RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 BCL11BQ9C0K0 894 aaPredicted RBP14.33□□□□□ -0.12
FXR1-222ENST00000498658 PER1O15534 1290 aaPredicted RBP14.31□□□□□ -0.12
FXR1-222ENST00000498658 TATP17735 454 aaPredicted RBP14.31□□□□□ -0.12
FXR1-222ENST00000498658 ZCRB1Q8TBF4 217 aaKnown RBP14.31□□□□□ -0.12
FXR1-222ENST00000498658 NPC1L1Q9UHC9 1359 aa14.31□□□□□ -0.12
FXR1-222ENST00000498658 RGPD2P0DJD1 1756 aa14.3□□□□□ -0.12
FXR1-222ENST00000498658 SBF2Q86WG5 1849 aa14.3□□□□□ -0.12
FXR1-222ENST00000498658 CAMKK2Q96RR4 588 aa14.3□□□□□ -0.12
FXR1-222ENST00000498658 PLSCR1O15162 318 aa14.29□□□□□ -0.12
FXR1-222ENST00000498658 EZH2Q15910 746 aaKnown RBP14.28□□□□□ -0.12
FXR1-222ENST00000498658 USHBP1Q8N6Y0 703 aa14.28□□□□□ -0.12
FXR1-222ENST00000498658 DDX54Q8TDD1 881 aaKnown RBP14.28□□□□□ -0.12
FXR1-222ENST00000498658 MEGF6O75095 1541 aa14.27□□□□□ -0.12
FXR1-222ENST00000498658 PLEKHG2Q9H7P9 1386 aa14.27□□□□□ -0.12
FXR1-222ENST00000498658 ZEB1P37275 1124 aaPredicted RBP14.27□□□□□ -0.13
FXR1-222ENST00000498658 RGPD3A6NKT7 1758 aaPredicted RBP14.27□□□□□ -0.13
FXR1-222ENST00000498658 RGPD4Q7Z3J3 1758 aa14.27□□□□□ -0.13
FXR1-222ENST00000498658 NCAPD2Q15021 1401 aa14.26□□□□□ -0.13
FXR1-222ENST00000498658 PCDH11XQ9BZA7 1347 aa14.26□□□□□ -0.13
FXR1-222ENST00000498658 PCDH11YQ9BZA8 1340 aa14.26□□□□□ -0.13
FXR1-222ENST00000498658 EIF4A2Q14240 407 aaKnown RBP14.26□□□□□ -0.13
FXR1-222ENST00000498658 CC2D1BQ5T0F9 858 aaKnown RBP14.26□□□□□ -0.13
FXR1-222ENST00000498658 NBPF14Q5TI25 921 aa14.26□□□□□ -0.13
FXR1-222ENST00000498658 EYA1Q99502 592 aa14.26□□□□□ -0.13
FXR1-222ENST00000498658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.26□□□□□ -0.131e-9■■□□□ 13.7
FXR1-222ENST00000498658 ZBTB22O15209 634 aa14.25□□□□□ -0.13
FXR1-222ENST00000498658 SPG7Q9UQ90 795 aa14.25□□□□□ -0.13
FXR1-222ENST00000498658 NHSQ6T4R5 1651 aa14.25□□□□□ -0.13
FXR1-222ENST00000498658 KAT6BQ8WYB5 2073 aa14.24□□□□□ -0.13
FXR1-222ENST00000498658 IGSF1Q8N6C5 1336 aa14.23□□□□□ -0.13
FXR1-222ENST00000498658 ACSBG1Q96GR2 724 aa14.23□□□□□ -0.13
FXR1-222ENST00000498658 RREB1Q92766 1687 aa14.23□□□□□ -0.13
FXR1-222ENST00000498658 KCNQ2O43526 872 aa14.22□□□□□ -0.13
FXR1-222ENST00000498658 MTHFSP49914 203 aa14.22□□□□□ -0.13
FXR1-222ENST00000498658 HMGB2P26583 209 aaKnown RBP14.21□□□□□ -0.13
FXR1-222ENST00000498658 PTF1AQ7RTS3 328 aa14.21□□□□□ -0.13
FXR1-222ENST00000498658 SYTL4Q96C24 671 aaPredicted RBP14.21□□□□□ -0.13
FXR1-222ENST00000498658 PKD1L3Q7Z443 1732 aa14.21□□□□□ -0.14
FXR1-222ENST00000498658 SHANK3Q9BYB0 1731 aa14.21□□□□□ -0.14
FXR1-222ENST00000498658 IL13P35225 146 aa14.2□□□□□ -0.14
FXR1-222ENST00000498658 PRIM1P49642 420 aaKnown RBP14.2□□□□□ -0.14
FXR1-222ENST00000498658 AMOTQ4VCS5 1084 aa14.2□□□□□ -0.14
FXR1-222ENST00000498658 TXNRD1Q16881 649 aa14.19□□□□□ -0.14
FXR1-222ENST00000498658 PLEKHO1Q53GL0 409 aaPredicted RBP14.19□□□□□ -0.14
FXR1-222ENST00000498658 NUP188Q5SRE5 1749 aa14.18□□□□□ -0.14
FXR1-222ENST00000498658 BTAF1O14981 1849 aa14.18□□□□□ -0.14
FXR1-222ENST00000498658 CYP27B1O15528 508 aa14.18□□□□□ -0.14
FXR1-222ENST00000498658 DIAPH1O60610 1272 aaKnown RBP14.18□□□□□ -0.14
FXR1-222ENST00000498658 HSP90AB1P08238 724 aaKnown RBP14.18□□□□□ -0.14
FXR1-222ENST00000498658 R3HDM1Q15032 1099 aaKnown RBP14.18□□□□□ -0.14
FXR1-222ENST00000498658 NKX1-1Q15270 411 aaPredicted RBP14.18□□□□□ -0.14
FXR1-222ENST00000498658 SLC27A3Q5K4L6 730 aa14.18□□□□□ -0.14
FXR1-222ENST00000498658 IFNL2Q8IZJ0 200 aa14.18□□□□□ -0.14
FXR1-222ENST00000498658 CFAP53Q96M91 514 aa14.18□□□□□ -0.14
FXR1-222ENST00000498658 DOT1LQ8TEK3 1739 aa14.18□□□□□ -0.14
FXR1-222ENST00000498658 PSDA5PKW4 1024 aaPredicted RBP14.17□□□□□ -0.14
FXR1-222ENST00000498658 MYCNP04198 464 aaPredicted RBP14.17□□□□□ -0.14
FXR1-222ENST00000498658 SULT6B1Q6IMI4 303 aa14.17□□□□□ -0.14
FXR1-222ENST00000498658 PROM2Q8N271 834 aa14.17□□□□□ -0.14
FXR1-222ENST00000498658 KDRP35968 1356 aa14.17□□□□□ -0.14
FXR1-222ENST00000498658 CNGB1Q14028 1251 aaPredicted RBP14.16□□□□□ -0.14
FXR1-222ENST00000498658 SRCAPQ6ZRS2 3230 aa14.16□□□□□ -0.14
FXR1-222ENST00000498658 PHKG2P15735 406 aa14.15□□□□□ -0.14
FXR1-222ENST00000498658 STK32BQ9NY57 414 aa14.15□□□□□ -0.14
FXR1-222ENST00000498658 MPRIPQ6WCQ1 1025 aa14.14□□□□□ -0.15
FXR1-222ENST00000498658 SMARCC1Q92922 1105 aaPredicted RBP14.14□□□□□ -0.15
FXR1-222ENST00000498658 C1orf141Q5JVX7 400 aa14.13□□□□□ -0.15
FXR1-222ENST00000498658 AEBP1Q8IUX7 1158 aa14.13□□□□□ -0.15
FXR1-222ENST00000498658 DCAF5Q96JK2 942 aa14.13□□□□□ -0.15
FXR1-222ENST00000498658 NUDCQ9Y266 331 aa14.13□□□□□ -0.15
FXR1-222ENST00000498658 PPP2R1AP30153 589 aa14.12□□□□□ -0.15
FXR1-222ENST00000498658 ZNF530Q6P9A1 599 aaPredicted RBP14.12□□□□□ -0.15
FXR1-222ENST00000498658 TMOD3Q9NYL9 352 aa14.12□□□□□ -0.15
FXR1-222ENST00000498658 ERVV-2B6SEH9 535 aa14.11□□□□□ -0.15
FXR1-222ENST00000498658 SLC15A2Q16348 729 aa14.11□□□□□ -0.15
FXR1-222ENST00000498658 U2SURPO15042 1029 aaKnown RBP14.1□□□□□ -0.15
FXR1-222ENST00000498658 HMOX1P09601 288 aa14.1□□□□□ -0.15
FXR1-222ENST00000498658 CCNL1Q9UK58 526 aaPredicted RBP14.1□□□□□ -0.15
FXR1-222ENST00000498658 COL3A1P02461 1466 aaPredicted RBP14.1□□□□□ -0.15
FXR1-222ENST00000498658 ITGB4P16144 1822 aa14.1□□□□□ -0.15
FXR1-222ENST00000498658 LY75O60449 1722 aa14.1□□□□□ -0.15
FXR1-222ENST00000498658 LRP5O75197 1615 aa14.09□□□□□ -0.15
FXR1-222ENST00000498658 RALBP1Q15311 655 aa14.09□□□□□ -0.15
FXR1-222ENST00000498658 AKAP4Q5JQC9 854 aa14.09□□□□□ -0.15
FXR1-222ENST00000498658 PIGBQ92521 554 aa14.09□□□□□ -0.15
FXR1-222ENST00000498658 ANO8Q9HCE9 1232 aaPredicted RBP14.09□□□□□ -0.15
FXR1-222ENST00000498658 LRRC4BQ9NT99 713 aa14.09□□□□□ -0.15
FXR1-222ENST00000498658 U3KPZ7 1027 aaPredicted RBP14.09□□□□□ -0.15
FXR1-222ENST00000498658 TOGARAM1Q9Y4F4 1720 aa14.09□□□□□ -0.15
FXR1-222ENST00000498658 PALLDQ8WX93 1383 aa14.09□□□□□ -0.15
FXR1-222ENST00000498658 DDX10Q13206 875 aaKnown RBP14.08□□□□□ -0.16
FXR1-222ENST00000498658 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
FXR1-222ENST00000498658 CABP4P57796 275 aa14.07□□□□□ -0.16
FXR1-222ENST00000498658 SPON1Q9HCB6 807 aa14.07□□□□□ -0.16
FXR1-222ENST00000498658 PAPPAQ13219 1627 aa14.07□□□□□ -0.16
FXR1-222ENST00000498658 GAS2L2Q8NHY3 880 aa14.05□□□□□ -0.16
FXR1-222ENST00000498658 AKT1S1Q96B36 256 aa14.05□□□□□ -0.16
FXR1-222ENST00000498658 FCHSD2O94868 740 aa14.04□□□□□ -0.16
FXR1-222ENST00000498658 U2AF1L5P0DN76 240 aaPredicted RBP14.04□□□□□ -0.16
FXR1-222ENST00000498658 U2AF1Q01081 240 aaKnown RBP eCLIP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms