RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 PTGER2P43116 358 aa31.4■■■□□ 2.62
CDKN2A-208ENST00000498124 LRRC4BQ9NT99 713 aa31.4■■■□□ 2.62
CDKN2A-208ENST00000498124 ANKRD26Q9UPS8 1709 aa31.4■■■□□ 2.62
CDKN2A-208ENST00000498124 FLT4P35916 1363 aa31.4■■■□□ 2.62
CDKN2A-208ENST00000498124 HSP90AB2PQ58FF8 381 aa31.39■■■□□ 2.62
CDKN2A-208ENST00000498124 USHBP1Q8N6Y0 703 aa31.39■■■□□ 2.62
CDKN2A-208ENST00000498124 KIF24Q5T7B8 1368 aa31.39■■■□□ 2.62
CDKN2A-208ENST00000498124 SMG6Q86US8 1419 aaKnown RBP31.39■■■□□ 2.62
CDKN2A-208ENST00000498124 ZCRB1Q8TBF4 217 aaKnown RBP31.38■■■□□ 2.61
CDKN2A-208ENST00000498124 ZNF827Q17R98 1081 aa31.37■■■□□ 2.61
CDKN2A-208ENST00000498124 LY75O60449 1722 aa31.35■■■□□ 2.61
CDKN2A-208ENST00000498124 ATF5Q9Y2D1 282 aaPredicted RBP31.34■■■□□ 2.61
CDKN2A-208ENST00000498124 PRIM1P49642 420 aaKnown RBP31.33■■■□□ 2.61
CDKN2A-208ENST00000498124 EMILIN1Q9Y6C2 1016 aa31.33■■■□□ 2.61
CDKN2A-208ENST00000498124 QSER1Q2KHR3 1735 aa31.32■■■□□ 2.61
CDKN2A-208ENST00000498124 CGNL1Q0VF96 1302 aa31.32■■■□□ 2.6
CDKN2A-208ENST00000498124 SGIP1Q9BQI5 828 aa31.32■■■□□ 2.6
CDKN2A-208ENST00000498124 NCAPD2Q15021 1401 aa31.31■■■□□ 2.6
CDKN2A-208ENST00000498124 AKT1S1Q96B36 256 aa31.3■■■□□ 2.6
CDKN2A-208ENST00000498124 SYTL4Q96C24 671 aaPredicted RBP31.3■■■□□ 2.6
CDKN2A-208ENST00000498124 MTFR1LQ9H019 292 aa31.3■■■□□ 2.6
CDKN2A-208ENST00000498124 TUBGCP6Q96RT7 1819 aa31.3■■■□□ 2.6
CDKN2A-208ENST00000498124 SLC27A3Q5K4L6 730 aa31.29■■■□□ 2.6
CDKN2A-208ENST00000498124 PKD1L3Q7Z443 1732 aa31.28■■■□□ 2.6
CDKN2A-208ENST00000498124 RAPGEF4Q8WZA2 1011 aa31.28■■■□□ 2.6
CDKN2A-208ENST00000498124 TOGARAM1Q9Y4F4 1720 aa31.26■■■□□ 2.59
CDKN2A-208ENST00000498124 TATP17735 454 aaPredicted RBP31.25■■■□□ 2.59
CDKN2A-208ENST00000498124 KCNQ4P56696 695 aa31.25■■■□□ 2.59
CDKN2A-208ENST00000498124 MAP2P11137 1827 aaKnown RBP31.24■■■□□ 2.59
CDKN2A-208ENST00000498124 COL24A1Q17RW2 1714 aa31.23■■■□□ 2.59
CDKN2A-208ENST00000498124 PCDH11XQ9BZA7 1347 aa31.23■■■□□ 2.59
CDKN2A-208ENST00000498124 PCDH11YQ9BZA8 1340 aa31.23■■■□□ 2.59
CDKN2A-208ENST00000498124 HSPA5P11021 654 aaKnown RBP31.22■■■□□ 2.59
CDKN2A-208ENST00000498124 UTRNP46939 3433 aa31.21■■■□□ 2.59
CDKN2A-208ENST00000498124 WASHC2AQ641Q2 1341 aa31.21■■■□□ 2.59
CDKN2A-208ENST00000498124 PNPLA7Q6ZV29 1317 aa31.21■■■□□ 2.59
CDKN2A-208ENST00000498124 FHDC1Q9C0D6 1143 aaPredicted RBP31.2■■■□□ 2.59
CDKN2A-208ENST00000498124 CYP27B1O15528 508 aa31.19■■■□□ 2.58
CDKN2A-208ENST00000498124 EIF4G2P78344 907 aaKnown RBP eCLIP31.19■■■□□ 2.58
CDKN2A-208ENST00000498124 POLR3GLQ9BT43 218 aa31.19■■■□□ 2.58
CDKN2A-208ENST00000498124 PPM1GO15355 546 aaPredicted RBP31.18■■■□□ 2.58
CDKN2A-208ENST00000498124 POLKQ9UBT6 870 aa31.18■■■□□ 2.58
CDKN2A-208ENST00000498124 SYT17Q9BSW7 474 aa31.16■■■□□ 2.58
CDKN2A-208ENST00000498124 ITGB4P16144 1822 aa31.15■■■□□ 2.58
CDKN2A-208ENST00000498124 CCNL1Q9UK58 526 aaPredicted RBP31.15■■■□□ 2.58
CDKN2A-208ENST00000498124 C5P01031 1676 aa31.14■■■□□ 2.58
CDKN2A-208ENST00000498124 ARXQ96QS3 562 aa31.14■■■□□ 2.58
CDKN2A-208ENST00000498124 MAP3K5Q99683 1374 aa31.14■■■□□ 2.58
CDKN2A-208ENST00000498124 EYA1Q99502 592 aa31.13■■■□□ 2.57
CDKN2A-208ENST00000498124 YY1P25490 414 aa31.12■■■□□ 2.57
CDKN2A-208ENST00000498124 SLC16A10Q8TF71 515 aa31.12■■■□□ 2.57
CDKN2A-208ENST00000498124 TFCP2L1Q9NZI6 479 aa31.12■■■□□ 2.57
CDKN2A-208ENST00000498124 TAF1LQ8IZX4 1826 aa31.1■■■□□ 2.57
CDKN2A-208ENST00000498124 PANK3Q9H999 370 aa31.1■■■□□ 2.57
CDKN2A-208ENST00000498124 PALLDQ8WX93 1383 aa31.09■■■□□ 2.57
CDKN2A-208ENST00000498124 DCAF8L1A6NGE4 600 aa31.08■■■□□ 2.57
CDKN2A-208ENST00000498124 TNNT2P45379 298 aaPredicted RBP31.08■■■□□ 2.57
CDKN2A-208ENST00000498124 NKX1-1Q15270 411 aaPredicted RBP31.08■■■□□ 2.57
CDKN2A-208ENST00000498124 EIF4A2Q14240 407 aaKnown RBP31.07■■■□□ 2.56
CDKN2A-208ENST00000498124 MPRIPQ6WCQ1 1025 aa31.07■■■□□ 2.56
CDKN2A-208ENST00000498124 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.03■■■□□ 2.56
CDKN2A-208ENST00000498124 SPG7Q9UQ90 795 aa31.03■■■□□ 2.56
CDKN2A-208ENST00000498124 GOLGB1Q14789 3259 aaKnown RBP31.02■■■□□ 2.56
CDKN2A-208ENST00000498124 COL23A1Q86Y22 540 aaPredicted RBP31.02■■■□□ 2.56
CDKN2A-208ENST00000498124 PIGBQ92521 554 aa31.02■■■□□ 2.56
CDKN2A-208ENST00000498124 C4BP0C0L5 1744 aa31.01■■■□□ 2.56
CDKN2A-208ENST00000498124 IGSF1Q8N6C5 1336 aa31■■■□□ 2.55
CDKN2A-208ENST00000498124 PLEKHG2Q9H7P9 1386 aa31■■■□□ 2.55
CDKN2A-208ENST00000498124 POLD1P28340 1107 aa30.99■■■□□ 2.55
CDKN2A-208ENST00000498124 PHKG2P15735 406 aa30.98■■■□□ 2.55
CDKN2A-208ENST00000498124 SMARCC1Q92922 1105 aaPredicted RBP30.97■■■□□ 2.55
CDKN2A-208ENST00000498124 AMIGO3Q86WK7 504 aa30.95■■■□□ 2.55
CDKN2A-208ENST00000498124 UBR3Q6ZT12 1888 aa30.95■■■□□ 2.54
CDKN2A-208ENST00000498124 IFNL2Q8IZJ0 200 aa30.94■■■□□ 2.54
CDKN2A-208ENST00000498124 MSH5O43196 834 aa30.91■■■□□ 2.54
CDKN2A-208ENST00000498124 MSL1Q68DK7 614 aa30.91■■■□□ 2.54
CDKN2A-208ENST00000498124 KLHL34Q8N239 644 aa30.91■■■□□ 2.54
CDKN2A-208ENST00000498124 NLGN2Q8NFZ4 835 aa30.91■■■□□ 2.54
CDKN2A-208ENST00000498124 TMOD3Q9NYL9 352 aa30.91■■■□□ 2.54
CDKN2A-208ENST00000498124 CHD4Q14839 1912 aa30.9■■■□□ 2.54
CDKN2A-208ENST00000498124 MORC1Q86VD1 984 aa30.9■■■□□ 2.54
CDKN2A-208ENST00000498124 KIF7Q2M1P5 1343 aa30.9■■■□□ 2.54
CDKN2A-208ENST00000498124 ASAP1Q9ULH1 1129 aa30.89■■■□□ 2.54
CDKN2A-208ENST00000498124 LOC102724428A0A0B4J2F2 783 aa30.88■■■□□ 2.53
CDKN2A-208ENST00000498124 SIK1P57059 783 aa30.88■■■□□ 2.53
CDKN2A-208ENST00000498124 LINC00116Q8NCU8 138 aa30.88■■■□□ 2.53
CDKN2A-208ENST00000498124 AMER1Q5JTC6 1135 aaPredicted RBP30.87■■■□□ 2.53
CDKN2A-208ENST00000498124 AEBP1Q8IUX7 1158 aa30.87■■■□□ 2.53
CDKN2A-208ENST00000498124 KDM6AO15550 1401 aaPredicted RBP30.87■■■□□ 2.53
CDKN2A-208ENST00000498124 HMGB2P26583 209 aaKnown RBP30.86■■■□□ 2.53
CDKN2A-208ENST00000498124 ITPK1Q13572 414 aa30.86■■■□□ 2.53
CDKN2A-208ENST00000498124 SMIM5Q71RC9 77 aa30.86■■■□□ 2.53
CDKN2A-208ENST00000498124 FLAD1Q8NFF5 587 aa30.86■■■□□ 2.53
CDKN2A-208ENST00000498124 KNSTRNQ9Y448 316 aa30.86■■■□□ 2.53
CDKN2A-208ENST00000498124 KDRP35968 1356 aa30.86■■■□□ 2.53
CDKN2A-208ENST00000498124 ZEB1P37275 1124 aaPredicted RBP30.85■■■□□ 2.53
CDKN2A-208ENST00000498124 AK7Q96M32 723 aa30.85■■■□□ 2.53
CDKN2A-208ENST00000498124 ATG3Q9NT62 314 aa30.85■■■□□ 2.53
CDKN2A-208ENST00000498124 ZNF831Q5JPB2 1677 aa30.82■■■□□ 2.52
CDKN2A-208ENST00000498124 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms