RNA–Protein interactions for RNA: ENST00000502250.5

ATXN3-206, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-206ENST00000502250 NOD1Q9Y239 953 aa11.59□□□□□ -0.55
ATXN3-206ENST00000502250 TRIM50Q86XT4 487 aa11.58□□□□□ -0.56
ATXN3-206ENST00000502250 DEPDC4Q8N2C3 294 aa11.58□□□□□ -0.56
ATXN3-206ENST00000502250 MEIOBQ8N635 442 aa11.58□□□□□ -0.56
ATXN3-206ENST00000502250 ESF1Q9H501 851 aaKnown RBP11.58□□□□□ -0.56
ATXN3-206ENST00000502250 ATP5J2-PTCD1G3V325 749 aa11.57□□□□□ -0.56
ATXN3-206ENST00000502250 OSBPL3Q9H4L5 887 aa11.57□□□□□ -0.56
ATXN3-206ENST00000502250 ADH1AP07327 375 aa11.56□□□□□ -0.56
ATXN3-206ENST00000502250 ADD1P35611 737 aaKnown RBP11.56□□□□□ -0.56
ATXN3-206ENST00000502250 CYP2U1Q7Z449 544 aa11.56□□□□□ -0.56
ATXN3-206ENST00000502250 AXIN1O15169 862 aa11.55□□□□□ -0.56
ATXN3-206ENST00000502250 KANK4Q5T7N3 995 aaPredicted RBP11.55□□□□□ -0.56
ATXN3-206ENST00000502250 MKRN1Q9UHC7 482 aaKnown RBP11.55□□□□□ -0.56
ATXN3-206ENST00000502250 ATP1A2P50993 1020 aa11.54□□□□□ -0.56
ATXN3-206ENST00000502250 SRPK2P78362 688 aaKnown RBP11.54□□□□□ -0.56
ATXN3-206ENST00000502250 CBLBQ13191 982 aa11.54□□□□□ -0.56
ATXN3-206ENST00000502250 PBXIP1Q96AQ6 731 aa11.54□□□□□ -0.56
ATXN3-206ENST00000502250 PPP1R15AO75807 674 aaPredicted RBP11.53□□□□□ -0.56
ATXN3-206ENST00000502250 VRTNQ9H8Y1 702 aa11.53□□□□□ -0.56
ATXN3-206ENST00000502250 GNRH1P01148 92 aa11.52□□□□□ -0.57
ATXN3-206ENST00000502250 GTF2IP78347 998 aa11.52□□□□□ -0.57
ATXN3-206ENST00000502250 TSEN34Q9BSV6 310 aaKnown RBP11.52□□□□□ -0.57
ATXN3-206ENST00000502250 AAASQ9NRG9 546 aa11.52□□□□□ -0.57
ATXN3-206ENST00000502250 PCDHGA11Q9Y5H2 935 aa11.52□□□□□ -0.57
ATXN3-206ENST00000502250 RFX1P22670 979 aa11.51□□□□□ -0.57
ATXN3-206ENST00000502250 KDF1Q8NAX2 398 aaPredicted RBP11.51□□□□□ -0.57
ATXN3-206ENST00000502250 FAM196BA6NMK8 535 aa11.5□□□□□ -0.57
ATXN3-206ENST00000502250 LARGE2Q8N3Y3 721 aa11.5□□□□□ -0.57
ATXN3-206ENST00000502250 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.49□□□□□ -0.57
ATXN3-206ENST00000502250 UPP2O95045 317 aa11.49□□□□□ -0.57
ATXN3-206ENST00000502250 PTGIRP43119 386 aa11.49□□□□□ -0.57
ATXN3-206ENST00000502250 CLDN10P78369 228 aa11.49□□□□□ -0.57
ATXN3-206ENST00000502250 MRPL14Q6P1L8 145 aaKnown RBP11.49□□□□□ -0.57
ATXN3-206ENST00000502250 Q6ZNB5 142 aa11.49□□□□□ -0.57
ATXN3-206ENST00000502250 LINC00528Q8N1L1 170 aa11.49□□□□□ -0.57
ATXN3-206ENST00000502250 OGFOD1Q8N543 542 aa11.49□□□□□ -0.57
ATXN3-206ENST00000502250 ARID3AQ99856 593 aa11.49□□□□□ -0.57
ATXN3-206ENST00000502250 DNAAF2Q9NVR5 837 aaKnown RBP11.49□□□□□ -0.57
ATXN3-206ENST00000502250 WASLO00401 505 aaPredicted RBP11.48□□□□□ -0.57
ATXN3-206ENST00000502250 RASA1P20936 1047 aa11.48□□□□□ -0.57
ATXN3-206ENST00000502250 SIX5Q8N196 739 aa11.48□□□□□ -0.57
ATXN3-206ENST00000502250 ST8SIA5O15466 376 aa11.47□□□□□ -0.57
ATXN3-206ENST00000502250 ATG7O95352 703 aa11.47□□□□□ -0.57
ATXN3-206ENST00000502250 LARP1Q6PKG0 1096 aaKnown RBP11.47□□□□□ -0.57
ATXN3-206ENST00000502250 AGBL1Q96MI9 1066 aa11.47□□□□□ -0.57
ATXN3-206ENST00000502250 USP17L15C9J2P7 530 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 USP17L10C9JJH3 530 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 USP17L13C9JLJ4 530 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 USP17L12C9JPN9 530 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 USP17L11C9JVI0 530 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 USP17L21D6R901 530 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 USP17L18D6R9N7 530 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 USP17L22D6RA61 530 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 USP17L17D6RBQ6 530 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 USP17L19D6RCP7 530 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 USP17L20D6RJB6 530 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
ATXN3-206ENST00000502250 SPINT1O43278 529 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 RELBQ01201 579 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 USP17L24Q0WX57 530 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 PTK7Q13308 1070 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 ESCO1Q5FWF5 840 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 TRIM46Q7Z4K8 759 aa11.46□□□□□ -0.57
ATXN3-206ENST00000502250 SCNN1DP51172 638 aa11.45□□□□□ -0.58
ATXN3-206ENST00000502250 PSME1Q06323 249 aa11.45□□□□□ -0.58
ATXN3-206ENST00000502250 CLN3Q13286 438 aa11.45□□□□□ -0.58
ATXN3-206ENST00000502250 SCARF1Q14162 830 aa11.45□□□□□ -0.58
ATXN3-206ENST00000502250 ELOAQ14241 798 aaKnown RBP11.45□□□□□ -0.58
ATXN3-206ENST00000502250 CRTC2Q53ET0 693 aaPredicted RBP11.45□□□□□ -0.58
ATXN3-206ENST00000502250 ATP13A2Q9NQ11 1180 aa11.45□□□□□ -0.58
ATXN3-206ENST00000502250 BMP1P13497 986 aa11.44□□□□□ -0.58
ATXN3-206ENST00000502250 CCDC102BQ68D86 513 aa11.44□□□□□ -0.58
ATXN3-206ENST00000502250 ARHGEF10LQ9HCE6 1279 aa11.44□□□□□ -0.58
ATXN3-206ENST00000502250 KIAA1024Q9UPX6 916 aa11.44□□□□□ -0.58
ATXN3-206ENST00000502250 A0A1W2PRU2 124 aa11.43□□□□□ -0.58
ATXN3-206ENST00000502250 DKK1O94907 266 aa11.43□□□□□ -0.58
ATXN3-206ENST00000502250 INHAP05111 366 aa11.43□□□□□ -0.58
ATXN3-206ENST00000502250 GDF10P55107 478 aa11.43□□□□□ -0.58
ATXN3-206ENST00000502250 TPCN2Q8NHX9 752 aa11.43□□□□□ -0.58
ATXN3-206ENST00000502250 XAGE2Q96GT9 111 aa11.43□□□□□ -0.58
ATXN3-206ENST00000502250 ETNK1Q9HBU6 452 aa11.43□□□□□ -0.58
ATXN3-206ENST00000502250 LCE2BO14633 110 aa11.42□□□□□ -0.58
ATXN3-206ENST00000502250 BMP2P12643 396 aa11.42□□□□□ -0.58
ATXN3-206ENST00000502250 GPC1P35052 558 aa11.42□□□□□ -0.58
ATXN3-206ENST00000502250 ZNF594Q96JF6 807 aaPredicted RBP11.42□□□□□ -0.58
ATXN3-206ENST00000502250 ESYT1Q9BSJ8 1104 aa11.42□□□□□ -0.58
ATXN3-206ENST00000502250 TMEM229AB2RXF0 380 aa11.41□□□□□ -0.58
ATXN3-206ENST00000502250 M0R2N6 131 aa11.41□□□□□ -0.58
ATXN3-206ENST00000502250 IL2RAP01589 272 aa11.41□□□□□ -0.58
ATXN3-206ENST00000502250 CDCA8Q53HL2 280 aa11.41□□□□□ -0.58
ATXN3-206ENST00000502250 ANKMY2Q8IV38 441 aa11.41□□□□□ -0.58
ATXN3-206ENST00000502250 ZNF395Q9H8N7 513 aaPredicted RBP11.41□□□□□ -0.58
ATXN3-206ENST00000502250 RBM19Q9Y4C8 960 aaKnown RBP11.41□□□□□ -0.58
ATXN3-206ENST00000502250 HRH3Q9Y5N1 445 aa11.41□□□□□ -0.58
ATXN3-206ENST00000502250 CNKSR1Q969H4 720 aa11.4□□□□□ -0.58
ATXN3-206ENST00000502250 SLC4A9Q96Q91 983 aa11.4□□□□□ -0.58
ATXN3-206ENST00000502250 PURBQ96QR8 312 aaKnown RBP11.4□□□□□ -0.58
ATXN3-206ENST00000502250 ARXQ96QS3 562 aa11.4□□□□□ -0.58
ATXN3-206ENST00000502250 DACH1Q9UI36 760 aa11.4□□□□□ -0.58
ATXN3-206ENST00000502250 BACH1O14867 736 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms