RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 ARMC2Q8NEN0 867 aa7.08□□□□□ -1.28
CMSS1-209ENST00000497345 HELBQ8NG08 1087 aaPredicted RBP7.08□□□□□ -1.28
CMSS1-209ENST00000497345 CDK15Q96Q40 435 aa7.08□□□□□ -1.28
CMSS1-209ENST00000497345 ADCY10Q96PN6 1610 aa7.08□□□□□ -1.28
CMSS1-209ENST00000497345 ADH1CP00326 375 aa7.07□□□□□ -1.28
CMSS1-209ENST00000497345 ARID5BQ14865 1188 aa7.07□□□□□ -1.28
CMSS1-209ENST00000497345 C4orf48Q5BLP8 95 aa7.07□□□□□ -1.28
CMSS1-209ENST00000497345 BCANQ96GW7 911 aa7.07□□□□□ -1.28
CMSS1-209ENST00000497345 RRP7BPQ9NSQ0 103 aa7.07□□□□□ -1.28
CMSS1-209ENST00000497345 RIMBP3CA6NJZ7 1639 aa7.06□□□□□ -1.28
CMSS1-209ENST00000497345 RIMBP3BA6NNM3 1639 aa7.06□□□□□ -1.28
CMSS1-209ENST00000497345 PTPN23Q9H3S7 1636 aa7.06□□□□□ -1.28
CMSS1-209ENST00000497345 RIMBP3Q9UFD9 1639 aa7.06□□□□□ -1.28
CMSS1-209ENST00000497345 SKIV2LQ15477 1246 aaKnown RBP7.06□□□□□ -1.28
CMSS1-209ENST00000497345 KLF16Q9BXK1 252 aaPredicted RBP7.06□□□□□ -1.28
CMSS1-209ENST00000497345 UHRF1BP1LA0JNW5 1464 aa7.05□□□□□ -1.28
CMSS1-209ENST00000497345 TIMP2P16035 220 aa7.05□□□□□ -1.28
CMSS1-209ENST00000497345 WDR4P57081 412 aaKnown RBP7.05□□□□□ -1.28
CMSS1-209ENST00000497345 CTDSPL2Q05D32 466 aa7.05□□□□□ -1.28
CMSS1-209ENST00000497345 NR5A1Q13285 461 aa7.05□□□□□ -1.28
CMSS1-209ENST00000497345 ZFP42Q96MM3 310 aa7.05□□□□□ -1.28
CMSS1-209ENST00000497345 KDM4CQ9H3R0 1056 aa7.05□□□□□ -1.28
CMSS1-209ENST00000497345 GPATCH8Q9UKJ3 1502 aaKnown RBP7.05□□□□□ -1.28
CMSS1-209ENST00000497345 GRM5P41594 1212 aa7.04□□□□□ -1.28
CMSS1-209ENST00000497345 HNRNPMP52272 730 aaKnown RBP eCLIP7.04□□□□□ -1.28
CMSS1-209ENST00000497345 SH3RF1Q7Z6J0 888 aa7.04□□□□□ -1.28
CMSS1-209ENST00000497345 GPBP1L1Q9HC44 474 aaPredicted RBP7.04□□□□□ -1.28
CMSS1-209ENST00000497345 PTPRKQ15262 1439 aa7.03□□□□□ -1.28
CMSS1-209ENST00000497345 ASXL2Q76L83 1435 aa7.03□□□□□ -1.28
CMSS1-209ENST00000497345 KDM5BQ9UGL1 1544 aa7.03□□□□□ -1.28
CMSS1-209ENST00000497345 NBPF14Q5TI25 921 aa7.03□□□□□ -1.28
CMSS1-209ENST00000497345 MRPL14Q6P1L8 145 aaKnown RBP7.03□□□□□ -1.28
CMSS1-209ENST00000497345 FAM117AQ9C073 453 aa7.03□□□□□ -1.28
CMSS1-209ENST00000497345 ABCC10Q5T3U5 1492 aa7.03□□□□□ -1.28
CMSS1-209ENST00000497345 TTC37Q6PGP7 1564 aa7.03□□□□□ -1.28
CMSS1-209ENST00000497345 ARHGAP5Q13017 1502 aa7.02□□□□□ -1.29
CMSS1-209ENST00000497345 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.02□□□□□ -1.29
CMSS1-209ENST00000497345 CDC42BPAQ5VT25 1732 aa7.02□□□□□ -1.29
CMSS1-209ENST00000497345 WIPF1O43516 503 aa7.02□□□□□ -1.29
CMSS1-209ENST00000497345 NR3C2P08235 984 aa7.02□□□□□ -1.29
CMSS1-209ENST00000497345 SH3D19Q5HYK7 790 aa7.02□□□□□ -1.29
CMSS1-209ENST00000497345 LCE2CQ5TA81 110 aa7.02□□□□□ -1.29
CMSS1-209ENST00000497345 SH3BP5LQ7L8J4 393 aa7.02□□□□□ -1.29
CMSS1-209ENST00000497345 PROCA1Q8NCQ7 364 aaPredicted RBP7.02□□□□□ -1.29
CMSS1-209ENST00000497345 DDRGK1Q96HY6 314 aa7.02□□□□□ -1.29
CMSS1-209ENST00000497345 C1QTNF2Q9BXJ5 285 aa7.02□□□□□ -1.29
CMSS1-209ENST00000497345 NXF1Q9UBU9 619 aaKnown RBP7.02□□□□□ -1.29
CMSS1-209ENST00000497345 CAMSAP2Q08AD1 1489 aa7.02□□□□□ -1.29
CMSS1-209ENST00000497345 ITSN2Q9NZM3 1697 aa7.02□□□□□ -1.29
CMSS1-209ENST00000497345 MIA2Q96PC5 1412 aa7.01□□□□□ -1.29
CMSS1-209ENST00000497345 WDR7Q9Y4E6 1490 aa7.01□□□□□ -1.29
CMSS1-209ENST00000497345 RAB3GAP2Q9H2M9 1393 aa7.01□□□□□ -1.29
CMSS1-209ENST00000497345 ZIC2O95409 532 aaPredicted RBP7.01□□□□□ -1.29
CMSS1-209ENST00000497345 SCARF1Q14162 830 aa7.01□□□□□ -1.29
CMSS1-209ENST00000497345 FBXO31Q5XUX0 539 aaPredicted RBP7.01□□□□□ -1.29
CMSS1-209ENST00000497345 SLC16A10Q8TF71 515 aa7.01□□□□□ -1.29
CMSS1-209ENST00000497345 GPKOWQ92917 476 aaPredicted RBP eCLIP7.01□□□□□ -1.29
CMSS1-209ENST00000497345 TRIM52Q96A61 297 aa7.01□□□□□ -1.29
CMSS1-209ENST00000497345 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.01□□□□□ -1.29
CMSS1-209ENST00000497345 ZFAND3Q9H8U3 227 aa7.01□□□□□ -1.29
CMSS1-209ENST00000497345 SETD5Q9C0A6 1442 aa7.01□□□□□ -1.29
CMSS1-209ENST00000497345 TCOF1Q13428 1488 aaKnown RBP7□□□□□ -1.29
CMSS1-209ENST00000497345 MAGEB6P1A0A0J9YX57 407 aa7□□□□□ -1.29
CMSS1-209ENST00000497345 PPP2R2DQ66LE6 453 aa7□□□□□ -1.29
CMSS1-209ENST00000497345 TRMT44Q8IYL2 757 aaKnown RBP7□□□□□ -1.29
CMSS1-209ENST00000497345 LRRN4Q8WUT4 740 aa7□□□□□ -1.29
CMSS1-209ENST00000497345 ITPKCQ96DU7 683 aa7□□□□□ -1.29
CMSS1-209ENST00000497345 PURBQ96QR8 312 aaKnown RBP7□□□□□ -1.29
CMSS1-209ENST00000497345 MAP4K5Q9Y4K4 846 aa7□□□□□ -1.29
CMSS1-209ENST00000497345 ABCC5O15440 1437 aa7□□□□□ -1.29
CMSS1-209ENST00000497345 DAPK1P53355 1430 aa7□□□□□ -1.29
CMSS1-209ENST00000497345 CDC42BPBQ9Y5S2 1711 aa6.99□□□□□ -1.29
CMSS1-209ENST00000497345 EFCAB2Q5VUJ9 269 aa6.99□□□□□ -1.29
CMSS1-209ENST00000497345 PDXDC2PQ6P474 469 aa6.99□□□□□ -1.29
CMSS1-209ENST00000497345 VASH1Q7L8A9 365 aaPredicted RBP6.99□□□□□ -1.29
CMSS1-209ENST00000497345 NPAS3Q8IXF0 933 aa6.99□□□□□ -1.29
CMSS1-209ENST00000497345 MYO5CQ9NQX4 1742 aa6.98□□□□□ -1.29
CMSS1-209ENST00000497345 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.98□□□□□ -1.29
CMSS1-209ENST00000497345 TSPY4P0CV99 314 aa6.98□□□□□ -1.29
CMSS1-209ENST00000497345 TSPY10P0CW01 314 aa6.98□□□□□ -1.29
CMSS1-209ENST00000497345 INSM1Q01101 510 aaPredicted RBP6.98□□□□□ -1.29
CMSS1-209ENST00000497345 FAM69CQ0P6D2 419 aa6.98□□□□□ -1.29
CMSS1-209ENST00000497345 FKBPLQ9UIM3 349 aa6.98□□□□□ -1.29
CMSS1-209ENST00000497345 PREX2Q70Z35 1606 aa6.98□□□□□ -1.29
CMSS1-209ENST00000497345 SLC24A1O60721 1099 aa6.97□□□□□ -1.29
CMSS1-209ENST00000497345 NEUROD1Q13562 356 aa6.97□□□□□ -1.29
CMSS1-209ENST00000497345 NR6A1Q15406 480 aa6.97□□□□□ -1.29
CMSS1-209ENST00000497345 ERFEQ4G0M1 354 aa6.97□□□□□ -1.29
CMSS1-209ENST00000497345 SAMD9LQ8IVG5 1584 aa6.97□□□□□ -1.29
CMSS1-209ENST00000497345 CARD14Q9BXL6 1004 aa6.97□□□□□ -1.29
CMSS1-209ENST00000497345 PLCH2O75038 1416 aa6.96□□□□□ -1.3
CMSS1-209ENST00000497345 AP1G2O75843 785 aa6.96□□□□□ -1.3
CMSS1-209ENST00000497345 FSHRP23945 695 aa6.96□□□□□ -1.3
CMSS1-209ENST00000497345 ZEB1P37275 1124 aaPredicted RBP6.96□□□□□ -1.3
CMSS1-209ENST00000497345 VEGFBP49765 207 aa6.96□□□□□ -1.3
CMSS1-209ENST00000497345 AFAP1Q8N556 730 aa6.96□□□□□ -1.3
CMSS1-209ENST00000497345 ARHGAP9Q9BRR9 750 aa6.96□□□□□ -1.3
CMSS1-209ENST00000497345 EMILIN1Q9Y6C2 1016 aa6.96□□□□□ -1.3
CMSS1-209ENST00000497345 DNMT1P26358 1616 aaKnown RBP6.96□□□□□ -1.3
CMSS1-209ENST00000497345 SYCP2Q9BX26 1530 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms