RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 ADH1AP07327 375 aa9.23□□□□□ -0.93
SOX2-OT-216ENST00000497122 CNTNAP3BQ96NU0 1288 aa9.22□□□□□ -0.93
SOX2-OT-216ENST00000497122 TRAIPQ9BWF2 469 aa9.22□□□□□ -0.93
SOX2-OT-216ENST00000497122 CNTNAP3Q9BZ76 1288 aa9.22□□□□□ -0.93
SOX2-OT-216ENST00000497122 ZBBXA8MT70 800 aa9.21□□□□□ -0.94
SOX2-OT-216ENST00000497122 ADD1P35611 737 aaKnown RBP9.21□□□□□ -0.94
SOX2-OT-216ENST00000497122 GPR161Q8N6U8 529 aaKnown RBP9.2□□□□□ -0.94
SOX2-OT-216ENST00000497122 RNF217Q8TC41 542 aa9.2□□□□□ -0.94
SOX2-OT-216ENST00000497122 LILRA1O75019 489 aa9.19□□□□□ -0.94
SOX2-OT-216ENST00000497122 GIGYF1O75420 1035 aaPredicted RBP9.19□□□□□ -0.94
SOX2-OT-216ENST00000497122 FBXO45P0C2W1 286 aa9.19□□□□□ -0.94
SOX2-OT-216ENST00000497122 VWA5B2Q8N398 1253 aa9.19□□□□□ -0.94
SOX2-OT-216ENST00000497122 FNBP4Q8N3X1 1017 aaPredicted RBP9.19□□□□□ -0.94
SOX2-OT-216ENST00000497122 RETREG2Q8NC44 543 aa9.19□□□□□ -0.94
SOX2-OT-216ENST00000497122 COL25A1Q9BXS0 654 aaPredicted RBP9.19□□□□□ -0.94
SOX2-OT-216ENST00000497122 SLC35F4A4IF30 521 aa9.18□□□□□ -0.94
SOX2-OT-216ENST00000497122 ESPNB1AK53 854 aa9.18□□□□□ -0.94
SOX2-OT-216ENST00000497122 ITGA6P23229 1130 aa9.18□□□□□ -0.94
SOX2-OT-216ENST00000497122 PTGIRP43119 386 aa9.18□□□□□ -0.94
SOX2-OT-216ENST00000497122 TRIM52Q96A61 297 aa9.18□□□□□ -0.94
SOX2-OT-216ENST00000497122 COG6Q9Y2V7 657 aa9.18□□□□□ -0.94
SOX2-OT-216ENST00000497122 ZNF330Q9Y3S2 320 aaPredicted RBP9.18□□□□□ -0.94
SOX2-OT-216ENST00000497122 MEN1O00255 615 aa9.17□□□□□ -0.94
SOX2-OT-216ENST00000497122 KRT76Q01546 638 aa9.17□□□□□ -0.94
SOX2-OT-216ENST00000497122 SEPT12Q8IYM1 358 aa9.17□□□□□ -0.94
SOX2-OT-216ENST00000497122 GJD4Q96KN9 370 aaPredicted RBP9.17□□□□□ -0.94
SOX2-OT-216ENST00000497122 FOXD4L5Q5VV16 416 aaPredicted RBP9.16□□□□□ -0.94
SOX2-OT-216ENST00000497122 SV2AQ7L0J3 742 aa9.16□□□□□ -0.94
SOX2-OT-216ENST00000497122 LYSMD3Q7Z3D4 306 aa9.16□□□□□ -0.94
SOX2-OT-216ENST00000497122 PRICKLE2Q7Z3G6 844 aa9.16□□□□□ -0.94
SOX2-OT-216ENST00000497122 ESF1Q9H501 851 aaKnown RBP9.16□□□□□ -0.94
SOX2-OT-216ENST00000497122 ATP5J2-PTCD1G3V325 749 aa9.15□□□□□ -0.94
SOX2-OT-216ENST00000497122 TMCO4Q5TGY1 634 aa9.15□□□□□ -0.94
SOX2-OT-216ENST00000497122 RHOQP17081 205 aa9.14□□□□□ -0.95
SOX2-OT-216ENST00000497122 RNFT1Q5M7Z0 435 aa9.14□□□□□ -0.95
SOX2-OT-216ENST00000497122 SVOPQ8N4V2 548 aa9.13□□□□□ -0.95
SOX2-OT-216ENST00000497122 KDF1Q8NAX2 398 aaPredicted RBP9.13□□□□□ -0.95
SOX2-OT-216ENST00000497122 NANOS1Q8WY41 292 aaKnown RBP9.13□□□□□ -0.95
SOX2-OT-216ENST00000497122 SNRKQ9NRH2 765 aa9.13□□□□□ -0.95
SOX2-OT-216ENST00000497122 NDUFB9Q9Y6M9 179 aa9.13□□□□□ -0.95
SOX2-OT-216ENST00000497122 SENP3-EIF4A1A0A087X0R7 540 aa9.12□□□□□ -0.95
SOX2-OT-216ENST00000497122 NR1H3Q13133 447 aa9.12□□□□□ -0.95
SOX2-OT-216ENST00000497122 RNF20Q5VTR2 975 aa9.12□□□□□ -0.95
SOX2-OT-216ENST00000497122 GZF1Q9H116 711 aaPredicted RBP9.12□□□□□ -0.95
SOX2-OT-216ENST00000497122 PCDHB11Q9Y5F2 797 aa9.12□□□□□ -0.95
SOX2-OT-216ENST00000497122 SLC27A3Q5K4L6 730 aa9.11□□□□□ -0.95
SOX2-OT-216ENST00000497122 NLRP3Q96P20 1036 aa9.11□□□□□ -0.95
SOX2-OT-216ENST00000497122 CC2D2BQ6DHV5 1058 aa9.1□□□□□ -0.95
SOX2-OT-216ENST00000497122 RIPOR1Q6ZS17 1223 aa9.1□□□□□ -0.95
SOX2-OT-216ENST00000497122 WWC1Q8IX03 1113 aa9.1□□□□□ -0.95
SOX2-OT-216ENST00000497122 MTMR14Q8NCE2 650 aa9.1□□□□□ -0.95
SOX2-OT-216ENST00000497122 A0A1W2PRU2 124 aa9.09□□□□□ -0.95
SOX2-OT-216ENST00000497122 BANK1Q8NDB2 785 aa9.09□□□□□ -0.95
SOX2-OT-216ENST00000497122 ZNF592Q92610 1267 aa9.09□□□□□ -0.95
SOX2-OT-216ENST00000497122 ABL2P42684 1182 aa9.08□□□□□ -0.96
SOX2-OT-216ENST00000497122 SCTRP47872 440 aa9.08□□□□□ -0.96
SOX2-OT-216ENST00000497122 RNF144AP50876 292 aaPredicted RBP9.08□□□□□ -0.96
SOX2-OT-216ENST00000497122 IRF5Q13568 498 aa9.08□□□□□ -0.96
SOX2-OT-216ENST00000497122 CYP2U1Q7Z449 544 aa9.08□□□□□ -0.96
SOX2-OT-216ENST00000497122 CALR3Q96L12 384 aaKnown RBP9.08□□□□□ -0.96
SOX2-OT-216ENST00000497122 GDPD2Q9HCC8 539 aa9.08□□□□□ -0.96
SOX2-OT-216ENST00000497122 MTMR7Q9Y216 660 aa9.08□□□□□ -0.96
SOX2-OT-216ENST00000497122 MFAP1P55081 439 aaKnown RBP9.07□□□□□ -0.96
SOX2-OT-216ENST00000497122 MCCD1P59942 119 aaPredicted RBP9.07□□□□□ -0.96
SOX2-OT-216ENST00000497122 ERVK-9P63128 1117 aa9.07□□□□□ -0.96
SOX2-OT-216ENST00000497122 CUEDC1Q9NWM3 386 aaPredicted RBP9.07□□□□□ -0.96
SOX2-OT-216ENST00000497122 ZNF385CQ66K41 422 aaPredicted RBP9.06□□□□□ -0.96
SOX2-OT-216ENST00000497122 CCDC125Q86Z20 511 aa9.06□□□□□ -0.96
SOX2-OT-216ENST00000497122 WHAMMQ8TF30 809 aa9.06□□□□□ -0.96
SOX2-OT-216ENST00000497122 GAS2L1Q99501 681 aaPredicted RBP9.06□□□□□ -0.96
SOX2-OT-216ENST00000497122 ARHGEF10LQ9HCE6 1279 aa9.06□□□□□ -0.96
SOX2-OT-216ENST00000497122 RAB6BQ9NRW1 208 aa9.06□□□□□ -0.96
SOX2-OT-216ENST00000497122 ADAMTS8Q9UP79 889 aa9.06□□□□□ -0.96
SOX2-OT-216ENST00000497122 ACIN1Q9UKV3 1341 aaKnown RBP9.05□□□□□ -0.96
SOX2-OT-216ENST00000497122 POU4F2Q12837 409 aa9.05□□□□□ -0.96
SOX2-OT-216ENST00000497122 FOXD4L4Q8WXT5 416 aaPredicted RBP9.05□□□□□ -0.96
SOX2-OT-216ENST00000497122 GPR25O00155 361 aa9.04□□□□□ -0.96
SOX2-OT-216ENST00000497122 RBM25P49756 843 aaKnown RBP9.04□□□□□ -0.96
SOX2-OT-216ENST00000497122 FOXR1Q6PIV2 292 aa9.04□□□□□ -0.96
SOX2-OT-216ENST00000497122 RGS22Q8NE09 1264 aa9.04□□□□□ -0.96
SOX2-OT-216ENST00000497122 RNF225M0QZC1 329 aaPredicted RBP9.03□□□□□ -0.96
SOX2-OT-216ENST00000497122 ADAMTS2O95450 1211 aa9.03□□□□□ -0.96
SOX2-OT-216ENST00000497122 MYCP01106 439 aaPredicted RBP9.03□□□□□ -0.96
SOX2-OT-216ENST00000497122 GPC1P35052 558 aa9.03□□□□□ -0.96
SOX2-OT-216ENST00000497122 MAP3K10Q02779 954 aa9.03□□□□□ -0.96
SOX2-OT-216ENST00000497122 GLMNQ92990 594 aa9.03□□□□□ -0.96
SOX2-OT-216ENST00000497122 GPR37L1O60883 481 aa9.02□□□□□ -0.97
SOX2-OT-216ENST00000497122 PPP1R15AO75807 674 aaPredicted RBP9.02□□□□□ -0.97
SOX2-OT-216ENST00000497122 SLURP2P0DP57 97 aa9.02□□□□□ -0.97
SOX2-OT-216ENST00000497122 MARSP56192 900 aaKnown RBP9.02□□□□□ -0.97
SOX2-OT-216ENST00000497122 CLN3Q13286 438 aa9.02□□□□□ -0.97
SOX2-OT-216ENST00000497122 ZNF837Q96EG3 531 aaPredicted RBP9.02□□□□□ -0.97
SOX2-OT-216ENST00000497122 OSBPL3Q9H4L5 887 aa9.02□□□□□ -0.97
SOX2-OT-216ENST00000497122 PRM3Q9NNZ6 103 aa9.02□□□□□ -0.97
SOX2-OT-216ENST00000497122 TBC1D2BQ9UPU7 963 aa9.02□□□□□ -0.97
SOX2-OT-216ENST00000497122 POM121CA8CG34 1229 aa9.01□□□□□ -0.97
SOX2-OT-216ENST00000497122 KCNMA1Q12791 1236 aa9.01□□□□□ -0.97
SOX2-OT-216ENST00000497122 TRIM22Q8IYM9 498 aa9.01□□□□□ -0.97
SOX2-OT-216ENST00000497122 GTPBP3Q969Y2 492 aaKnown RBP9.01□□□□□ -0.97
SOX2-OT-216ENST00000497122 PDE4CQ08493 712 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms