RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 GSK3AP49840 483 aa9.81□□□□□ -0.84
SMC4-227ENST00000497984 CUEDC1Q9NWM3 386 aaPredicted RBP9.81□□□□□ -0.84
SMC4-227ENST00000497984 ATP5J2-PTCD1G3V325 749 aa9.8□□□□□ -0.84
SMC4-227ENST00000497984 ZNF385CQ66K41 422 aaPredicted RBP9.8□□□□□ -0.84
SMC4-227ENST00000497984 CCDC125Q86Z20 511 aa9.8□□□□□ -0.84
SMC4-227ENST00000497984 SLURP2P0DP57 97 aa9.79□□□□□ -0.84
SMC4-227ENST00000497984 KCNMA1Q12791 1236 aa9.79□□□□□ -0.84
SMC4-227ENST00000497984 CC2D2BQ6DHV5 1058 aa9.79□□□□□ -0.84
SMC4-227ENST00000497984 PRICKLE2Q7Z3G6 844 aa9.79□□□□□ -0.84
SMC4-227ENST00000497984 TRIM52Q96A61 297 aa9.79□□□□□ -0.84
SMC4-227ENST00000497984 RHOQP17081 205 aa9.78□□□□□ -0.84
SMC4-227ENST00000497984 GPC1P35052 558 aa9.78□□□□□ -0.84
SMC4-227ENST00000497984 MCCD1P59942 119 aaPredicted RBP9.78□□□□□ -0.84
SMC4-227ENST00000497984 WHAMMQ8TF30 809 aa9.78□□□□□ -0.84
SMC4-227ENST00000497984 SNRKQ9NRH2 765 aa9.78□□□□□ -0.84
SMC4-227ENST00000497984 ADAMTS8Q9UP79 889 aa9.78□□□□□ -0.84
SMC4-227ENST00000497984 A0A1W2PRU2 124 aa9.77□□□□□ -0.85
SMC4-227ENST00000497984 SCTRP47872 440 aa9.77□□□□□ -0.85
SMC4-227ENST00000497984 RNF20Q5VTR2 975 aa9.77□□□□□ -0.85
SMC4-227ENST00000497984 NDUFB9Q9Y6M9 179 aa9.77□□□□□ -0.85
SMC4-227ENST00000497984 MEN1O00255 615 aa9.76□□□□□ -0.85
SMC4-227ENST00000497984 TRAK2O60296 914 aa9.75□□□□□ -0.85
SMC4-227ENST00000497984 GAS6Q14393 721 aa9.75□□□□□ -0.85
SMC4-227ENST00000497984 OSBPL3Q9H4L5 887 aa9.75□□□□□ -0.85
SMC4-227ENST00000497984 ARHGEF15O94989 841 aa9.74□□□□□ -0.85
SMC4-227ENST00000497984 ZNF592Q92610 1267 aa9.74□□□□□ -0.85
SMC4-227ENST00000497984 ZNF837Q96EG3 531 aaPredicted RBP9.74□□□□□ -0.85
SMC4-227ENST00000497984 PCDHB11Q9Y5F2 797 aa9.74□□□□□ -0.85
SMC4-227ENST00000497984 CLN3Q13286 438 aa9.73□□□□□ -0.85
SMC4-227ENST00000497984 CYP2U1Q7Z449 544 aa9.73□□□□□ -0.85
SMC4-227ENST00000497984 SVOPQ8N4V2 548 aa9.73□□□□□ -0.85
SMC4-227ENST00000497984 ZNF330Q9Y3S2 320 aaPredicted RBP9.73□□□□□ -0.85
SMC4-227ENST00000497984 ADAMTS2O95450 1211 aa9.72□□□□□ -0.85
SMC4-227ENST00000497984 GRIP2Q9C0E4 1043 aa9.72□□□□□ -0.85
SMC4-227ENST00000497984 TRIM22Q8IYM9 498 aa9.71□□□□□ -0.86
SMC4-227ENST00000497984 SRSF11Q05519 484 aaKnown RBP9.7□□□□□ -0.86
SMC4-227ENST00000497984 POU4F2Q12837 409 aa9.7□□□□□ -0.86
SMC4-227ENST00000497984 DBN1Q16643 649 aa9.7□□□□□ -0.86
SMC4-227ENST00000497984 GMCL1Q96IK5 515 aa9.7□□□□□ -0.86
SMC4-227ENST00000497984 NLRP3Q96P20 1036 aa9.7□□□□□ -0.86
SMC4-227ENST00000497984 ARHGEF10LQ9HCE6 1279 aa9.7□□□□□ -0.86
SMC4-227ENST00000497984 DYRK1BQ9Y463 629 aa9.7□□□□□ -0.86
SMC4-227ENST00000497984 SPATA31C2B4DYI2 1134 aa9.69□□□□□ -0.86
SMC4-227ENST00000497984 APBB1O00213 710 aa9.69□□□□□ -0.86
SMC4-227ENST00000497984 RASSF7Q02833 373 aa9.69□□□□□ -0.86
SMC4-227ENST00000497984 SLC27A3Q5K4L6 730 aa9.69□□□□□ -0.86
SMC4-227ENST00000497984 LYPD4Q6UWN0 246 aa9.69□□□□□ -0.86
SMC4-227ENST00000497984 CCDC85AQ96PX6 553 aaPredicted RBP9.69□□□□□ -0.86
SMC4-227ENST00000497984 CEP126Q9P2H0 1117 aa9.69□□□□□ -0.86
SMC4-227ENST00000497984 TPRNQ4KMQ1 711 aa9.68□□□□□ -0.86
SMC4-227ENST00000497984 NBPF10Q6P3W6 841 aaKnown RBP9.68□□□□□ -0.86
SMC4-227ENST00000497984 NBPF15Q8N660 670 aa9.68□□□□□ -0.86
SMC4-227ENST00000497984 CDCA7Q9BWT1 371 aaPredicted RBP9.68□□□□□ -0.86
SMC4-227ENST00000497984 RNF225M0QZC1 329 aaPredicted RBP9.67□□□□□ -0.86
SMC4-227ENST00000497984 GPR25O00155 361 aa9.67□□□□□ -0.86
SMC4-227ENST00000497984 WDR44Q5JSH3 913 aa9.67□□□□□ -0.86
SMC4-227ENST00000497984 RAB6BQ9NRW1 208 aa9.67□□□□□ -0.86
SMC4-227ENST00000497984 TBC1D2BQ9UPU7 963 aa9.67□□□□□ -0.86
SMC4-227ENST00000497984 RIPOR1Q6ZS17 1223 aa9.66□□□□□ -0.86
SMC4-227ENST00000497984 TMEM151AQ8N4L1 468 aa9.66□□□□□ -0.86
SMC4-227ENST00000497984 GDF11O95390 407 aa9.65□□□□□ -0.86
SMC4-227ENST00000497984 GNRH1P01148 92 aa9.65□□□□□ -0.86
SMC4-227ENST00000497984 IL2RAP01589 272 aa9.65□□□□□ -0.86
SMC4-227ENST00000497984 CELA2BP08218 269 aaPredicted RBP9.65□□□□□ -0.86
SMC4-227ENST00000497984 IRF5Q13568 498 aa9.65□□□□□ -0.86
SMC4-227ENST00000497984 GAS2L1Q99501 681 aaPredicted RBP9.65□□□□□ -0.86
SMC4-227ENST00000497984 ESYT1Q9BSJ8 1104 aa9.65□□□□□ -0.86
SMC4-227ENST00000497984 MBIPQ9NS73 344 aa9.65□□□□□ -0.86
SMC4-227ENST00000497984 HRH3Q9Y5N1 445 aa9.65□□□□□ -0.86
SMC4-227ENST00000497984 CNKSR1Q969H4 720 aa9.64□□□□□ -0.87
SMC4-227ENST00000497984 GTPBP3Q969Y2 492 aaKnown RBP9.64□□□□□ -0.87
SMC4-227ENST00000497984 H7C1W4 665 aa9.63□□□□□ -0.87
SMC4-227ENST00000497984 WASLO00401 505 aaPredicted RBP9.63□□□□□ -0.87
SMC4-227ENST00000497984 CENPCQ03188 943 aa9.63□□□□□ -0.87
SMC4-227ENST00000497984 XP32Q5T750 250 aa9.63□□□□□ -0.87
SMC4-227ENST00000497984 TAS1R3Q7RTX0 852 aa9.63□□□□□ -0.87
SMC4-227ENST00000497984 PHTF2Q8N3S3 785 aa9.63□□□□□ -0.87
SMC4-227ENST00000497984 TSGA10IPQ3SY00 556 aa9.62□□□□□ -0.87
SMC4-227ENST00000497984 ESF1Q9H501 851 aaKnown RBP9.62□□□□□ -0.87
SMC4-227ENST00000497984 TIMMDC1Q9NPL8 285 aa9.62□□□□□ -0.87
SMC4-227ENST00000497984 IGF1RP08069 1367 aa9.62□□□□□ -0.87
SMC4-227ENST00000497984 MYCP01106 439 aaPredicted RBP9.61□□□□□ -0.87
SMC4-227ENST00000497984 THBS1P07996 1170 aa9.61□□□□□ -0.87
SMC4-227ENST00000497984 FOXR1Q6PIV2 292 aa9.61□□□□□ -0.87
SMC4-227ENST00000497984 XAGE2Q96GT9 111 aa9.61□□□□□ -0.87
SMC4-227ENST00000497984 FHDC1Q9C0D6 1143 aaPredicted RBP9.61□□□□□ -0.87
SMC4-227ENST00000497984 F11P03951 625 aa9.6□□□□□ -0.87
SMC4-227ENST00000497984 IRS1P35568 1242 aa9.6□□□□□ -0.87
SMC4-227ENST00000497984 MARSP56192 900 aaKnown RBP9.6□□□□□ -0.87
SMC4-227ENST00000497984 MAP3K10Q02779 954 aa9.6□□□□□ -0.87
SMC4-227ENST00000497984 CHIC2Q9UKJ5 165 aa9.6□□□□□ -0.87
SMC4-227ENST00000497984 EIF4G2P78344 907 aaKnown RBP eCLIP9.59□□□□□ -0.87
SMC4-227ENST00000497984 KRTAP4-8Q9BYQ9 185 aa9.59□□□□□ -0.87
SMC4-227ENST00000497984 NUCKS1Q9H1E3 243 aaKnown RBP9.59□□□□□ -0.87
SMC4-227ENST00000497984 ACDQ96AP0 544 aa9.58□□□□□ -0.88
SMC4-227ENST00000497984 SCARF2Q96GP6 870 aaPredicted RBP9.58□□□□□ -0.88
SMC4-227ENST00000497984 TRERF1Q96PN7 1200 aa9.58□□□□□ -0.88
SMC4-227ENST00000497984 ZSCAN10Q96SZ4 725 aaPredicted RBP9.58□□□□□ -0.88
SMC4-227ENST00000497984 DOLKQ9UPQ8 538 aa9.57□□□□□ -0.88
SMC4-227ENST00000497984 STAU1O95793 577 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms