RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 SGIP1Q9BQI5 828 aa19.66■□□□□ 0.74
CLDND1-206ENST00000502299 RTL1A6NKG5 1358 aa19.66■□□□□ 0.74
CLDND1-206ENST00000502299 KIF24Q5T7B8 1368 aa19.66■□□□□ 0.74
CLDND1-206ENST00000502299 MORC1Q86VD1 984 aa19.65■□□□□ 0.74
CLDND1-206ENST00000502299 SYT17Q9BSW7 474 aa19.64■□□□□ 0.73
CLDND1-206ENST00000502299 FHDC1Q9C0D6 1143 aaPredicted RBP19.64■□□□□ 0.73
CLDND1-206ENST00000502299 IL2RBP14784 551 aa19.63■□□□□ 0.73
CLDND1-206ENST00000502299 TNNT2P45379 298 aaPredicted RBP19.63■□□□□ 0.73
CLDND1-206ENST00000502299 AMER1Q5JTC6 1135 aaPredicted RBP19.63■□□□□ 0.73
CLDND1-206ENST00000502299 MTFR1LQ9H019 292 aa19.63■□□□□ 0.73
CLDND1-206ENST00000502299 FLT4P35916 1363 aa19.62■□□□□ 0.73
CLDND1-206ENST00000502299 PPM1GO15355 546 aaPredicted RBP19.62■□□□□ 0.73
CLDND1-206ENST00000502299 HSP90AB2PQ58FF8 381 aa19.62■□□□□ 0.73
CLDND1-206ENST00000502299 POLKQ9UBT6 870 aa19.62■□□□□ 0.73
CLDND1-206ENST00000502299 EMILIN1Q9Y6C2 1016 aa19.62■□□□□ 0.73
CLDND1-206ENST00000502299 NHSQ6T4R5 1651 aa19.62■□□□□ 0.73
CLDND1-206ENST00000502299 INSRP06213 1382 aa19.61■□□□□ 0.73
CLDND1-206ENST00000502299 LRRC4BQ9NT99 713 aa19.6■□□□□ 0.73
CLDND1-206ENST00000502299 PAPPAQ13219 1627 aa19.59■□□□□ 0.73
CLDND1-206ENST00000502299 ZNF827Q17R98 1081 aa19.59■□□□□ 0.73
CLDND1-206ENST00000502299 ANKRD26Q9UPS8 1709 aa19.59■□□□□ 0.73
CLDND1-206ENST00000502299 SMG6Q86US8 1419 aaKnown RBP19.59■□□□□ 0.73
CLDND1-206ENST00000502299 ZNF784Q8NCA9 323 aaPredicted RBP19.58■□□□□ 0.72
CLDND1-206ENST00000502299 MAP2P11137 1827 aaKnown RBP19.56■□□□□ 0.72
CLDND1-206ENST00000502299 CC2D1BQ5T0F9 858 aaKnown RBP19.56■□□□□ 0.72
CLDND1-206ENST00000502299 NBPF6Q5VWK0 638 aa19.56■□□□□ 0.72
CLDND1-206ENST00000502299 NBPF4Q96M43 638 aa19.56■□□□□ 0.72
CLDND1-206ENST00000502299 ARXQ96QS3 562 aa19.56■□□□□ 0.72
CLDND1-206ENST00000502299 NPC1L1Q9UHC9 1359 aa19.56■□□□□ 0.72
CLDND1-206ENST00000502299 FAM208AQ9UK61 1670 aaKnown RBP19.55■□□□□ 0.72
CLDND1-206ENST00000502299 BTAF1O14981 1849 aa19.53■□□□□ 0.72
CLDND1-206ENST00000502299 DDX54Q8TDD1 881 aaKnown RBP19.53■□□□□ 0.72
CLDND1-206ENST00000502299 AKT1S1Q96B36 256 aa19.53■□□□□ 0.72
CLDND1-206ENST00000502299 MAP3K5Q99683 1374 aa19.52■□□□□ 0.72
CLDND1-206ENST00000502299 KCNQ4P56696 695 aa19.5■□□□□ 0.71
CLDND1-206ENST00000502299 CNGB1Q14028 1251 aaPredicted RBP19.5■□□□□ 0.71
CLDND1-206ENST00000502299 RAPGEF4Q8WZA2 1011 aa19.5■□□□□ 0.71
CLDND1-206ENST00000502299 EIF4A2Q14240 407 aaKnown RBP19.49■□□□□ 0.71
CLDND1-206ENST00000502299 SLC27A3Q5K4L6 730 aa19.49■□□□□ 0.71
CLDND1-206ENST00000502299 USHBP1Q8N6Y0 703 aa19.49■□□□□ 0.71
CLDND1-206ENST00000502299 EYA1Q99502 592 aa19.49■□□□□ 0.71
CLDND1-206ENST00000502299 PNPLA7Q6ZV29 1317 aa19.49■□□□□ 0.71
CLDND1-206ENST00000502299 TATP17735 454 aaPredicted RBP19.48■□□□□ 0.71
CLDND1-206ENST00000502299 MTHFSP49914 203 aa19.48■□□□□ 0.71
CLDND1-206ENST00000502299 PRIM1P49642 420 aaKnown RBP19.47■□□□□ 0.71
CLDND1-206ENST00000502299 ZCRB1Q8TBF4 217 aaKnown RBP19.47■□□□□ 0.71
CLDND1-206ENST00000502299 RGPD2P0DJD1 1756 aa19.47■□□□□ 0.71
CLDND1-206ENST00000502299 SLC16A10Q8TF71 515 aa19.46■□□□□ 0.71
CLDND1-206ENST00000502299 SYTL4Q96C24 671 aaPredicted RBP19.46■□□□□ 0.71
CLDND1-206ENST00000502299 GOLGB1Q14789 3259 aaKnown RBP19.44■□□□□ 0.7
CLDND1-206ENST00000502299 TFCP2L1Q9NZI6 479 aa19.44■□□□□ 0.7
CLDND1-206ENST00000502299 MEGF6O75095 1541 aa19.43■□□□□ 0.7
CLDND1-206ENST00000502299 DDX10Q13206 875 aaKnown RBP19.43■□□□□ 0.7
CLDND1-206ENST00000502299 GPR162Q16538 588 aa19.43■□□□□ 0.7
CLDND1-206ENST00000502299 KLHL34Q8N239 644 aa19.43■□□□□ 0.7
CLDND1-206ENST00000502299 POLD1P28340 1107 aa19.42■□□□□ 0.7
CLDND1-206ENST00000502299 NCAPD2Q15021 1401 aa19.42■□□□□ 0.7
CLDND1-206ENST00000502299 KAT6BQ8WYB5 2073 aa19.41■□□□□ 0.7
CLDND1-206ENST00000502299 IL13P35225 146 aa19.41■□□□□ 0.7
CLDND1-206ENST00000502299 NLGN2Q8NFZ4 835 aa19.41■□□□□ 0.7
CLDND1-206ENST00000502299 IGSF1Q8N6C5 1336 aa19.41■□□□□ 0.7
CLDND1-206ENST00000502299 SPG7Q9UQ90 795 aa19.4■□□□□ 0.7
CLDND1-206ENST00000502299 DIAPH1O60610 1272 aaKnown RBP19.39■□□□□ 0.69
CLDND1-206ENST00000502299 C1QTNF8P60827 252 aa19.39■□□□□ 0.69
CLDND1-206ENST00000502299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.39■□□□□ 0.69
CLDND1-206ENST00000502299 CCNL1Q9UK58 526 aaPredicted RBP19.39■□□□□ 0.69
CLDND1-206ENST00000502299 COL24A1Q17RW2 1714 aa19.39■□□□□ 0.69
CLDND1-206ENST00000502299 QSER1Q2KHR3 1735 aa19.39■□□□□ 0.69
CLDND1-206ENST00000502299 DOT1LQ8TEK3 1739 aa19.38■□□□□ 0.69
CLDND1-206ENST00000502299 SHANK3Q9BYB0 1731 aa19.38■□□□□ 0.69
CLDND1-206ENST00000502299 PCDH11XQ9BZA7 1347 aa19.38■□□□□ 0.69
CLDND1-206ENST00000502299 PCDH11YQ9BZA8 1340 aa19.38■□□□□ 0.69
CLDND1-206ENST00000502299 CHD4Q14839 1912 aa19.37■□□□□ 0.69
CLDND1-206ENST00000502299 PPP2R1AP30153 589 aa19.37■□□□□ 0.69
CLDND1-206ENST00000502299 COL23A1Q86Y22 540 aaPredicted RBP19.37■□□□□ 0.69
CLDND1-206ENST00000502299 PELP1Q8IZL8 1130 aaKnown RBP19.37■□□□□ 0.69
CLDND1-206ENST00000502299 CFAP53Q96M91 514 aa19.37■□□□□ 0.69
CLDND1-206ENST00000502299 SENP3-EIF4A1A0A087X0R7 540 aa19.36■□□□□ 0.69
CLDND1-206ENST00000502299 SULT6B1Q6IMI4 303 aa19.36■□□□□ 0.69
CLDND1-206ENST00000502299 TUBGCP6Q96RT7 1819 aa19.36■□□□□ 0.69
CLDND1-206ENST00000502299 LY75O60449 1722 aa19.36■□□□□ 0.69
CLDND1-206ENST00000502299 PLEKHG2Q9H7P9 1386 aa19.34■□□□□ 0.69
CLDND1-206ENST00000502299 ZNF316A6NFI3 1004 aaPredicted RBP19.34■□□□□ 0.69
CLDND1-206ENST00000502299 YBX3P16989 372 aaKnown RBP eCLIP19.34■□□□□ 0.69
CLDND1-206ENST00000502299 PLEKHO1Q53GL0 409 aaPredicted RBP19.34■□□□□ 0.69
CLDND1-206ENST00000502299 CYP27B1O15528 508 aa19.33■□□□□ 0.68
CLDND1-206ENST00000502299 AMOTQ4VCS5 1084 aa19.33■□□□□ 0.68
CLDND1-206ENST00000502299 MSH5O43196 834 aa19.32■□□□□ 0.68
CLDND1-206ENST00000502299 RALBP1Q15311 655 aa19.32■□□□□ 0.68
CLDND1-206ENST00000502299 AEBP1Q8IUX7 1158 aa19.32■□□□□ 0.68
CLDND1-206ENST00000502299 IFNL2Q8IZJ0 200 aa19.32■□□□□ 0.68
CLDND1-206ENST00000502299 NKX1-1Q15270 411 aaPredicted RBP19.31■□□□□ 0.68
CLDND1-206ENST00000502299 MSL1Q68DK7 614 aa19.31■□□□□ 0.68
CLDND1-206ENST00000502299 NUDCQ9Y266 331 aa19.31■□□□□ 0.68
CLDND1-206ENST00000502299 KDRP35968 1356 aa19.31■□□□□ 0.68
CLDND1-206ENST00000502299 U2SURPO15042 1029 aaKnown RBP19.3■□□□□ 0.68
CLDND1-206ENST00000502299 GIGYF1O75420 1035 aaPredicted RBP19.29■□□□□ 0.68
CLDND1-206ENST00000502299 HMOX1P09601 288 aa19.29■□□□□ 0.68
CLDND1-206ENST00000502299 PHKG2P15735 406 aa19.29■□□□□ 0.68
CLDND1-206ENST00000502299 MPRIPQ6WCQ1 1025 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms