RNA–Protein interactions for RNA: ENST00000497316.5

COL1A2-212, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 962 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-212ENST00000497316 IGSF1Q8N6C5 1336 aa21.79■■□□□ 1.08
COL1A2-212ENST00000497316 SHANK3Q9BYB0 1731 aa21.78■■□□□ 1.08
COL1A2-212ENST00000497316 PARD3Q8TEW0 1356 aa21.78■■□□□ 1.08
COL1A2-212ENST00000497316 APBA3O96018 575 aa21.78■■□□□ 1.08
COL1A2-212ENST00000497316 DDX54Q8TDD1 881 aaKnown RBP21.77■■□□□ 1.08
COL1A2-212ENST00000497316 CAMKK2Q96RR4 588 aa21.76■■□□□ 1.07
COL1A2-212ENST00000497316 NHSQ6T4R5 1651 aa21.75■■□□□ 1.07
COL1A2-212ENST00000497316 PKD1L3Q7Z443 1732 aa21.75■■□□□ 1.07
COL1A2-212ENST00000497316 IL13P35225 146 aa21.75■■□□□ 1.07
COL1A2-212ENST00000497316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.75■■□□□ 1.07
COL1A2-212ENST00000497316 PLSCR1O15162 318 aa21.74■■□□□ 1.07
COL1A2-212ENST00000497316 PCDH11XQ9BZA7 1347 aa21.74■■□□□ 1.07
COL1A2-212ENST00000497316 PCDH11YQ9BZA8 1340 aa21.74■■□□□ 1.07
COL1A2-212ENST00000497316 RGPD3A6NKT7 1758 aaPredicted RBP21.74■■□□□ 1.07
COL1A2-212ENST00000497316 RGPD4Q7Z3J3 1758 aa21.74■■□□□ 1.07
COL1A2-212ENST00000497316 PSDA5PKW4 1024 aaPredicted RBP21.72■■□□□ 1.07
COL1A2-212ENST00000497316 EZH2Q15910 746 aaKnown RBP21.72■■□□□ 1.07
COL1A2-212ENST00000497316 PTF1AQ7RTS3 328 aa21.71■■□□□ 1.07
COL1A2-212ENST00000497316 SPG7Q9UQ90 795 aa21.71■■□□□ 1.07
COL1A2-212ENST00000497316 KCNQ2O43526 872 aa21.7■■□□□ 1.06
COL1A2-212ENST00000497316 CNGB1Q14028 1251 aaPredicted RBP21.7■■□□□ 1.06
COL1A2-212ENST00000497316 KDRP35968 1356 aa21.7■■□□□ 1.06
COL1A2-212ENST00000497316 RREB1Q92766 1687 aa21.69■■□□□ 1.06
COL1A2-212ENST00000497316 DIAPH1O60610 1272 aaKnown RBP21.69■■□□□ 1.06
COL1A2-212ENST00000497316 ACSBG1Q96GR2 724 aa21.69■■□□□ 1.06
COL1A2-212ENST00000497316 CYP27B1O15528 508 aa21.68■■□□□ 1.06
COL1A2-212ENST00000497316 COL3A1P02461 1466 aaPredicted RBP21.68■■□□□ 1.06
COL1A2-212ENST00000497316 PPP2R1AP30153 589 aa21.67■■□□□ 1.06
COL1A2-212ENST00000497316 DDX10Q13206 875 aaKnown RBP21.67■■□□□ 1.06
COL1A2-212ENST00000497316 R3HDM1Q15032 1099 aaKnown RBP21.67■■□□□ 1.06
COL1A2-212ENST00000497316 NKX1-1Q15270 411 aaPredicted RBP21.67■■□□□ 1.06
COL1A2-212ENST00000497316 DOT1LQ8TEK3 1739 aa21.66■■□□□ 1.06
COL1A2-212ENST00000497316 SULT6B1Q6IMI4 303 aa21.66■■□□□ 1.06
COL1A2-212ENST00000497316 KAT6BQ8WYB5 2073 aa21.65■■□□□ 1.06
COL1A2-212ENST00000497316 BTAF1O14981 1849 aa21.65■■□□□ 1.06
COL1A2-212ENST00000497316 AMOTQ4VCS5 1084 aa21.65■■□□□ 1.06
COL1A2-212ENST00000497316 NBPF14Q5TI25 921 aa21.65■■□□□ 1.06
COL1A2-212ENST00000497316 AEBP1Q8IUX7 1158 aa21.65■■□□□ 1.06
COL1A2-212ENST00000497316 CFAP53Q96M91 514 aa21.65■■□□□ 1.06
COL1A2-212ENST00000497316 LRP5O75197 1615 aa21.65■■□□□ 1.06
COL1A2-212ENST00000497316 PLEKHO1Q53GL0 409 aaPredicted RBP21.64■■□□□ 1.05
COL1A2-212ENST00000497316 IFNL2Q8IZJ0 200 aa21.64■■□□□ 1.05
COL1A2-212ENST00000497316 NUP188Q5SRE5 1749 aa21.63■■□□□ 1.05
COL1A2-212ENST00000497316 PRIM1P49642 420 aaKnown RBP21.63■■□□□ 1.05
COL1A2-212ENST00000497316 PHKG2P15735 406 aa21.62■■□□□ 1.05
COL1A2-212ENST00000497316 PROM2Q8N271 834 aa21.61■■□□□ 1.05
COL1A2-212ENST00000497316 RALBP1Q15311 655 aa21.6■■□□□ 1.05
COL1A2-212ENST00000497316 TXNRD1Q16881 649 aa21.6■■□□□ 1.05
COL1A2-212ENST00000497316 SYTL4Q96C24 671 aaPredicted RBP21.6■■□□□ 1.05
COL1A2-212ENST00000497316 TOGARAM1Q9Y4F4 1720 aa21.58■■□□□ 1.05
COL1A2-212ENST00000497316 HSP90AB1P08238 724 aaKnown RBP21.58■■□□□ 1.05
COL1A2-212ENST00000497316 HMOX1P09601 288 aa21.57■■□□□ 1.04
COL1A2-212ENST00000497316 NUDCQ9Y266 331 aa21.57■■□□□ 1.04
COL1A2-212ENST00000497316 U2SURPO15042 1029 aaKnown RBP21.56■■□□□ 1.04
COL1A2-212ENST00000497316 ZNF530Q6P9A1 599 aaPredicted RBP21.56■■□□□ 1.04
COL1A2-212ENST00000497316 ITGB4P16144 1822 aa21.56■■□□□ 1.04
COL1A2-212ENST00000497316 ZNF316A6NFI3 1004 aaPredicted RBP21.55■■□□□ 1.04
COL1A2-212ENST00000497316 DCAF5Q96JK2 942 aa21.55■■□□□ 1.04
COL1A2-212ENST00000497316 LY75O60449 1722 aa21.55■■□□□ 1.04
COL1A2-212ENST00000497316 SLC27A3Q5K4L6 730 aa21.54■■□□□ 1.04
COL1A2-212ENST00000497316 C1orf141Q5JVX7 400 aa21.53■■□□□ 1.04
COL1A2-212ENST00000497316 MPRIPQ6WCQ1 1025 aa21.53■■□□□ 1.04
COL1A2-212ENST00000497316 ERVV-2B6SEH9 535 aa21.52■■□□□ 1.04
COL1A2-212ENST00000497316 AKAP4Q5JQC9 854 aa21.51■■□□□ 1.03
COL1A2-212ENST00000497316 PIGBQ92521 554 aa21.51■■□□□ 1.03
COL1A2-212ENST00000497316 SMARCC1Q92922 1105 aaPredicted RBP21.51■■□□□ 1.03
COL1A2-212ENST00000497316 KDM6AO15550 1401 aaPredicted RBP21.5■■□□□ 1.03
COL1A2-212ENST00000497316 TMOD3Q9NYL9 352 aa21.5■■□□□ 1.03
COL1A2-212ENST00000497316 PAPPAQ13219 1627 aa21.5■■□□□ 1.03
COL1A2-212ENST00000497316 HMGB2P26583 209 aaKnown RBP21.49■■□□□ 1.03
COL1A2-212ENST00000497316 MTHFSDQ2M296 383 aaKnown RBP21.49■■□□□ 1.03
COL1A2-212ENST00000497316 RSPH6AQ9H0K4 717 aa21.49■■□□□ 1.03
COL1A2-212ENST00000497316 ANO8Q9HCE9 1232 aaPredicted RBP21.49■■□□□ 1.03
COL1A2-212ENST00000497316 LRRC4BQ9NT99 713 aa21.49■■□□□ 1.03
COL1A2-212ENST00000497316 MYBBP1AQ9BQG0 1328 aaKnown RBP21.49■■□□□ 1.03
COL1A2-212ENST00000497316 FCHSD2O94868 740 aa21.48■■□□□ 1.03
COL1A2-212ENST00000497316 U2AF1L5P0DN76 240 aaPredicted RBP21.48■■□□□ 1.03
COL1A2-212ENST00000497316 U2AF1Q01081 240 aaKnown RBP eCLIP21.48■■□□□ 1.03
COL1A2-212ENST00000497316 PALLDQ8WX93 1383 aa21.48■■□□□ 1.03
COL1A2-212ENST00000497316 SCN11AQ9UI33 1791 aa21.47■■□□□ 1.03
COL1A2-212ENST00000497316 STK32BQ9NY57 414 aa21.47■■□□□ 1.03
COL1A2-212ENST00000497316 PRKAR2BP31323 418 aa21.46■■□□□ 1.03
COL1A2-212ENST00000497316 SLC15A2Q16348 729 aa21.46■■□□□ 1.03
COL1A2-212ENST00000497316 GAS2L2Q8NHY3 880 aa21.46■■□□□ 1.03
COL1A2-212ENST00000497316 PRKRIP1Q9H875 184 aaPredicted RBP21.46■■□□□ 1.03
COL1A2-212ENST00000497316 ADAMTS7Q9UKP4 1686 aa21.45■■□□□ 1.02
COL1A2-212ENST00000497316 CCNL1Q9UK58 526 aaPredicted RBP21.45■■□□□ 1.02
COL1A2-212ENST00000497316 CABP4P57796 275 aa21.44■■□□□ 1.02
COL1A2-212ENST00000497316 SPON1Q9HCB6 807 aa21.44■■□□□ 1.02
COL1A2-212ENST00000497316 PPP1R1BQ9UD71 204 aaPredicted RBP21.44■■□□□ 1.02
COL1A2-212ENST00000497316 RNMTO43148 476 aaKnown RBP21.42■■□□□ 1.02
COL1A2-212ENST00000497316 AKT1S1Q96B36 256 aa21.42■■□□□ 1.02
COL1A2-212ENST00000497316 PHACTR3Q96KR7 559 aa21.42■■□□□ 1.02
COL1A2-212ENST00000497316 ATG3Q9NT62 314 aa21.42■■□□□ 1.02
COL1A2-212ENST00000497316 MRC1P22897 1456 aa21.41■■□□□ 1.02
COL1A2-212ENST00000497316 ASAP1Q9ULH1 1129 aa21.41■■□□□ 1.02
COL1A2-212ENST00000497316 MAP3K5Q99683 1374 aa21.4■■□□□ 1.02
COL1A2-212ENST00000497316 NFATC2IPQ8NCF5 419 aa21.4■■□□□ 1.02
COL1A2-212ENST00000497316 LGR6Q9HBX8 967 aa21.4■■□□□ 1.02
COL1A2-212ENST00000497316 VIRMAQ69YN4 1812 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms