RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 TMPRSS4Q9NRS4 437 aa8.1□□□□□ -1.11
PHC3-216ENST00000497171 BCRP11274 1271 aa8.09□□□□□ -1.11
PHC3-216ENST00000497171 NR6A1Q15406 480 aa8.09□□□□□ -1.11
PHC3-216ENST00000497171 LRRN4Q8WUT4 740 aa8.09□□□□□ -1.11
PHC3-216ENST00000497171 IGF1RP08069 1367 aa8.09□□□□□ -1.12
PHC3-216ENST00000497171 CNTNAP5Q8WYK1 1306 aa8.08□□□□□ -1.12
PHC3-216ENST00000497171 XP32Q5T750 250 aa8.08□□□□□ -1.12
PHC3-216ENST00000497171 ZNF837Q96EG3 531 aaPredicted RBP8.08□□□□□ -1.12
PHC3-216ENST00000497171 CUEDC1Q9NWM3 386 aaPredicted RBP8.08□□□□□ -1.12
PHC3-216ENST00000497171 ERVH48-1M5A8F1 160 aa8.07□□□□□ -1.12
PHC3-216ENST00000497171 RNF144AP50876 292 aaPredicted RBP8.07□□□□□ -1.12
PHC3-216ENST00000497171 RHOQP17081 205 aa8.06□□□□□ -1.12
PHC3-216ENST00000497171 PPP2R2DQ66LE6 453 aa8.06□□□□□ -1.12
PHC3-216ENST00000497171 SEPT12Q8IYM1 358 aa8.06□□□□□ -1.12
PHC3-216ENST00000497171 LRRC4BQ9NT99 713 aa8.06□□□□□ -1.12
PHC3-216ENST00000497171 GPR25O00155 361 aa8.05□□□□□ -1.12
PHC3-216ENST00000497171 LILRA1O75019 489 aa8.05□□□□□ -1.12
PHC3-216ENST00000497171 GPC1P35052 558 aa8.05□□□□□ -1.12
PHC3-216ENST00000497171 ATP5J2-PTCD1G3V325 749 aa8.04□□□□□ -1.12
PHC3-216ENST00000497171 K7ELQ4 463 aaPredicted RBP8.04□□□□□ -1.12
PHC3-216ENST00000497171 MEN1O00255 615 aa8.04□□□□□ -1.12
PHC3-216ENST00000497171 MX2P20592 715 aa8.04□□□□□ -1.12
PHC3-216ENST00000497171 ADD1P35611 737 aaKnown RBP8.04□□□□□ -1.12
PHC3-216ENST00000497171 GAS2L1Q99501 681 aaPredicted RBP8.04□□□□□ -1.12
PHC3-216ENST00000497171 CYLDQ9NQC7 956 aa8.04□□□□□ -1.12
PHC3-216ENST00000497171 DYRK1BQ9Y463 629 aa8.04□□□□□ -1.12
PHC3-216ENST00000497171 AP1G2O75843 785 aa8.03□□□□□ -1.12
PHC3-216ENST00000497171 SLC27A3Q5K4L6 730 aa8.03□□□□□ -1.12
PHC3-216ENST00000497171 GTPBP3Q969Y2 492 aaKnown RBP8.03□□□□□ -1.12
PHC3-216ENST00000497171 NLRP3Q96P20 1036 aa8.03□□□□□ -1.12
PHC3-216ENST00000497171 OCSTAMPQ9BR26 566 aa8.03□□□□□ -1.12
PHC3-216ENST00000497171 ESPNB1AK53 854 aa8.02□□□□□ -1.13
PHC3-216ENST00000497171 ALYREFQ86V81 257 aaKnown RBP8.02□□□□□ -1.13
PHC3-216ENST00000497171 PROCP04070 461 aa8.01□□□□□ -1.13
PHC3-216ENST00000497171 DBN1Q16643 649 aa8.01□□□□□ -1.13
PHC3-216ENST00000497171 CCDC125Q86Z20 511 aa8.01□□□□□ -1.13
PHC3-216ENST00000497171 ACDQ96AP0 544 aa8.01□□□□□ -1.13
PHC3-216ENST00000497171 MAP2K3P46734 347 aa8□□□□□ -1.13
PHC3-216ENST00000497171 SKIV2LQ15477 1246 aaKnown RBP8□□□□□ -1.13
PHC3-216ENST00000497171 KDF1Q8NAX2 398 aaPredicted RBP8□□□□□ -1.13
PHC3-216ENST00000497171 MKL2Q9ULH7 1088 aa8□□□□□ -1.13
PHC3-216ENST00000497171 OIP5O43482 229 aa7.99□□□□□ -1.13
PHC3-216ENST00000497171 ESF1Q9H501 851 aaKnown RBP7.99□□□□□ -1.13
PHC3-216ENST00000497171 SH3D19Q5HYK7 790 aa7.98□□□□□ -1.13
PHC3-216ENST00000497171 OXCT2Q9BYC2 517 aaPredicted RBP7.98□□□□□ -1.13
PHC3-216ENST00000497171 NUCKS1Q9H1E3 243 aaKnown RBP7.98□□□□□ -1.13
PHC3-216ENST00000497171 PHF24Q9UPV7 400 aa7.98□□□□□ -1.13
PHC3-216ENST00000497171 PIK3R2O00459 728 aa7.97□□□□□ -1.13
PHC3-216ENST00000497171 POU4F2Q12837 409 aa7.97□□□□□ -1.13
PHC3-216ENST00000497171 CYP2U1Q7Z449 544 aa7.97□□□□□ -1.13
PHC3-216ENST00000497171 RRAGCQ9HB90 399 aa7.97□□□□□ -1.13
PHC3-216ENST00000497171 SLC24A3Q9HC58 644 aa7.97□□□□□ -1.13
PHC3-216ENST00000497171 A0A1W2PRU2 124 aa7.96□□□□□ -1.14
PHC3-216ENST00000497171 WDR44Q5JSH3 913 aa7.96□□□□□ -1.14
PHC3-216ENST00000497171 RNF20Q5VTR2 975 aa7.96□□□□□ -1.14
PHC3-216ENST00000497171 TIMMDC1Q9NPL8 285 aa7.96□□□□□ -1.14
PHC3-216ENST00000497171 ITGB2P05107 769 aa7.95□□□□□ -1.14
PHC3-216ENST00000497171 USP17L8P0C7I0 530 aa7.95□□□□□ -1.14
PHC3-216ENST00000497171 BAG6P46379 1132 aa7.95□□□□□ -1.14
PHC3-216ENST00000497171 CC2D2BQ6DHV5 1058 aa7.95□□□□□ -1.14
PHC3-216ENST00000497171 NBPF10Q6P3W6 841 aaKnown RBP7.95□□□□□ -1.14
PHC3-216ENST00000497171 TAS1R3Q7RTX0 852 aa7.95□□□□□ -1.14
PHC3-216ENST00000497171 NBPF15Q8N660 670 aa7.95□□□□□ -1.14
PHC3-216ENST00000497171 ZNF592Q92610 1267 aa7.95□□□□□ -1.14
PHC3-216ENST00000497171 DDRGK1Q96HY6 314 aa7.95□□□□□ -1.14
PHC3-216ENST00000497171 GDF2Q9UK05 429 aaPredicted RBP7.95□□□□□ -1.14
PHC3-216ENST00000497171 PCDHB9Q9Y5E1 797 aa7.95□□□□□ -1.14
PHC3-216ENST00000497171 F11P03951 625 aa7.94□□□□□ -1.14
PHC3-216ENST00000497171 WASLO00401 505 aaPredicted RBP7.93□□□□□ -1.14
PHC3-216ENST00000497171 GTF2E1P29083 439 aaPredicted RBP7.93□□□□□ -1.14
PHC3-216ENST00000497171 CLN3Q13286 438 aa7.93□□□□□ -1.14
PHC3-216ENST00000497171 PROCA1Q8NCQ7 364 aaPredicted RBP7.93□□□□□ -1.14
PHC3-216ENST00000497171 EPS8L1Q8TE68 723 aa7.93□□□□□ -1.14
PHC3-216ENST00000497171 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.93□□□□□ -1.14
PHC3-216ENST00000497171 CFHR5Q9BXR6 569 aa7.93□□□□□ -1.14
PHC3-216ENST00000497171 SPATA31C2B4DYI2 1134 aa7.92□□□□□ -1.14
PHC3-216ENST00000497171 AMPD1P23109 780 aa7.92□□□□□ -1.14
PHC3-216ENST00000497171 ZBBXA8MT70 800 aa7.91□□□□□ -1.14
PHC3-216ENST00000497171 GIGYF1O75420 1035 aaPredicted RBP7.91□□□□□ -1.14
PHC3-216ENST00000497171 ERVK-9P63128 1117 aa7.91□□□□□ -1.14
PHC3-216ENST00000497171 SNRPNP63162 240 aaKnown RBP7.91□□□□□ -1.14
PHC3-216ENST00000497171 GRIN2CQ14957 1233 aa7.91□□□□□ -1.14
PHC3-216ENST00000497171 Q8N3U1 123 aa7.91□□□□□ -1.14
PHC3-216ENST00000497171 GOLGA6L1Q8N7Z2 621 aa7.91□□□□□ -1.14
PHC3-216ENST00000497171 HMX1Q9NP08 348 aaPredicted RBP7.91□□□□□ -1.14
PHC3-216ENST00000497171 KRBA1A5PL33 1030 aa7.9□□□□□ -1.14
PHC3-216ENST00000497171 FURINP09958 794 aa7.9□□□□□ -1.14
PHC3-216ENST00000497171 CSB-PGBD3P0DP91 1061 aa7.9□□□□□ -1.14
PHC3-216ENST00000497171 PGBD3Q8N328 593 aa7.9□□□□□ -1.14
PHC3-216ENST00000497171 GRIP2Q9C0E4 1043 aa7.9□□□□□ -1.14
PHC3-216ENST00000497171 MCCD1P59942 119 aaPredicted RBP7.89□□□□□ -1.15
PHC3-216ENST00000497171 GPAMQ9HCL2 828 aa7.89□□□□□ -1.15
PHC3-216ENST00000497171 ZNF330Q9Y3S2 320 aaPredicted RBP7.89□□□□□ -1.15
PHC3-216ENST00000497171 A0A1B0GTH6 734 aa7.88□□□□□ -1.15
PHC3-216ENST00000497171 LBRQ14739 615 aaKnown RBP7.88□□□□□ -1.15
PHC3-216ENST00000497171 EDARADDQ8WWZ3 215 aa7.88□□□□□ -1.15
PHC3-216ENST00000497171 KLRG1Q96E93 195 aa7.88□□□□□ -1.15
PHC3-216ENST00000497171 ARHGEF10LQ9HCE6 1279 aa7.88□□□□□ -1.15
PHC3-216ENST00000497171 SHISA8B8ZZ34 492 aa7.87□□□□□ -1.15
PHC3-216ENST00000497171 GNASQ5JWF2 1037 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms