RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 TATP17735 454 aaPredicted RBP13.14□□□□□ -0.31
C4A-258ENST00000496659 LMOD3Q0VAK6 560 aa13.14□□□□□ -0.31
C4A-258ENST00000496659 NCBP3Q53F19 620 aaKnown RBP13.14□□□□□ -0.31
C4A-258ENST00000496659 LARP1Q6PKG0 1096 aaKnown RBP13.14□□□□□ -0.31
C4A-258ENST00000496659 DEFB132Q7Z7B7 95 aa13.14□□□□□ -0.31
C4A-258ENST00000496659 AEBP1Q8IUX7 1158 aa13.14□□□□□ -0.31
C4A-258ENST00000496659 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
C4A-258ENST00000496659 GAS2L2Q8NHY3 880 aa13.14□□□□□ -0.31
C4A-258ENST00000496659 PLEKHF1Q96S99 279 aa13.14□□□□□ -0.31
C4A-258ENST00000496659 RGPD2P0DJD1 1756 aa13.14□□□□□ -0.31
C4A-258ENST00000496659 AMOTQ4VCS5 1084 aa13.13□□□□□ -0.31
C4A-258ENST00000496659 FAM182BQ5T319 152 aa13.13□□□□□ -0.31
C4A-258ENST00000496659 KRT27Q7Z3Y8 459 aa13.13□□□□□ -0.31
C4A-258ENST00000496659 CCDC125Q86Z20 511 aa13.13□□□□□ -0.31
C4A-258ENST00000496659 THRAP3Q9Y2W1 955 aaKnown RBP13.13□□□□□ -0.31
C4A-258ENST00000496659 SPATA31A5Q5VU36 1347 aa13.13□□□□□ -0.31
C4A-258ENST00000496659 ZBED9Q6R2W3 1325 aa13.13□□□□□ -0.31
C4A-258ENST00000496659 SPATA31A7Q8IWB4 1347 aa13.13□□□□□ -0.31
C4A-258ENST00000496659 PLEKHO1Q53GL0 409 aaPredicted RBP13.12□□□□□ -0.31
C4A-258ENST00000496659 TCP11L2Q8N4U5 519 aa13.12□□□□□ -0.31
C4A-258ENST00000496659 CDCA7Q9BWT1 371 aaPredicted RBP13.12□□□□□ -0.31
C4A-258ENST00000496659 A0A0G2JS52 829 aa13.11□□□□□ -0.31
C4A-258ENST00000496659 APAF1O14727 1248 aa13.11□□□□□ -0.31
C4A-258ENST00000496659 IL2RBP14784 551 aa13.11□□□□□ -0.31
C4A-258ENST00000496659 MYT1Q01538 1121 aa13.11□□□□□ -0.31
C4A-258ENST00000496659 NFE2L2Q16236 605 aa13.11□□□□□ -0.31
C4A-258ENST00000496659 SPG7Q9UQ90 795 aa13.11□□□□□ -0.31
C4A-258ENST00000496659 OVOS2A0A0G2JMS6 1433 aa13.11□□□□□ -0.31
C4A-258ENST00000496659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.1□□□□□ -0.31
C4A-258ENST00000496659 WNK3Q9BYP7 1800 aa13.1□□□□□ -0.31
C4A-258ENST00000496659 SPATA31A1Q5TZJ5 1347 aa13.1□□□□□ -0.31
C4A-258ENST00000496659 MEGF6O75095 1541 aa13.09□□□□□ -0.31
C4A-258ENST00000496659 TMPOP42166 694 aaKnown RBP13.09□□□□□ -0.31
C4A-258ENST00000496659 CALD1Q05682 793 aaKnown RBP13.09□□□□□ -0.31
C4A-258ENST00000496659 CCDC27Q2M243 656 aa13.09□□□□□ -0.31
C4A-258ENST00000496659 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
C4A-258ENST00000496659 USP35Q9P2H5 1018 aa13.09□□□□□ -0.31
C4A-258ENST00000496659 RIPK4P57078 832 aa13.08□□□□□ -0.32
C4A-258ENST00000496659 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
C4A-258ENST00000496659 RTF1Q92541 710 aaKnown RBP13.08□□□□□ -0.32
C4A-258ENST00000496659 PHACTR3Q96KR7 559 aa13.08□□□□□ -0.32
C4A-258ENST00000496659 PCDH11XQ9BZA7 1347 aa13.08□□□□□ -0.32
C4A-258ENST00000496659 PCDH11YQ9BZA8 1340 aa13.08□□□□□ -0.32
C4A-258ENST00000496659 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
C4A-258ENST00000496659 DISP2A7MBM2 1401 aa13.07□□□□□ -0.32
C4A-258ENST00000496659 HTATSF1O43719 755 aaKnown RBP13.07□□□□□ -0.32
C4A-258ENST00000496659 NEUROD2Q15784 382 aa13.07□□□□□ -0.32
C4A-258ENST00000496659 ZNF530Q6P9A1 599 aaPredicted RBP13.07□□□□□ -0.32
C4A-258ENST00000496659 BARGINQ6ZT62 677 aa13.07□□□□□ -0.32
C4A-258ENST00000496659 HSP90AB1P08238 724 aaKnown RBP13.06□□□□□ -0.32
C4A-258ENST00000496659 PDE3BQ13370 1112 aa13.06□□□□□ -0.32
C4A-258ENST00000496659 MTHFSDQ2M296 383 aaKnown RBP13.06□□□□□ -0.32
C4A-258ENST00000496659 AKAP4Q5JQC9 854 aa13.06□□□□□ -0.32
C4A-258ENST00000496659 RRP7AQ9Y3A4 280 aaKnown RBP13.06□□□□□ -0.32
C4A-258ENST00000496659 SALL2Q9Y467 1007 aaPredicted RBP13.06□□□□□ -0.32
C4A-258ENST00000496659 TNS2Q63HR2 1409 aa13.05□□□□□ -0.32
C4A-258ENST00000496659 GNAT3A8MTJ3 354 aa13.05□□□□□ -0.32
C4A-258ENST00000496659 SF3B2Q13435 895 aaKnown RBP13.05□□□□□ -0.32
C4A-258ENST00000496659 ZCRB1Q8TBF4 217 aaKnown RBP13.05□□□□□ -0.32
C4A-258ENST00000496659 THSD7AQ9UPZ6 1657 aa13.05□□□□□ -0.32
C4A-258ENST00000496659 CENPBP07199 599 aaPredicted RBP13.04□□□□□ -0.32
C4A-258ENST00000496659 IFNL2Q8IZJ0 200 aa13.04□□□□□ -0.32
C4A-258ENST00000496659 LRRC37A3O60309 1634 aa13.03□□□□□ -0.32
C4A-258ENST00000496659 EXOC5O00471 708 aa13.03□□□□□ -0.32
C4A-258ENST00000496659 EN1Q05925 392 aaPredicted RBP13.03□□□□□ -0.32
C4A-258ENST00000496659 GOLGA2Q08379 1002 aa13.03□□□□□ -0.32
C4A-258ENST00000496659 WDR63Q8IWG1 891 aa13.03□□□□□ -0.32
C4A-258ENST00000496659 WWC1Q8IX03 1113 aa13.03□□□□□ -0.32
C4A-258ENST00000496659 SRCAPQ6ZRS2 3230 aa13.03□□□□□ -0.32
C4A-258ENST00000496659 DDB1Q16531 1140 aa13.02□□□□□ -0.33
C4A-258ENST00000496659 IL16Q14005 1332 aa13.02□□□□□ -0.33
C4A-258ENST00000496659 ZNF521Q96K83 1311 aa13.02□□□□□ -0.33
C4A-258ENST00000496659 DLG5Q8TDM6 1919 aa13.01□□□□□ -0.33
C4A-258ENST00000496659 SENP3-EIF4A1A0A087X0R7 540 aa13.01□□□□□ -0.33
C4A-258ENST00000496659 E9PSI1 815 aa13.01□□□□□ -0.33
C4A-258ENST00000496659 PHKG2P15735 406 aa13.01□□□□□ -0.33
C4A-258ENST00000496659 MYH16Q9H6N6 1097 aa13.01□□□□□ -0.33
C4A-258ENST00000496659 TRIM35Q9UPQ4 493 aa13.01□□□□□ -0.33
C4A-258ENST00000496659 TRIM37O94972 964 aa13□□□□□ -0.33
C4A-258ENST00000496659 BAG6P46379 1132 aa13□□□□□ -0.33
C4A-258ENST00000496659 DCAF5Q96JK2 942 aa13□□□□□ -0.33
C4A-258ENST00000496659 SHANK3Q9BYB0 1731 aa12.99□□□□□ -0.33
C4A-258ENST00000496659 PSDA5PKW4 1024 aaPredicted RBP12.99□□□□□ -0.33
C4A-258ENST00000496659 GNAI1P63096 354 aa12.99□□□□□ -0.33
C4A-258ENST00000496659 TEFQ10587 303 aa12.99□□□□□ -0.33
C4A-258ENST00000496659 DDX54Q8TDD1 881 aaKnown RBP12.99□□□□□ -0.33
C4A-258ENST00000496659 ADAMTS7Q9UKP4 1686 aa12.99□□□□□ -0.33
C4A-258ENST00000496659 CEMIPQ8WUJ3 1361 aa12.98□□□□□ -0.33
C4A-258ENST00000496659 EZH2Q15910 746 aaKnown RBP12.98□□□□□ -0.33
C4A-258ENST00000496659 MCM10Q7L590 875 aa12.98□□□□□ -0.33
C4A-258ENST00000496659 IFT57Q9NWB7 429 aa12.98□□□□□ -0.33
C4A-258ENST00000496659 MRC1P22897 1456 aa12.97□□□□□ -0.33
C4A-258ENST00000496659 CYP27B1O15528 508 aa12.97□□□□□ -0.33
C4A-258ENST00000496659 RNMTO43148 476 aaKnown RBP12.97□□□□□ -0.33
C4A-258ENST00000496659 FAM196AQ6ZSG2 479 aa12.97□□□□□ -0.33
C4A-258ENST00000496659 BABAM1Q9NWV8 329 aa12.97□□□□□ -0.33
C4A-258ENST00000496659 TNS1Q9HBL0 1735 aaKnown RBP12.96□□□□□ -0.33
C4A-258ENST00000496659 DCTN1Q14203 1278 aa12.96□□□□□ -0.33
C4A-258ENST00000496659 NKX1-1Q15270 411 aaPredicted RBP12.96□□□□□ -0.33
C4A-258ENST00000496659 MPRIPQ6WCQ1 1025 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms