□ -1.27
LINC02397-201ENST00000504409 ANO10Q9NW15 660 aa7.09□□□□□ -1.27
LINC02397-201ENST00000504409 CDKL5O76039 1030 aa7.09□□□□□ -1.28
LINC02397-201ENST00000504409 ZFYP08048 801 aaPredicted RBP7.09□□□□□ -1.28
LINC02397-201ENST00000504409 CACNA2D4Q7Z3S7 1137 aa7.09□□□□□ -1.28
LINC02397-201ENST00000504409 TAOK3Q9H2K8 898 aa7.09□□□□□ -1.28
LINC02397-201ENST00000504409 ANKRD36BQ8N2N9 1353 aa7.09□□□□□ -1.28
LINC02397-201ENST00000504409 CCDC172P0C7W6 258 aa7.08□□□□□ -1.28
LINC02397-201ENST00000504409 ZNF853P0CG23 659 aa7.08□□□□□ -1.28
LINC02397-201ENST00000504409 TRIM29Q14134 588 aa7.08□□□□□ -1.28
LINC02397-201ENST00000504409 LZICQ8WZA0 190 aa7.08□□□□□ -1.28
LINC02397-201ENST00000504409 CWC25Q9NXE8 425 aaPredicted RBP7.08□□□□□ -1.28
LINC02397-201ENST00000504409 INTS4Q96HW7 963 aaKnown RBP7.08□□□□□ -1.28
LINC02397-201ENST00000504409 SEC62Q99442 399 aaKnown RBP7.08□□□□□ -1.28
LINC02397-201ENST00000504409 STIM1Q13586 685 aa7.08□□□□□ -1.28
LINC02397-201ENST00000504409 MORC1Q86VD1 984 aa7.08□□□□□ -1.28
LINC02397-201ENST00000504409 PIBF1Q8WXW3 757 aa7.08□□□□□ -1.28
LINC02397-201ENST00000504409 DNAJC8O75937 253 aaPredicted RBP7.08□□□□□ -1.28
LINC02397-201ENST00000504409 LMNTD2Q8IXW0 634 aa7.08□□□□□ -1.28
LINC02397-201ENST00000504409 CTAGE1Q96RT6 745 aa7.08□□□□□ -1.28
LINC02397-201ENST00000504409 SLU7O95391 586 aaKnown RBP7.08□□□□□ -1.28
LINC02397-201ENST00000504409 HDXQ7Z353 690 aa7.08□□□□□ -1.28
LINC02397-201ENST00000504409 NPM1P06748 294 aaKnown RBP eCLIP7.08□□□□□ -1.28
LINC02397-201ENST00000504409 UBE2HP62256 183 aa7.08□□□□□ -1.28
LINC02397-201ENST00000504409 LUC7L2Q9Y383 392 aaKnown RBP7.08□□□□□ -1.28
LINC02397-201ENST00000504409 NBPF9Q3BBW0 867 aa7.08□□□□□ -1.28
LINC02397-201ENST00000504409 ZNF592Q92610 1267 aa7.08□□□□□ -1.28
LINC02397-201ENST00000504409 RUNDC1Q96C34 613 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms