RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 SPATA31A1Q5TZJ5 1347 aa13.8□□□□□ -0.2
USP13-205ENST00000497380 SPATA31A5Q5VU36 1347 aa13.8□□□□□ -0.2
USP13-205ENST00000497380 SPATA31A7Q8IWB4 1347 aa13.8□□□□□ -0.2
USP13-205ENST00000497380 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.79□□□□□ -0.2
USP13-205ENST00000497380 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
USP13-205ENST00000497380 USP35Q9P2H5 1018 aa13.79□□□□□ -0.2
USP13-205ENST00000497380 NRAPQ86VF7 1730 aa13.78□□□□□ -0.2
USP13-205ENST00000497380 APAF1O14727 1248 aa13.78□□□□□ -0.2
USP13-205ENST00000497380 LMOD3Q0VAK6 560 aa13.78□□□□□ -0.2
USP13-205ENST00000497380 NFE2L2Q16236 605 aa13.78□□□□□ -0.2
USP13-205ENST00000497380 BARGINQ6ZT62 677 aa13.78□□□□□ -0.2
USP13-205ENST00000497380 RGPD2P0DJD1 1756 aa13.78□□□□□ -0.2
USP13-205ENST00000497380 TMPOP42166 694 aaKnown RBP13.77□□□□□ -0.21
USP13-205ENST00000497380 GJD4Q96KN9 370 aaPredicted RBP13.77□□□□□ -0.21
USP13-205ENST00000497380 PHACTR3Q96KR7 559 aa13.77□□□□□ -0.21
USP13-205ENST00000497380 QTRT2Q9H974 415 aaKnown RBP13.77□□□□□ -0.21
USP13-205ENST00000497380 RIPK4P57078 832 aa13.76□□□□□ -0.21
USP13-205ENST00000497380 CCDC27Q2M243 656 aa13.76□□□□□ -0.21
USP13-205ENST00000497380 C1orf141Q5JVX7 400 aa13.76□□□□□ -0.21
USP13-205ENST00000497380 RTF1Q92541 710 aaKnown RBP13.76□□□□□ -0.21
USP13-205ENST00000497380 EXOC5O00471 708 aa13.75□□□□□ -0.21
USP13-205ENST00000497380 HTATSF1O43719 755 aaKnown RBP13.75□□□□□ -0.21
USP13-205ENST00000497380 ZCRB1Q8TBF4 217 aaKnown RBP13.75□□□□□ -0.21
USP13-205ENST00000497380 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
USP13-205ENST00000497380 RGS12O14924 1447 aa13.74□□□□□ -0.21
USP13-205ENST00000497380 ATRNO75882 1429 aa13.74□□□□□ -0.21
USP13-205ENST00000497380 GNAT3A8MTJ3 354 aa13.74□□□□□ -0.21
USP13-205ENST00000497380 HSP90AB1P08238 724 aaKnown RBP13.74□□□□□ -0.21
USP13-205ENST00000497380 CALD1Q05682 793 aaKnown RBP13.74□□□□□ -0.21
USP13-205ENST00000497380 NEUROD2Q15784 382 aa13.74□□□□□ -0.21
USP13-205ENST00000497380 MTHFSDQ2M296 383 aaKnown RBP13.74□□□□□ -0.21
USP13-205ENST00000497380 AKAP4Q5JQC9 854 aa13.74□□□□□ -0.21
USP13-205ENST00000497380 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
USP13-205ENST00000497380 PARP4Q9UKK3 1724 aaKnown RBP13.73□□□□□ -0.21
USP13-205ENST00000497380 PCDH11XQ9BZA7 1347 aa13.73□□□□□ -0.21
USP13-205ENST00000497380 PCDH11YQ9BZA8 1340 aa13.73□□□□□ -0.21
USP13-205ENST00000497380 ZNF530Q6P9A1 599 aaPredicted RBP13.73□□□□□ -0.21
USP13-205ENST00000497380 IFNL2Q8IZJ0 200 aa13.73□□□□□ -0.21
USP13-205ENST00000497380 ZBED9Q6R2W3 1325 aa13.72□□□□□ -0.21
USP13-205ENST00000497380 RBM6P78332 1123 aaKnown RBP13.72□□□□□ -0.21
USP13-205ENST00000497380 DDB1Q16531 1140 aa13.72□□□□□ -0.21
USP13-205ENST00000497380 RRP7AQ9Y3A4 280 aaKnown RBP13.72□□□□□ -0.21
USP13-205ENST00000497380 MEGF6O75095 1541 aa13.72□□□□□ -0.21
USP13-205ENST00000497380 DISP2A7MBM2 1401 aa13.72□□□□□ -0.21
USP13-205ENST00000497380 A0A0G2JS52 829 aa13.71□□□□□ -0.21
USP13-205ENST00000497380 ONECUT3O60422 494 aaPredicted RBP13.71□□□□□ -0.21
USP13-205ENST00000497380 MYT1Q01538 1121 aa13.71□□□□□ -0.21
USP13-205ENST00000497380 PDE3BQ13370 1112 aa13.71□□□□□ -0.21
USP13-205ENST00000497380 FAM98CQ17RN3 349 aaKnown RBP13.71□□□□□ -0.21
USP13-205ENST00000497380 WDR63Q8IWG1 891 aa13.71□□□□□ -0.21
USP13-205ENST00000497380 SALL2Q9Y467 1007 aaPredicted RBP13.71□□□□□ -0.21
USP13-205ENST00000497380 MAP3K5Q99683 1374 aa13.71□□□□□ -0.22
USP13-205ENST00000497380 WWC1Q8IX03 1113 aa13.7□□□□□ -0.22
USP13-205ENST00000497380 PHKG2P15735 406 aa13.69□□□□□ -0.22
USP13-205ENST00000497380 DDX54Q8TDD1 881 aaKnown RBP13.69□□□□□ -0.22
USP13-205ENST00000497380 DCAF5Q96JK2 942 aa13.69□□□□□ -0.22
USP13-205ENST00000497380 PKD1L3Q7Z443 1732 aa13.68□□□□□ -0.22
USP13-205ENST00000497380 GOLGA2Q08379 1002 aa13.68□□□□□ -0.22
USP13-205ENST00000497380 TRIM35Q9UPQ4 493 aa13.68□□□□□ -0.22
USP13-205ENST00000497380 IL16Q14005 1332 aa13.67□□□□□ -0.22
USP13-205ENST00000497380 TNS2Q63HR2 1409 aa13.67□□□□□ -0.22
USP13-205ENST00000497380 CYP27B1O15528 508 aa13.67□□□□□ -0.22
USP13-205ENST00000497380 NKX1-1Q15270 411 aaPredicted RBP13.67□□□□□ -0.22
USP13-205ENST00000497380 GLI3P10071 1580 aa13.66□□□□□ -0.22
USP13-205ENST00000497380 TEFQ10587 303 aa13.66□□□□□ -0.22
USP13-205ENST00000497380 SEPT12Q8IYM1 358 aa13.66□□□□□ -0.22
USP13-205ENST00000497380 WNK3Q9BYP7 1800 aa13.66□□□□□ -0.22
USP13-205ENST00000497380 ZNF521Q96K83 1311 aa13.65□□□□□ -0.22
USP13-205ENST00000497380 SENP3-EIF4A1A0A087X0R7 540 aa13.65□□□□□ -0.22
USP13-205ENST00000497380 E9PSI1 815 aa13.65□□□□□ -0.22
USP13-205ENST00000497380 RNMTO43148 476 aaKnown RBP13.65□□□□□ -0.22
USP13-205ENST00000497380 GNAI1P63096 354 aa13.65□□□□□ -0.22
USP13-205ENST00000497380 MPRIPQ6WCQ1 1025 aa13.65□□□□□ -0.22
USP13-205ENST00000497380 MYH16Q9H6N6 1097 aa13.65□□□□□ -0.22
USP13-205ENST00000497380 BABAM1Q9NWV8 329 aa13.65□□□□□ -0.22
USP13-205ENST00000497380 ERVV-2B6SEH9 535 aa13.64□□□□□ -0.23
USP13-205ENST00000497380 TAF7Q15545 349 aaPredicted RBP13.64□□□□□ -0.23
USP13-205ENST00000497380 MCM10Q7L590 875 aa13.64□□□□□ -0.23
USP13-205ENST00000497380 IL17REQ8NFR9 667 aa13.64□□□□□ -0.23
USP13-205ENST00000497380 DLG5Q8TDM6 1919 aa13.64□□□□□ -0.23
USP13-205ENST00000497380 CEMIPQ8WUJ3 1361 aa13.63□□□□□ -0.23
USP13-205ENST00000497380 DCTN1Q14203 1278 aa13.63□□□□□ -0.23
USP13-205ENST00000497380 CFAP44Q96MT7 982 aa13.63□□□□□ -0.23
USP13-205ENST00000497380 LGR6Q9HBX8 967 aa13.63□□□□□ -0.23
USP13-205ENST00000497380 IFT57Q9NWB7 429 aa13.63□□□□□ -0.23
USP13-205ENST00000497380 THSD7AQ9UPZ6 1657 aa13.63□□□□□ -0.23
USP13-205ENST00000497380 CABP4P57796 275 aa13.62□□□□□ -0.23
USP13-205ENST00000497380 LRRC37A3O60309 1634 aa13.61□□□□□ -0.23
USP13-205ENST00000497380 SLFN5Q08AF3 891 aa13.61□□□□□ -0.23
USP13-205ENST00000497380 KRT27Q7Z3Y8 459 aa13.61□□□□□ -0.23
USP13-205ENST00000497380 CCDC125Q86Z20 511 aa13.61□□□□□ -0.23
USP13-205ENST00000497380 MARCH10Q8NA82 808 aaPredicted RBP13.61□□□□□ -0.23
USP13-205ENST00000497380 SLC52A2Q9HAB3 445 aa13.61□□□□□ -0.23
USP13-205ENST00000497380 LAS1LQ9Y4W2 734 aaKnown RBP13.61□□□□□ -0.23
USP13-205ENST00000497380 EP400Q96L91 3159 aa13.61□□□□□ -0.23
USP13-205ENST00000497380 CENPBP07199 599 aaPredicted RBP13.6□□□□□ -0.23
USP13-205ENST00000497380 THUMPD2Q9BTF0 503 aaKnown RBP13.6□□□□□ -0.23
USP13-205ENST00000497380 BTBD11A6QL63 1104 aa13.59□□□□□ -0.23
USP13-205ENST00000497380 CHL1O00533 1208 aa13.59□□□□□ -0.23
USP13-205ENST00000497380 NFATC2IPQ8NCF5 419 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms