RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 LAMB4A4D0S4 1761 aa10.49□□□□□ -0.73
PDZRN3-212ENST00000498048 COL14A1Q05707 1796 aaKnown RBP10.49□□□□□ -0.73
PDZRN3-212ENST00000498048 COL16A1Q07092 1604 aaPredicted RBP10.49□□□□□ -0.73
PDZRN3-212ENST00000498048 ZBTB7CA1YPR0 619 aa10.49□□□□□ -0.73
PDZRN3-212ENST00000498048 CALD1Q05682 793 aaKnown RBP10.48□□□□□ -0.73
PDZRN3-212ENST00000498048 PHACTR3Q96KR7 559 aa10.48□□□□□ -0.73
PDZRN3-212ENST00000498048 C5P01031 1676 aa10.47□□□□□ -0.73
PDZRN3-212ENST00000498048 NRAPQ86VF7 1730 aa10.47□□□□□ -0.73
PDZRN3-212ENST00000498048 TSR2Q969E8 191 aaKnown RBP10.47□□□□□ -0.73
PDZRN3-212ENST00000498048 PLIN1O60240 522 aa10.46□□□□□ -0.73
PDZRN3-212ENST00000498048 PLEKHG5O94827 1062 aa10.46□□□□□ -0.73
PDZRN3-212ENST00000498048 CANXP27824 592 aaKnown RBP10.46□□□□□ -0.73
PDZRN3-212ENST00000498048 BRINP3Q76B58 766 aa10.46□□□□□ -0.73
PDZRN3-212ENST00000498048 IP6K1Q92551 441 aa10.46□□□□□ -0.73
PDZRN3-212ENST00000498048 DDX17Q92841 729 aaKnown RBP10.46□□□□□ -0.73
PDZRN3-212ENST00000498048 LTV1Q96GA3 475 aaPredicted RBP10.46□□□□□ -0.73
PDZRN3-212ENST00000498048 MAP3K5Q99683 1374 aa10.45□□□□□ -0.74
PDZRN3-212ENST00000498048 CT47B1P0C2W7 299 aaPredicted RBP10.45□□□□□ -0.74
PDZRN3-212ENST00000498048 B4GALNT3Q6L9W6 998 aa10.45□□□□□ -0.74
PDZRN3-212ENST00000498048 EYA1Q99502 592 aa10.45□□□□□ -0.74
PDZRN3-212ENST00000498048 NWD2Q9ULI1 1742 aa10.44□□□□□ -0.74
PDZRN3-212ENST00000498048 SPATA31A3Q5VYP0 1347 aa10.44□□□□□ -0.74
PDZRN3-212ENST00000498048 GCP02774 474 aa10.44□□□□□ -0.74
PDZRN3-212ENST00000498048 GAS2L2Q8NHY3 880 aa10.44□□□□□ -0.74
PDZRN3-212ENST00000498048 EXOC6Q8TAG9 804 aa10.44□□□□□ -0.74
PDZRN3-212ENST00000498048 CRBNQ96SW2 442 aa10.44□□□□□ -0.74
PDZRN3-212ENST00000498048 THUMPD2Q9BTF0 503 aaKnown RBP10.44□□□□□ -0.74
PDZRN3-212ENST00000498048 IFT57Q9NWB7 429 aa10.44□□□□□ -0.74
PDZRN3-212ENST00000498048 PAPPAQ13219 1627 aa10.44□□□□□ -0.74
PDZRN3-212ENST00000498048 GNAI1P63096 354 aa10.43□□□□□ -0.74
PDZRN3-212ENST00000498048 EXOSC9Q06265 439 aaKnown RBP10.43□□□□□ -0.74
PDZRN3-212ENST00000498048 ARHGEF25Q86VW2 580 aa10.43□□□□□ -0.74
PDZRN3-212ENST00000498048 CCDC136Q96JN2 1154 aa10.43□□□□□ -0.74
PDZRN3-212ENST00000498048 LAS1LQ9Y4W2 734 aaKnown RBP10.43□□□□□ -0.74
PDZRN3-212ENST00000498048 TOGARAM1Q9Y4F4 1720 aa10.43□□□□□ -0.74
PDZRN3-212ENST00000498048 OVOS2A0A0G2JMS6 1433 aa10.42□□□□□ -0.74
PDZRN3-212ENST00000498048 CRB1P82279 1406 aa10.42□□□□□ -0.74
PDZRN3-212ENST00000498048 ITGB4P16144 1822 aa10.42□□□□□ -0.74
PDZRN3-212ENST00000498048 UBR2Q8IWV8 1755 aa10.42□□□□□ -0.74
PDZRN3-212ENST00000498048 CPDO75976 1380 aa10.42□□□□□ -0.74
PDZRN3-212ENST00000498048 FAM83GA6ND36 823 aa10.42□□□□□ -0.74
PDZRN3-212ENST00000498048 SPDYE2BA6NHP3 402 aa10.42□□□□□ -0.74
PDZRN3-212ENST00000498048 BCAR3O75815 825 aa10.42□□□□□ -0.74
PDZRN3-212ENST00000498048 SPDYE6P0CI01 402 aa10.42□□□□□ -0.74
PDZRN3-212ENST00000498048 RARSP54136 660 aaKnown RBP10.42□□□□□ -0.74
PDZRN3-212ENST00000498048 SPDYE2Q495Y8 402 aa10.42□□□□□ -0.74
PDZRN3-212ENST00000498048 USHBP1Q8N6Y0 703 aa10.42□□□□□ -0.74
PDZRN3-212ENST00000498048 ERBB3P21860 1342 aa10.41□□□□□ -0.74
PDZRN3-212ENST00000498048 SOS2Q07890 1332 aaPredicted RBP10.41□□□□□ -0.74
PDZRN3-212ENST00000498048 KIF16BQ96L93 1317 aa10.41□□□□□ -0.74
PDZRN3-212ENST00000498048 C20orf194Q5TEA3 1177 aa10.41□□□□□ -0.74
PDZRN3-212ENST00000498048 ANKRD24Q8TF21 1146 aa10.41□□□□□ -0.74
PDZRN3-212ENST00000498048 BCL2L13Q9BXK5 485 aa10.41□□□□□ -0.74
PDZRN3-212ENST00000498048 SMC4Q9NTJ3 1288 aa10.41□□□□□ -0.74
PDZRN3-212ENST00000498048 AFDNP55196 1824 aaKnown RBP10.41□□□□□ -0.74
PDZRN3-212ENST00000498048 MEGF6O75095 1541 aa10.41□□□□□ -0.74
PDZRN3-212ENST00000498048 COL5A2P05997 1499 aaPredicted RBP10.41□□□□□ -0.74
PDZRN3-212ENST00000498048 KIAA0232Q92628 1395 aa10.4□□□□□ -0.74
PDZRN3-212ENST00000498048 DCTN1Q14203 1278 aa10.4□□□□□ -0.74
PDZRN3-212ENST00000498048 MTHFSDQ2M296 383 aaKnown RBP10.4□□□□□ -0.74
PDZRN3-212ENST00000498048 RTF1Q92541 710 aaKnown RBP10.4□□□□□ -0.74
PDZRN3-212ENST00000498048 MBIPQ9NS73 344 aa10.4□□□□□ -0.74
PDZRN3-212ENST00000498048 SLAIN2Q9P270 581 aa10.4□□□□□ -0.74
PDZRN3-212ENST00000498048 MRC1P22897 1456 aa10.4□□□□□ -0.74
PDZRN3-212ENST00000498048 PLEKHG2Q9H7P9 1386 aa10.39□□□□□ -0.75
PDZRN3-212ENST00000498048 DOT1LQ8TEK3 1739 aa10.39□□□□□ -0.75
PDZRN3-212ENST00000498048 ZNF853P0CG23 659 aa10.39□□□□□ -0.75
PDZRN3-212ENST00000498048 ZC3H6P61129 1189 aaKnown RBP10.39□□□□□ -0.75
PDZRN3-212ENST00000498048 MCM10Q7L590 875 aa10.39□□□□□ -0.75
PDZRN3-212ENST00000498048 FRAT1Q92837 279 aaPredicted RBP10.39□□□□□ -0.75
PDZRN3-212ENST00000498048 LRRC59Q96AG4 307 aaKnown RBP10.39□□□□□ -0.75
PDZRN3-212ENST00000498048 CFAP44Q96MT7 982 aa10.39□□□□□ -0.75
PDZRN3-212ENST00000498048 GNAT3A8MTJ3 354 aa10.37□□□□□ -0.75
PDZRN3-212ENST00000498048 GLI3P10071 1580 aa10.37□□□□□ -0.75
PDZRN3-212ENST00000498048 HAP1P54257 671 aaPredicted RBP10.37□□□□□ -0.75
PDZRN3-212ENST00000498048 PDE3AQ14432 1141 aa10.37□□□□□ -0.75
PDZRN3-212ENST00000498048 ALDH1L2Q3SY69 923 aa10.37□□□□□ -0.75
PDZRN3-212ENST00000498048 NBPF6Q5VWK0 638 aa10.37□□□□□ -0.75
PDZRN3-212ENST00000498048 FTSJ3Q8IY81 847 aaKnown RBP10.37□□□□□ -0.75
PDZRN3-212ENST00000498048 CABLES1Q8TDN4 633 aa10.37□□□□□ -0.75
PDZRN3-212ENST00000498048 ZNF428Q96B54 188 aa10.37□□□□□ -0.75
PDZRN3-212ENST00000498048 NBPF4Q96M43 638 aa10.37□□□□□ -0.75
PDZRN3-212ENST00000498048 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.36□□□□□ -0.75
PDZRN3-212ENST00000498048 HTATSF1O43719 755 aaKnown RBP10.36□□□□□ -0.75
PDZRN3-212ENST00000498048 TWISTNBQ3B726 338 aaPredicted RBP10.36□□□□□ -0.75
PDZRN3-212ENST00000498048 ZKSCAN2Q63HK3 967 aa10.36□□□□□ -0.75
PDZRN3-212ENST00000498048 SSH1Q8WYL5 1049 aa10.36□□□□□ -0.75
PDZRN3-212ENST00000498048 ARFGEF2Q9Y6D5 1785 aa10.36□□□□□ -0.75
PDZRN3-212ENST00000498048 KAT6BQ8WYB5 2073 aa10.35□□□□□ -0.75
PDZRN3-212ENST00000498048 CSB-PGBD3P0DP91 1061 aa10.35□□□□□ -0.75
PDZRN3-212ENST00000498048 MS4A1P11836 297 aa10.35□□□□□ -0.75
PDZRN3-212ENST00000498048 CHRNA2Q15822 529 aa10.35□□□□□ -0.75
PDZRN3-212ENST00000498048 ZNF530Q6P9A1 599 aaPredicted RBP10.35□□□□□ -0.75
PDZRN3-212ENST00000498048 PANK1Q8TE04 598 aa10.35□□□□□ -0.75
PDZRN3-212ENST00000498048 PRDM11Q9NQV5 511 aa10.35□□□□□ -0.75
PDZRN3-212ENST00000498048 TSPYL4Q9UJ04 414 aa10.35□□□□□ -0.75
PDZRN3-212ENST00000498048 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
PDZRN3-212ENST00000498048 CEMIPQ8WUJ3 1361 aa10.35□□□□□ -0.75
PDZRN3-212ENST00000498048 PLEKHO1Q53GL0 409 aaPredicted RBP10.34□□□□□ -0.75
PDZRN3-212ENST00000498048 TNNQ9UQP3 1299 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms