RNA–Protein interactions for RNA: ENST00000497483.1

HDAC10-219, Transcript of histone deacetylase 10, human

TSL 2

Gene HDAC10, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-219	ENST00000497483	TXNRD1	Q16881	649 aa		34.26	■■■■□ 3.08
HDAC10-219	ENST00000497483	ANO8	Q9HCE9	1232 aa	Predicted RBP	34.26	■■■■□ 3.08
HDAC10-219	ENST00000497483	EMILIN1	Q9Y6C2	1016 aa		34.26	■■■■□ 3.08
HDAC10-219	ENST00000497483	NCAPD2	Q15021	1401 aa		34.25	■■■■□ 3.07
HDAC10-219	ENST00000497483	DDX54	Q8TDD1	881 aa	Known RBP	34.23	■■■■□ 3.07
HDAC10-219	ENST00000497483	PKD1L3	Q7Z443	1732 aa		34.23	■■■■□ 3.07
HDAC10-219	ENST00000497483	ZCRB1	Q8TBF4	217 aa	Known RBP	34.22	■■■■□ 3.07
HDAC10-219	ENST00000497483	USHBP1	Q8N6Y0	703 aa		34.21	■■■■□ 3.07
HDAC10-219	ENST00000497483	NSD2	O96028	1365 aa		34.21	■■■■□ 3.07
HDAC10-219	ENST00000497483	RAPGEF4	Q8WZA2	1011 aa		34.2	■■■■□ 3.07
HDAC10-219	ENST00000497483	WASHC2A	Q641Q2	1341 aa		34.19	■■■■□ 3.06
HDAC10-219	ENST00000497483	LY75	O60449	1722 aa		34.18	■■■■□ 3.06
HDAC10-219	ENST00000497483	PANK3	Q9H999	370 aa		34.17	■■■■□ 3.06
HDAC10-219	ENST00000497483	TAT	P17735	454 aa	Predicted RBP	34.15	■■■■□ 3.06
HDAC10-219	ENST00000497483	POLK	Q9UBT6	870 aa		34.14	■■■■□ 3.06
HDAC10-219	ENST00000497483	STK32B	Q9NY57	414 aa		34.13	■■■■□ 3.05
HDAC10-219	ENST00000497483	PCDH11X	Q9BZA7	1347 aa		34.12	■■■■□ 3.05
HDAC10-219	ENST00000497483	PCDH11Y	Q9BZA8	1340 aa		34.12	■■■■□ 3.05
HDAC10-219	ENST00000497483	PPM1G	O15355	546 aa	Predicted RBP	34.12	■■■■□ 3.05
HDAC10-219	ENST00000497483	QSER1	Q2KHR3	1735 aa		34.12	■■■■□ 3.05
HDAC10-219	ENST00000497483	SLC15A2	Q16348	729 aa		34.11	■■■■□ 3.05
HDAC10-219	ENST00000497483	SPON1	Q9HCB6	807 aa		34.11	■■■■□ 3.05
HDAC10-219	ENST00000497483	TOGARAM1	Q9Y4F4	1720 aa		34.09	■■■■□ 3.05
HDAC10-219	ENST00000497483	PRIM1	P49642	420 aa	Known RBP	34.07	■■■■□ 3.04
HDAC10-219	ENST00000497483	SLC27A3	Q5K4L6	730 aa		34.06	■■■■□ 3.04
HDAC10-219	ENST00000497483	SYTL4	Q96C24	671 aa	Predicted RBP	34.06	■■■■□ 3.04
HDAC10-219	ENST00000497483	KIF7	Q2M1P5	1343 aa		34.05	■■■■□ 3.04
HDAC10-219	ENST00000497483	ITGB4	P16144	1822 aa		34.05	■■■■□ 3.04
HDAC10-219	ENST00000497483	PLEKHG2	Q9H7P9	1386 aa		34.05	■■■■□ 3.04
HDAC10-219	ENST00000497483	EYA1	Q99502	592 aa		34.04	■■■■□ 3.04
HDAC10-219	ENST00000497483	LRRC4B	Q9NT99	713 aa		34.04	■■■■□ 3.04
HDAC10-219	ENST00000497483	PDGFD	Q9GZP0	370 aa	Predicted RBP	34.03	■■■■□ 3.04
HDAC10-219	ENST00000497483	TUBGCP6	Q96RT7	1819 aa		34.02	■■■■□ 3.04
HDAC10-219	ENST00000497483	TNNT2	P45379	298 aa	Predicted RBP	34.02	■■■■□ 3.04
HDAC10-219	ENST00000497483	CYP27B1	O15528	508 aa		34	■■■■□ 3.03
HDAC10-219	ENST00000497483	EIF4A2	Q14240	407 aa	Known RBP	34	■■■■□ 3.03
HDAC10-219	ENST00000497483	KNSTRN	Q9Y448	316 aa		34	■■■■□ 3.03
HDAC10-219	ENST00000497483	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.98	■■■■□ 3.03
HDAC10-219	ENST00000497483	ZNF827	Q17R98	1081 aa		33.97	■■■■□ 3.03
HDAC10-219	ENST00000497483	PPP1R1B	Q9UD71	204 aa	Predicted RBP	33.96	■■■■□ 3.03
HDAC10-219	ENST00000497483	IGSF1	Q8N6C5	1336 aa		33.96	■■■■□ 3.03
HDAC10-219	ENST00000497483	MORC1	Q86VD1	984 aa		33.95	■■■■□ 3.03
HDAC10-219	ENST00000497483	AKT1S1	Q96B36	256 aa		33.95	■■■■□ 3.03
HDAC10-219	ENST00000497483	SPG7	Q9UQ90	795 aa		33.95	■■■■□ 3.03
HDAC10-219	ENST00000497483	C5	P01031	1676 aa		33.94	■■■■□ 3.02
HDAC10-219	ENST00000497483	ZBTB7A	O95365	584 aa		33.94	■■■■□ 3.02
HDAC10-219	ENST00000497483	TAF1L	Q8IZX4	1826 aa		33.93	■■■■□ 3.02
HDAC10-219	ENST00000497483	NKX1-1	Q15270	411 aa	Predicted RBP	33.93	■■■■□ 3.02
HDAC10-219	ENST00000497483	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.93	■■■■□ 3.02
HDAC10-219	ENST00000497483	COL24A1	Q17RW2	1714 aa		33.93	■■■■□ 3.02
HDAC10-219	ENST00000497483	MTFR1L	Q9H019	292 aa		33.92	■■■■□ 3.02
HDAC10-219	ENST00000497483	PTGER2	P43116	358 aa		33.91	■■■■□ 3.02
HDAC10-219	ENST00000497483	CCNL1	Q9UK58	526 aa	Predicted RBP	33.89	■■■■□ 3.02
HDAC10-219	ENST00000497483	PALLD	Q8WX93	1383 aa		33.86	■■■■□ 3.01
HDAC10-219	ENST00000497483	SGIP1	Q9BQI5	828 aa		33.86	■■■■□ 3.01
HDAC10-219	ENST00000497483	KCNQ4	P56696	695 aa		33.85	■■■■□ 3.01
HDAC10-219	ENST00000497483	ATF5	Q9Y2D1	282 aa	Predicted RBP	33.85	■■■■□ 3.01
HDAC10-219	ENST00000497483	PER1	O15534	1290 aa	Predicted RBP	33.84	■■■■□ 3.01
HDAC10-219	ENST00000497483	MPRIP	Q6WCQ1	1025 aa		33.84	■■■■□ 3.01
HDAC10-219	ENST00000497483	PNPLA7	Q6ZV29	1317 aa		33.83	■■■■□ 3.01
HDAC10-219	ENST00000497483	PHKG2	P15735	406 aa		33.83	■■■■□ 3.01
HDAC10-219	ENST00000497483	IFNL2	Q8IZJ0	200 aa		33.83	■■■■□ 3.01
HDAC10-219	ENST00000497483	SLC16A10	Q8TF71	515 aa		33.82	■■■■□ 3
HDAC10-219	ENST00000497483	HMGB2	P26583	209 aa	Known RBP	33.81	■■■■□ 3
HDAC10-219	ENST00000497483	SMARCC1	Q92922	1105 aa	Predicted RBP	33.8	■■■■□ 3
HDAC10-219	ENST00000497483	TFCP2L1	Q9NZI6	479 aa		33.8	■■■■□ 3
HDAC10-219	ENST00000497483	NPC1L1	Q9UHC9	1359 aa		33.8	■■■■□ 3
HDAC10-219	ENST00000497483	C4B	P0C0L5	1744 aa		33.79	■■■■□ 3
HDAC10-219	ENST00000497483	KDR	P35968	1356 aa		33.79	■■■■□ 3
HDAC10-219	ENST00000497483	PIGB	Q92521	554 aa		33.78	■■■■□ 3
HDAC10-219	ENST00000497483	IL13	P35225	146 aa		33.74	■■■□□ 2.99
HDAC10-219	ENST00000497483	TMOD3	Q9NYL9	352 aa		33.74	■■■□□ 2.99
HDAC10-219	ENST00000497483	ZNF831	Q5JPB2	1677 aa		33.74	■■■□□ 2.99
HDAC10-219	ENST00000497483	UBR3	Q6ZT12	1888 aa		33.73	■■■□□ 2.99
HDAC10-219	ENST00000497483	MAP3K5	Q99683	1374 aa		33.73	■■■□□ 2.99
HDAC10-219	ENST00000497483	AMOT	Q4VCS5	1084 aa		33.73	■■■□□ 2.99
HDAC10-219	ENST00000497483	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.73	■■■□□ 2.99
HDAC10-219	ENST00000497483	AEBP1	Q8IUX7	1158 aa		33.72	■■■□□ 2.99
HDAC10-219	ENST00000497483	HSP90AB1	P08238	724 aa	Known RBP	33.71	■■■□□ 2.99
HDAC10-219	ENST00000497483	ARX	Q96QS3	562 aa		33.7	■■■□□ 2.99
HDAC10-219	ENST00000497483	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.7	■■■□□ 2.99
HDAC10-219	ENST00000497483	KDM6A	O15550	1401 aa	Predicted RBP	33.7	■■■□□ 2.98
HDAC10-219	ENST00000497483	MTHFS	P49914	203 aa		33.69	■■■□□ 2.98
HDAC10-219	ENST00000497483	SCN11A	Q9UI33	1791 aa		33.68	■■■□□ 2.98
HDAC10-219	ENST00000497483	CC2D1B	Q5T0F9	858 aa	Known RBP	33.68	■■■□□ 2.98
HDAC10-219	ENST00000497483	SULT6B1	Q6IMI4	303 aa		33.68	■■■□□ 2.98
HDAC10-219	ENST00000497483	DCAF5	Q96JK2	942 aa		33.68	■■■□□ 2.98
HDAC10-219	ENST00000497483	ERVV-2	B6SEH9	535 aa		33.67	■■■□□ 2.98
HDAC10-219	ENST00000497483	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.67	■■■□□ 2.98
HDAC10-219	ENST00000497483	SYT17	Q9BSW7	474 aa		33.66	■■■□□ 2.98
HDAC10-219	ENST00000497483	LOC102724428	A0A0B4J2F2	783 aa		33.65	■■■□□ 2.98
HDAC10-219	ENST00000497483	SIK1	P57059	783 aa		33.65	■■■□□ 2.98
HDAC10-219	ENST00000497483	VIRMA	Q69YN4	1812 aa	Known RBP	33.65	■■■□□ 2.98
HDAC10-219	ENST00000497483	COL3A1	P02461	1466 aa	Predicted RBP	33.64	■■■□□ 2.98
HDAC10-219	ENST00000497483	DCAF8L1	A6NGE4	600 aa		33.64	■■■□□ 2.98
HDAC10-219	ENST00000497483	POLD1	P28340	1107 aa		33.64	■■■□□ 2.98
HDAC10-219	ENST00000497483	COL23A1	Q86Y22	540 aa	Predicted RBP	33.64	■■■□□ 2.98
HDAC10-219	ENST00000497483	FLAD1	Q8NFF5	587 aa		33.64	■■■□□ 2.98
HDAC10-219	ENST00000497483	ASAP1	Q9ULH1	1129 aa		33.64	■■■□□ 2.98
HDAC10-219	ENST00000497483	ATG3	Q9NT62	314 aa		33.62	■■■□□ 2.97

Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms