RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 BABAM1Q9NWV8 329 aa10.54□□□□□ -0.72
TOPBP1-202ENST00000503338 COL16A1Q07092 1604 aaPredicted RBP10.54□□□□□ -0.72
TOPBP1-202ENST00000503338 MAP3K5Q99683 1374 aa10.53□□□□□ -0.72
TOPBP1-202ENST00000503338 EVA1CP58658 441 aa10.53□□□□□ -0.72
TOPBP1-202ENST00000503338 AKAP4Q5JQC9 854 aa10.53□□□□□ -0.72
TOPBP1-202ENST00000503338 USHBP1Q8N6Y0 703 aa10.53□□□□□ -0.72
TOPBP1-202ENST00000503338 LMO7Q8WWI1 1683 aa10.53□□□□□ -0.72
TOPBP1-202ENST00000503338 FANCIQ9NVI1 1328 aa10.53□□□□□ -0.72
TOPBP1-202ENST00000503338 JCADQ9P266 1359 aa10.52□□□□□ -0.72
TOPBP1-202ENST00000503338 FAM83GA6ND36 823 aa10.52□□□□□ -0.73
TOPBP1-202ENST00000503338 ZNF853P0CG23 659 aa10.52□□□□□ -0.73
TOPBP1-202ENST00000503338 C1orf141Q5JVX7 400 aa10.52□□□□□ -0.73
TOPBP1-202ENST00000503338 TOM1L2Q6ZVM7 507 aa10.52□□□□□ -0.73
TOPBP1-202ENST00000503338 CARD10Q9BWT7 1032 aa10.52□□□□□ -0.73
TOPBP1-202ENST00000503338 SPG7Q9UQ90 795 aa10.52□□□□□ -0.73
TOPBP1-202ENST00000503338 COL5A2P05997 1499 aaPredicted RBP10.52□□□□□ -0.73
TOPBP1-202ENST00000503338 RRP1P56182 461 aaKnown RBP10.51□□□□□ -0.73
TOPBP1-202ENST00000503338 COL14A1Q05707 1796 aaKnown RBP10.51□□□□□ -0.73
TOPBP1-202ENST00000503338 OVOS2A0A0G2JMS6 1433 aa10.5□□□□□ -0.73
TOPBP1-202ENST00000503338 CHL1O00533 1208 aa10.5□□□□□ -0.73
TOPBP1-202ENST00000503338 HSP90AB1P08238 724 aaKnown RBP10.5□□□□□ -0.73
TOPBP1-202ENST00000503338 ZNF530Q6P9A1 599 aaPredicted RBP10.5□□□□□ -0.73
TOPBP1-202ENST00000503338 CHMP4AQ9BY43 222 aa10.5□□□□□ -0.73
TOPBP1-202ENST00000503338 SPATA31A6Q5VVP1 1343 aa10.5□□□□□ -0.73
TOPBP1-202ENST00000503338 CRB1P82279 1406 aa10.5□□□□□ -0.73
TOPBP1-202ENST00000503338 RGPD5Q99666 1765 aa10.49□□□□□ -0.73
TOPBP1-202ENST00000503338 DLG5Q8TDM6 1919 aa10.49□□□□□ -0.73
TOPBP1-202ENST00000503338 FKBP8Q14318 412 aa10.49□□□□□ -0.73
TOPBP1-202ENST00000503338 PPP4R3CPQ6ZMV5 832 aa10.49□□□□□ -0.73
TOPBP1-202ENST00000503338 MCM10Q7L590 875 aa10.49□□□□□ -0.73
TOPBP1-202ENST00000503338 BTG4Q9NY30 223 aa10.49□□□□□ -0.73
TOPBP1-202ENST00000503338 LAS1LQ9Y4W2 734 aaKnown RBP10.49□□□□□ -0.73
TOPBP1-202ENST00000503338 SOS1Q07889 1333 aaPredicted RBP10.49□□□□□ -0.73
TOPBP1-202ENST00000503338 CEMIPQ8WUJ3 1361 aa10.49□□□□□ -0.73
TOPBP1-202ENST00000503338 IL2RBP14784 551 aa10.48□□□□□ -0.73
TOPBP1-202ENST00000503338 TAF7Q15545 349 aaPredicted RBP10.48□□□□□ -0.73
TOPBP1-202ENST00000503338 ALDH1L2Q3SY69 923 aa10.48□□□□□ -0.73
TOPBP1-202ENST00000503338 IFNL2Q8IZJ0 200 aa10.48□□□□□ -0.73
TOPBP1-202ENST00000503338 TSR2Q969E8 191 aaKnown RBP10.48□□□□□ -0.73
TOPBP1-202ENST00000503338 THUMPD2Q9BTF0 503 aaKnown RBP10.48□□□□□ -0.73
TOPBP1-202ENST00000503338 MBIPQ9NS73 344 aa10.48□□□□□ -0.73
TOPBP1-202ENST00000503338 MS4A1P11836 297 aa10.47□□□□□ -0.73
TOPBP1-202ENST00000503338 RARSP54136 660 aaKnown RBP10.47□□□□□ -0.73
TOPBP1-202ENST00000503338 EXOSC9Q06265 439 aaKnown RBP10.47□□□□□ -0.73
TOPBP1-202ENST00000503338 DCTN1Q14203 1278 aa10.47□□□□□ -0.73
TOPBP1-202ENST00000503338 CDCA7Q9BWT1 371 aaPredicted RBP10.47□□□□□ -0.73
TOPBP1-202ENST00000503338 STRN4Q9NRL3 753 aa10.47□□□□□ -0.73
TOPBP1-202ENST00000503338 THRAP3Q9Y2W1 955 aaKnown RBP10.47□□□□□ -0.73
TOPBP1-202ENST00000503338 RGPD2P0DJD1 1756 aa10.47□□□□□ -0.73
TOPBP1-202ENST00000503338 RNMTO43148 476 aaKnown RBP10.46□□□□□ -0.73
TOPBP1-202ENST00000503338 BRPF1P55201 1214 aaPredicted RBP10.46□□□□□ -0.73
TOPBP1-202ENST00000503338 TEFQ10587 303 aa10.46□□□□□ -0.73
TOPBP1-202ENST00000503338 LARP1Q6PKG0 1096 aaKnown RBP10.46□□□□□ -0.73
TOPBP1-202ENST00000503338 IL17REQ8NFR9 667 aa10.46□□□□□ -0.73
TOPBP1-202ENST00000503338 ZCRB1Q8TBF4 217 aaKnown RBP10.46□□□□□ -0.73
TOPBP1-202ENST00000503338 TSPYL4Q9UJ04 414 aa10.46□□□□□ -0.73
TOPBP1-202ENST00000503338 PCDH11XQ9BZA7 1347 aa10.46□□□□□ -0.73
TOPBP1-202ENST00000503338 PCDH11YQ9BZA8 1340 aa10.46□□□□□ -0.73
TOPBP1-202ENST00000503338 PARP4Q9UKK3 1724 aaKnown RBP10.45□□□□□ -0.74
TOPBP1-202ENST00000503338 LRRC37A3O60309 1634 aa10.45□□□□□ -0.74
TOPBP1-202ENST00000503338 MEGF6O75095 1541 aa10.45□□□□□ -0.74
TOPBP1-202ENST00000503338 KIF16BQ96L93 1317 aa10.45□□□□□ -0.74
TOPBP1-202ENST00000503338 IPO8O15397 1037 aaKnown RBP10.45□□□□□ -0.74
TOPBP1-202ENST00000503338 MSH5O43196 834 aa10.45□□□□□ -0.74
TOPBP1-202ENST00000503338 PHKG2P15735 406 aa10.45□□□□□ -0.74
TOPBP1-202ENST00000503338 DCAF5Q96JK2 942 aa10.45□□□□□ -0.74
TOPBP1-202ENST00000503338 NUTM2BA6NNL0 878 aaPredicted RBP10.44□□□□□ -0.74
TOPBP1-202ENST00000503338 NUTM2EB1AL46 878 aaPredicted RBP10.44□□□□□ -0.74
TOPBP1-202ENST00000503338 VAMP4O75379 141 aa10.44□□□□□ -0.74
TOPBP1-202ENST00000503338 ADAMTS2O95450 1211 aa10.44□□□□□ -0.74
TOPBP1-202ENST00000503338 CANXP27824 592 aaKnown RBP10.44□□□□□ -0.74
TOPBP1-202ENST00000503338 PDE3AQ14432 1141 aa10.44□□□□□ -0.74
TOPBP1-202ENST00000503338 TWISTNBQ3B726 338 aaPredicted RBP10.44□□□□□ -0.74
TOPBP1-202ENST00000503338 NUTM2AQ8IVF1 878 aaPredicted RBP10.44□□□□□ -0.74
TOPBP1-202ENST00000503338 SLIT2O94813 1529 aa10.43□□□□□ -0.74
TOPBP1-202ENST00000503338 HOXB7P09629 217 aa10.43□□□□□ -0.74
TOPBP1-202ENST00000503338 AAMPQ13685 434 aa10.43□□□□□ -0.74
TOPBP1-202ENST00000503338 SMC4Q9NTJ3 1288 aa10.43□□□□□ -0.74
TOPBP1-202ENST00000503338 PPP4R2Q9NY27 417 aa10.43□□□□□ -0.74
TOPBP1-202ENST00000503338 PKD1L3Q7Z443 1732 aa10.43□□□□□ -0.74
TOPBP1-202ENST00000503338 NWD2Q9ULI1 1742 aa10.43□□□□□ -0.74
TOPBP1-202ENST00000503338 BTBD11A6QL63 1104 aa10.42□□□□□ -0.74
TOPBP1-202ENST00000503338 BCAR3O75815 825 aa10.42□□□□□ -0.74
TOPBP1-202ENST00000503338 NKX1-1Q15270 411 aaPredicted RBP10.42□□□□□ -0.74
TOPBP1-202ENST00000503338 ZKSCAN2Q63HK3 967 aa10.42□□□□□ -0.74
TOPBP1-202ENST00000503338 MPRIPQ6WCQ1 1025 aa10.42□□□□□ -0.74
TOPBP1-202ENST00000503338 UNC5CLQ8IV45 518 aa10.42□□□□□ -0.74
TOPBP1-202ENST00000503338 ARHGAP45Q92619 1136 aa10.42□□□□□ -0.74
TOPBP1-202ENST00000503338 LGR6Q9HBX8 967 aa10.42□□□□□ -0.74
TOPBP1-202ENST00000503338 ADAMTS7Q9UKP4 1686 aa10.41□□□□□ -0.74
TOPBP1-202ENST00000503338 ERVV-2B6SEH9 535 aa10.41□□□□□ -0.74
TOPBP1-202ENST00000503338 HSPA1LP34931 641 aa10.41□□□□□ -0.74
TOPBP1-202ENST00000503338 BARGINQ6ZT62 677 aa10.41□□□□□ -0.74
TOPBP1-202ENST00000503338 FNBP4Q8N3X1 1017 aaPredicted RBP10.41□□□□□ -0.74
TOPBP1-202ENST00000503338 SSH1Q8WYL5 1049 aa10.41□□□□□ -0.74
TOPBP1-202ENST00000503338 NGLY1Q96IV0 654 aa10.41□□□□□ -0.74
TOPBP1-202ENST00000503338 SLC52A2Q9HAB3 445 aa10.41□□□□□ -0.74
TOPBP1-202ENST00000503338 DISP2A7MBM2 1401 aa10.41□□□□□ -0.74
TOPBP1-202ENST00000503338 PLCH1Q4KWH8 1693 aa10.41□□□□□ -0.74
TOPBP1-202ENST00000503338 SPATA31A1Q5TZJ5 1347 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms