RNA–Protein interactions for RNA: ENST00000504160.1

RNF44-202, Transcript of ring finger protein 44, humanhuman

TSL 3

Gene RNF44, Length 887 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44-202ENST00000504160 CAMKK2Q96RR4 588 aa23.22■■□□□ 1.31
RNF44-202ENST00000504160 PTF1AQ7RTS3 328 aa23.21■■□□□ 1.31
RNF44-202ENST00000504160 NPC1L1Q9UHC9 1359 aa23.21■■□□□ 1.31
RNF44-202ENST00000504160 SBF2Q86WG5 1849 aa23.19■■□□□ 1.3
RNF44-202ENST00000504160 PCDH11XQ9BZA7 1347 aa23.19■■□□□ 1.3
RNF44-202ENST00000504160 PCDH11YQ9BZA8 1340 aa23.19■■□□□ 1.3
RNF44-202ENST00000504160 KCNQ2O43526 872 aa23.19■■□□□ 1.3
RNF44-202ENST00000504160 MTHFSP49914 203 aa23.19■■□□□ 1.3
RNF44-202ENST00000504160 SYTL4Q96C24 671 aaPredicted RBP23.18■■□□□ 1.3
RNF44-202ENST00000504160 PLSCR1O15162 318 aa23.17■■□□□ 1.3
RNF44-202ENST00000504160 SPG7Q9UQ90 795 aa23.17■■□□□ 1.3
RNF44-202ENST00000504160 NCAPD2Q15021 1401 aa23.16■■□□□ 1.3
RNF44-202ENST00000504160 IGSF1Q8N6C5 1336 aa23.15■■□□□ 1.3
RNF44-202ENST00000504160 NHSQ6T4R5 1651 aa23.13■■□□□ 1.29
RNF44-202ENST00000504160 PSDA5PKW4 1024 aaPredicted RBP23.13■■□□□ 1.29
RNF44-202ENST00000504160 NBPF14Q5TI25 921 aa23.13■■□□□ 1.29
RNF44-202ENST00000504160 KAT6BQ8WYB5 2073 aa23.12■■□□□ 1.29
RNF44-202ENST00000504160 PRIM1P49642 420 aaKnown RBP23.12■■□□□ 1.29
RNF44-202ENST00000504160 IL13P35225 146 aa23.11■■□□□ 1.29
RNF44-202ENST00000504160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.11■■□□□ 1.29
RNF44-202ENST00000504160 SHANK3Q9BYB0 1731 aa23.11■■□□□ 1.29
RNF44-202ENST00000504160 CYP27B1O15528 508 aa23.1■■□□□ 1.29
RNF44-202ENST00000504160 R3HDM1Q15032 1099 aaKnown RBP23.1■■□□□ 1.29
RNF44-202ENST00000504160 SULT6B1Q6IMI4 303 aa23.1■■□□□ 1.29
RNF44-202ENST00000504160 DIAPH1O60610 1272 aaKnown RBP23.09■■□□□ 1.29
RNF44-202ENST00000504160 TXNRD1Q16881 649 aa23.08■■□□□ 1.29
RNF44-202ENST00000504160 PLEKHO1Q53GL0 409 aaPredicted RBP23.08■■□□□ 1.29
RNF44-202ENST00000504160 AEBP1Q8IUX7 1158 aa23.08■■□□□ 1.29
RNF44-202ENST00000504160 RGPD3A6NKT7 1758 aaPredicted RBP23.07■■□□□ 1.28
RNF44-202ENST00000504160 RGPD4Q7Z3J3 1758 aa23.07■■□□□ 1.28
RNF44-202ENST00000504160 RREB1Q92766 1687 aa23.07■■□□□ 1.28
RNF44-202ENST00000504160 IFNL2Q8IZJ0 200 aa23.07■■□□□ 1.28
RNF44-202ENST00000504160 CFAP53Q96M91 514 aa23.07■■□□□ 1.28
RNF44-202ENST00000504160 PKD1L3Q7Z443 1732 aa23.07■■□□□ 1.28
RNF44-202ENST00000504160 DOT1LQ8TEK3 1739 aa23.07■■□□□ 1.28
RNF44-202ENST00000504160 NUP188Q5SRE5 1749 aa23.05■■□□□ 1.28
RNF44-202ENST00000504160 PLEKHG2Q9H7P9 1386 aa23.05■■□□□ 1.28
RNF44-202ENST00000504160 DDX10Q13206 875 aaKnown RBP23.05■■□□□ 1.28
RNF44-202ENST00000504160 AMOTQ4VCS5 1084 aa23.05■■□□□ 1.28
RNF44-202ENST00000504160 BTAF1O14981 1849 aa23.05■■□□□ 1.28
RNF44-202ENST00000504160 PHKG2P15735 406 aa23.04■■□□□ 1.28
RNF44-202ENST00000504160 PROM2Q8N271 834 aa23.04■■□□□ 1.28
RNF44-202ENST00000504160 U2SURPO15042 1029 aaKnown RBP23.03■■□□□ 1.28
RNF44-202ENST00000504160 HMOX1P09601 288 aa23.03■■□□□ 1.28
RNF44-202ENST00000504160 PPP2R1AP30153 589 aa23.03■■□□□ 1.28
RNF44-202ENST00000504160 MPRIPQ6WCQ1 1025 aa23.03■■□□□ 1.28
RNF44-202ENST00000504160 NKX1-1Q15270 411 aaPredicted RBP23.02■■□□□ 1.28
RNF44-202ENST00000504160 C1orf141Q5JVX7 400 aa23.02■■□□□ 1.28
RNF44-202ENST00000504160 ZNF530Q6P9A1 599 aaPredicted RBP23.02■■□□□ 1.28
RNF44-202ENST00000504160 KDRP35968 1356 aa23.01■■□□□ 1.27
RNF44-202ENST00000504160 HSP90AB1P08238 724 aaKnown RBP23■■□□□ 1.27
RNF44-202ENST00000504160 STK32BQ9NY57 414 aa23■■□□□ 1.27
RNF44-202ENST00000504160 SLC27A3Q5K4L6 730 aa22.99■■□□□ 1.27
RNF44-202ENST00000504160 ANO8Q9HCE9 1232 aaPredicted RBP22.98■■□□□ 1.27
RNF44-202ENST00000504160 TMOD3Q9NYL9 352 aa22.98■■□□□ 1.27
RNF44-202ENST00000504160 NUDCQ9Y266 331 aa22.98■■□□□ 1.27
RNF44-202ENST00000504160 COL3A1P02461 1466 aaPredicted RBP22.97■■□□□ 1.27
RNF44-202ENST00000504160 DCAF5Q96JK2 942 aa22.96■■□□□ 1.27
RNF44-202ENST00000504160 CCNL1Q9UK58 526 aaPredicted RBP22.95■■□□□ 1.26
RNF44-202ENST00000504160 SLC15A2Q16348 729 aa22.94■■□□□ 1.26
RNF44-202ENST00000504160 PIGBQ92521 554 aa22.94■■□□□ 1.26
RNF44-202ENST00000504160 SMARCC1Q92922 1105 aaPredicted RBP22.94■■□□□ 1.26
RNF44-202ENST00000504160 LRRC4BQ9NT99 713 aa22.94■■□□□ 1.26
RNF44-202ENST00000504160 SRCAPQ6ZRS2 3230 aa22.94■■□□□ 1.26
RNF44-202ENST00000504160 TOGARAM1Q9Y4F4 1720 aa22.94■■□□□ 1.26
RNF44-202ENST00000504160 PALLDQ8WX93 1383 aa22.93■■□□□ 1.26
RNF44-202ENST00000504160 KCNQ4P56696 695 aa22.93■■□□□ 1.26
RNF44-202ENST00000504160 ERVV-2B6SEH9 535 aa22.92■■□□□ 1.26
RNF44-202ENST00000504160 U2AF1L5P0DN76 240 aaPredicted RBP22.91■■□□□ 1.26
RNF44-202ENST00000504160 U2AF1Q01081 240 aaKnown RBP eCLIP22.91■■□□□ 1.26
RNF44-202ENST00000504160 RALBP1Q15311 655 aa22.91■■□□□ 1.26
RNF44-202ENST00000504160 AKAP4Q5JQC9 854 aa22.91■■□□□ 1.26
RNF44-202ENST00000504160 CABP4P57796 275 aa22.9■■□□□ 1.26
RNF44-202ENST00000504160 ITGB4P16144 1822 aa22.89■■□□□ 1.26
RNF44-202ENST00000504160 HMGB2P26583 209 aaKnown RBP22.88■■□□□ 1.25
RNF44-202ENST00000504160 MTHFSDQ2M296 383 aaKnown RBP22.88■■□□□ 1.25
RNF44-202ENST00000504160 KDM6AO15550 1401 aaPredicted RBP22.88■■□□□ 1.25
RNF44-202ENST00000504160 ZNF827Q17R98 1081 aa22.87■■□□□ 1.25
RNF44-202ENST00000504160 ASAP1Q9ULH1 1129 aa22.87■■□□□ 1.25
RNF44-202ENST00000504160 LY75O60449 1722 aa22.87■■□□□ 1.25
RNF44-202ENST00000504160 PRKAR2BP31323 418 aa22.86■■□□□ 1.25
RNF44-202ENST00000504160 GAS2L2Q8NHY3 880 aa22.86■■□□□ 1.25
RNF44-202ENST00000504160 TFCP2L1Q9NZI6 479 aa22.86■■□□□ 1.25
RNF44-202ENST00000504160 PAPPAQ13219 1627 aa22.85■■□□□ 1.25
RNF44-202ENST00000504160 AKT1S1Q96B36 256 aa22.84■■□□□ 1.25
RNF44-202ENST00000504160 RSPH6AQ9H0K4 717 aa22.84■■□□□ 1.25
RNF44-202ENST00000504160 SPON1Q9HCB6 807 aa22.84■■□□□ 1.25
RNF44-202ENST00000504160 ATG3Q9NT62 314 aa22.84■■□□□ 1.25
RNF44-202ENST00000504160 LOC102724428A0A0B4J2F2 783 aa22.83■■□□□ 1.25
RNF44-202ENST00000504160 SIK1P57059 783 aa22.83■■□□□ 1.25
RNF44-202ENST00000504160 NFATC2IPQ8NCF5 419 aa22.83■■□□□ 1.25
RNF44-202ENST00000504160 PDGFDQ9GZP0 370 aaPredicted RBP22.83■■□□□ 1.25
RNF44-202ENST00000504160 LRP5O75197 1615 aa22.82■■□□□ 1.24
RNF44-202ENST00000504160 ZNF316A6NFI3 1004 aaPredicted RBP22.82■■□□□ 1.24
RNF44-202ENST00000504160 FCHSD2O94868 740 aa22.82■■□□□ 1.24
RNF44-202ENST00000504160 ZBTB7AO95365 584 aa22.82■■□□□ 1.24
RNF44-202ENST00000504160 NEFMP07197 916 aa22.82■■□□□ 1.24
RNF44-202ENST00000504160 MYBBP1AQ9BQG0 1328 aaKnown RBP22.82■■□□□ 1.24
RNF44-202ENST00000504160 RBM42Q9BTD8 480 aaKnown RBP22.81■■□□□ 1.24
RNF44-202ENST00000504160 LGR6Q9HBX8 967 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms