RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 APBA3O96018 575 aa25.96■■□□□ 1.75
CTDSP1-213ENST00000496785 DDX10Q13206 875 aaKnown RBP25.96■■□□□ 1.75
CTDSP1-213ENST00000496785 DEFB132Q7Z7B7 95 aa25.96■■□□□ 1.75
CTDSP1-213ENST00000496785 CFAP53Q96M91 514 aa25.96■■□□□ 1.75
CTDSP1-213ENST00000496785 BCL11BQ9C0K0 894 aaPredicted RBP25.96■■□□□ 1.75
CTDSP1-213ENST00000496785 SPG7Q9UQ90 795 aa25.96■■□□□ 1.75
CTDSP1-213ENST00000496785 PARD3Q8TEW0 1356 aa25.95■■□□□ 1.75
CTDSP1-213ENST00000496785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.95■■□□□ 1.74
CTDSP1-213ENST00000496785 SBF2Q86WG5 1849 aa25.95■■□□□ 1.74
CTDSP1-213ENST00000496785 DIAPH1O60610 1272 aaKnown RBP25.94■■□□□ 1.74
CTDSP1-213ENST00000496785 IL13P35225 146 aa25.94■■□□□ 1.74
CTDSP1-213ENST00000496785 PKD1L3Q7Z443 1732 aa25.92■■□□□ 1.74
CTDSP1-213ENST00000496785 SHANK3Q9BYB0 1731 aa25.91■■□□□ 1.74
CTDSP1-213ENST00000496785 NHSQ6T4R5 1651 aa25.9■■□□□ 1.74
CTDSP1-213ENST00000496785 PPP2R1AP30153 589 aa25.9■■□□□ 1.74
CTDSP1-213ENST00000496785 EN1Q05925 392 aaPredicted RBP25.9■■□□□ 1.74
CTDSP1-213ENST00000496785 KDRP35968 1356 aa25.89■■□□□ 1.74
CTDSP1-213ENST00000496785 SULT6B1Q6IMI4 303 aa25.88■■□□□ 1.73
CTDSP1-213ENST00000496785 ZNF316A6NFI3 1004 aaPredicted RBP25.87■■□□□ 1.73
CTDSP1-213ENST00000496785 PLSCR1O15162 318 aa25.87■■□□□ 1.73
CTDSP1-213ENST00000496785 RALBP1Q15311 655 aa25.87■■□□□ 1.73
CTDSP1-213ENST00000496785 AMOTQ4VCS5 1084 aa25.87■■□□□ 1.73
CTDSP1-213ENST00000496785 PLEKHO1Q53GL0 409 aaPredicted RBP25.87■■□□□ 1.73
CTDSP1-213ENST00000496785 ACSBG1Q96GR2 724 aa25.87■■□□□ 1.73
CTDSP1-213ENST00000496785 RGPD3A6NKT7 1758 aaPredicted RBP25.87■■□□□ 1.73
CTDSP1-213ENST00000496785 RGPD4Q7Z3J3 1758 aa25.87■■□□□ 1.73
CTDSP1-213ENST00000496785 COL3A1P02461 1466 aaPredicted RBP25.86■■□□□ 1.73
CTDSP1-213ENST00000496785 CAMKK2Q96RR4 588 aa25.86■■□□□ 1.73
CTDSP1-213ENST00000496785 NUDCQ9Y266 331 aa25.86■■□□□ 1.73
CTDSP1-213ENST00000496785 CYP27B1O15528 508 aa25.84■■□□□ 1.73
CTDSP1-213ENST00000496785 EZH2Q15910 746 aaKnown RBP25.84■■□□□ 1.73
CTDSP1-213ENST00000496785 IFNL2Q8IZJ0 200 aa25.84■■□□□ 1.73
CTDSP1-213ENST00000496785 KCNQ2O43526 872 aa25.83■■□□□ 1.73
CTDSP1-213ENST00000496785 AEBP1Q8IUX7 1158 aa25.83■■□□□ 1.73
CTDSP1-213ENST00000496785 DOT1LQ8TEK3 1739 aa25.83■■□□□ 1.72
CTDSP1-213ENST00000496785 U2SURPO15042 1029 aaKnown RBP25.82■■□□□ 1.72
CTDSP1-213ENST00000496785 SYTL4Q96C24 671 aaPredicted RBP25.82■■□□□ 1.72
CTDSP1-213ENST00000496785 HSP90AB1P08238 724 aaKnown RBP25.81■■□□□ 1.72
CTDSP1-213ENST00000496785 NKX1-1Q15270 411 aaPredicted RBP25.81■■□□□ 1.72
CTDSP1-213ENST00000496785 PHKG2P15735 406 aa25.8■■□□□ 1.72
CTDSP1-213ENST00000496785 PTF1AQ7RTS3 328 aa25.8■■□□□ 1.72
CTDSP1-213ENST00000496785 KAT6BQ8WYB5 2073 aa25.79■■□□□ 1.72
CTDSP1-213ENST00000496785 PRIM1P49642 420 aaKnown RBP25.79■■□□□ 1.72
CTDSP1-213ENST00000496785 RREB1Q92766 1687 aa25.79■■□□□ 1.72
CTDSP1-213ENST00000496785 HMOX1P09601 288 aa25.78■■□□□ 1.72
CTDSP1-213ENST00000496785 C1orf141Q5JVX7 400 aa25.78■■□□□ 1.72
CTDSP1-213ENST00000496785 ZNF530Q6P9A1 599 aaPredicted RBP25.78■■□□□ 1.72
CTDSP1-213ENST00000496785 BTAF1O14981 1849 aa25.78■■□□□ 1.72
CTDSP1-213ENST00000496785 NBPF14Q5TI25 921 aa25.76■■□□□ 1.71
CTDSP1-213ENST00000496785 MYBBP1AQ9BQG0 1328 aaKnown RBP25.75■■□□□ 1.71
CTDSP1-213ENST00000496785 DCAF5Q96JK2 942 aa25.74■■□□□ 1.71
CTDSP1-213ENST00000496785 NUP188Q5SRE5 1749 aa25.72■■□□□ 1.71
CTDSP1-213ENST00000496785 U2AF1L5P0DN76 240 aaPredicted RBP25.72■■□□□ 1.71
CTDSP1-213ENST00000496785 U2AF1Q01081 240 aaKnown RBP eCLIP25.72■■□□□ 1.71
CTDSP1-213ENST00000496785 TXNRD1Q16881 649 aa25.72■■□□□ 1.71
CTDSP1-213ENST00000496785 HMGB2P26583 209 aaKnown RBP25.7■■□□□ 1.7
CTDSP1-213ENST00000496785 AKAP4Q5JQC9 854 aa25.7■■□□□ 1.7
CTDSP1-213ENST00000496785 MPRIPQ6WCQ1 1025 aa25.7■■□□□ 1.7
CTDSP1-213ENST00000496785 TMOD3Q9NYL9 352 aa25.7■■□□□ 1.7
CTDSP1-213ENST00000496785 TOGARAM1Q9Y4F4 1720 aa25.69■■□□□ 1.7
CTDSP1-213ENST00000496785 ERVV-2B6SEH9 535 aa25.69■■□□□ 1.7
CTDSP1-213ENST00000496785 SLC27A3Q5K4L6 730 aa25.69■■□□□ 1.7
CTDSP1-213ENST00000496785 PRKRIP1Q9H875 184 aaPredicted RBP25.69■■□□□ 1.7
CTDSP1-213ENST00000496785 FCHSD2O94868 740 aa25.68■■□□□ 1.7
CTDSP1-213ENST00000496785 GAS2L2Q8NHY3 880 aa25.68■■□□□ 1.7
CTDSP1-213ENST00000496785 SMARCC1Q92922 1105 aaPredicted RBP25.68■■□□□ 1.7
CTDSP1-213ENST00000496785 ITGB4P16144 1822 aa25.66■■□□□ 1.7
CTDSP1-213ENST00000496785 NEFMP07197 916 aa25.66■■□□□ 1.7
CTDSP1-213ENST00000496785 PROM2Q8N271 834 aa25.66■■□□□ 1.7
CTDSP1-213ENST00000496785 RSPH6AQ9H0K4 717 aa25.66■■□□□ 1.7
CTDSP1-213ENST00000496785 PRKAR2BP31323 418 aa25.65■■□□□ 1.7
CTDSP1-213ENST00000496785 PNNQ9H307 717 aaKnown RBP25.65■■□□□ 1.7
CTDSP1-213ENST00000496785 MTHFSDQ2M296 383 aaKnown RBP25.64■■□□□ 1.7
CTDSP1-213ENST00000496785 PIGBQ92521 554 aa25.64■■□□□ 1.7
CTDSP1-213ENST00000496785 KDM6AO15550 1401 aaPredicted RBP25.63■■□□□ 1.69
CTDSP1-213ENST00000496785 PALLDQ8WX93 1383 aa25.63■■□□□ 1.69
CTDSP1-213ENST00000496785 LY75O60449 1722 aa25.63■■□□□ 1.69
CTDSP1-213ENST00000496785 CABP4P57796 275 aa25.62■■□□□ 1.69
CTDSP1-213ENST00000496785 R3HDM1Q15032 1099 aaKnown RBP25.62■■□□□ 1.69
CTDSP1-213ENST00000496785 STK32BQ9NY57 414 aa25.62■■□□□ 1.69
CTDSP1-213ENST00000496785 CCNL1Q9UK58 526 aaPredicted RBP25.61■■□□□ 1.69
CTDSP1-213ENST00000496785 PSDA5PKW4 1024 aaPredicted RBP25.6■■□□□ 1.69
CTDSP1-213ENST00000496785 MAP3K5Q99683 1374 aa25.59■■□□□ 1.69
CTDSP1-213ENST00000496785 SCN11AQ9UI33 1791 aa25.59■■□□□ 1.69
CTDSP1-213ENST00000496785 GNAT3A8MTJ3 354 aa25.58■■□□□ 1.69
CTDSP1-213ENST00000496785 LRRC4BQ9NT99 713 aa25.57■■□□□ 1.68
CTDSP1-213ENST00000496785 PAPPAQ13219 1627 aa25.56■■□□□ 1.68
CTDSP1-213ENST00000496785 RNMTO43148 476 aaKnown RBP25.56■■□□□ 1.68
CTDSP1-213ENST00000496785 ANP32CO43423 234 aa25.56■■□□□ 1.68
CTDSP1-213ENST00000496785 SLC15A2Q16348 729 aa25.56■■□□□ 1.68
CTDSP1-213ENST00000496785 ANO8Q9HCE9 1232 aaPredicted RBP25.56■■□□□ 1.68
CTDSP1-213ENST00000496785 WDR43Q15061 677 aaKnown RBP eCLIP25.55■■□□□ 1.68
CTDSP1-213ENST00000496785 PHACTR3Q96KR7 559 aa25.55■■□□□ 1.68
CTDSP1-213ENST00000496785 MRC1P22897 1456 aa25.54■■□□□ 1.68
CTDSP1-213ENST00000496785 SLC52A2Q9HAB3 445 aa25.54■■□□□ 1.68
CTDSP1-213ENST00000496785 ASAP1Q9ULH1 1129 aa25.54■■□□□ 1.68
CTDSP1-213ENST00000496785 MAPK8IP3Q9UPT6 1336 aa25.54■■□□□ 1.68
CTDSP1-213ENST00000496785 ADAMTS7Q9UKP4 1686 aa25.54■■□□□ 1.68
CTDSP1-213ENST00000496785 NFATC2IPQ8NCF5 419 aa25.53■■□□□ 1.68
CTDSP1-213ENST00000496785 ATG3Q9NT62 314 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms