RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 NPC1L1Q9UHC9 1359 aa24.93■■□□□ 1.58
COPS6-210ENST00000496358 SHANK3Q9BYB0 1731 aa24.92■■□□□ 1.58
COPS6-210ENST00000496358 ZEB1P37275 1124 aaPredicted RBP24.92■■□□□ 1.58
COPS6-210ENST00000496358 CAMKK2Q96RR4 588 aa24.92■■□□□ 1.58
COPS6-210ENST00000496358 PTF1AQ7RTS3 328 aa24.91■■□□□ 1.58
COPS6-210ENST00000496358 ACSBG1Q96GR2 724 aa24.91■■□□□ 1.58
COPS6-210ENST00000496358 PARD3Q8TEW0 1356 aa24.9■■□□□ 1.58
COPS6-210ENST00000496358 NCAPD2Q15021 1401 aa24.89■■□□□ 1.58
COPS6-210ENST00000496358 NHSQ6T4R5 1651 aa24.89■■□□□ 1.58
COPS6-210ENST00000496358 KCNQ2O43526 872 aa24.88■■□□□ 1.57
COPS6-210ENST00000496358 MTHFSP49914 203 aa24.88■■□□□ 1.57
COPS6-210ENST00000496358 PLSCR1O15162 318 aa24.86■■□□□ 1.57
COPS6-210ENST00000496358 RGPD3A6NKT7 1758 aaPredicted RBP24.85■■□□□ 1.57
COPS6-210ENST00000496358 RGPD4Q7Z3J3 1758 aa24.85■■□□□ 1.57
COPS6-210ENST00000496358 RREB1Q92766 1687 aa24.85■■□□□ 1.57
COPS6-210ENST00000496358 IGSF1Q8N6C5 1336 aa24.85■■□□□ 1.57
COPS6-210ENST00000496358 PCDH11XQ9BZA7 1347 aa24.85■■□□□ 1.57
COPS6-210ENST00000496358 PCDH11YQ9BZA8 1340 aa24.85■■□□□ 1.57
COPS6-210ENST00000496358 PKD1L3Q7Z443 1732 aa24.84■■□□□ 1.57
COPS6-210ENST00000496358 SPG7Q9UQ90 795 aa24.83■■□□□ 1.57
COPS6-210ENST00000496358 BTAF1O14981 1849 aa24.83■■□□□ 1.57
COPS6-210ENST00000496358 DOT1LQ8TEK3 1739 aa24.83■■□□□ 1.57
COPS6-210ENST00000496358 NUP188Q5SRE5 1749 aa24.81■■□□□ 1.56
COPS6-210ENST00000496358 IL13P35225 146 aa24.81■■□□□ 1.56
COPS6-210ENST00000496358 SYTL4Q96C24 671 aaPredicted RBP24.81■■□□□ 1.56
COPS6-210ENST00000496358 CYP27B1O15528 508 aa24.79■■□□□ 1.56
COPS6-210ENST00000496358 PRIM1P49642 420 aaKnown RBP24.79■■□□□ 1.56
COPS6-210ENST00000496358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.79■■□□□ 1.567e-6■■□□□ 12.8
COPS6-210ENST00000496358 NBPF14Q5TI25 921 aa24.78■■□□□ 1.56
COPS6-210ENST00000496358 PSDA5PKW4 1024 aaPredicted RBP24.77■■□□□ 1.56
COPS6-210ENST00000496358 DIAPH1O60610 1272 aaKnown RBP24.77■■□□□ 1.56
COPS6-210ENST00000496358 SULT6B1Q6IMI4 303 aa24.77■■□□□ 1.56
COPS6-210ENST00000496358 AEBP1Q8IUX7 1158 aa24.76■■□□□ 1.55
COPS6-210ENST00000496358 R3HDM1Q15032 1099 aaKnown RBP24.75■■□□□ 1.55
COPS6-210ENST00000496358 TXNRD1Q16881 649 aa24.75■■□□□ 1.55
COPS6-210ENST00000496358 PROM2Q8N271 834 aa24.75■■□□□ 1.55
COPS6-210ENST00000496358 PLEKHG2Q9H7P9 1386 aa24.75■■□□□ 1.55
COPS6-210ENST00000496358 PLEKHO1Q53GL0 409 aaPredicted RBP24.74■■□□□ 1.55
COPS6-210ENST00000496358 LRP5O75197 1615 aa24.73■■□□□ 1.55
COPS6-210ENST00000496358 DDX10Q13206 875 aaKnown RBP24.73■■□□□ 1.55
COPS6-210ENST00000496358 IFNL2Q8IZJ0 200 aa24.73■■□□□ 1.55
COPS6-210ENST00000496358 PPP2R1AP30153 589 aa24.72■■□□□ 1.55
COPS6-210ENST00000496358 NKX1-1Q15270 411 aaPredicted RBP24.72■■□□□ 1.55
COPS6-210ENST00000496358 ITGB4P16144 1822 aa24.72■■□□□ 1.55
COPS6-210ENST00000496358 KDRP35968 1356 aa24.71■■□□□ 1.55
COPS6-210ENST00000496358 PHKG2P15735 406 aa24.71■■□□□ 1.55
COPS6-210ENST00000496358 AMOTQ4VCS5 1084 aa24.71■■□□□ 1.55
COPS6-210ENST00000496358 CFAP53Q96M91 514 aa24.71■■□□□ 1.55
COPS6-210ENST00000496358 TOGARAM1Q9Y4F4 1720 aa24.7■■□□□ 1.54
COPS6-210ENST00000496358 HMOX1P09601 288 aa24.7■■□□□ 1.54
COPS6-210ENST00000496358 COL3A1P02461 1466 aaPredicted RBP24.7■■□□□ 1.54
COPS6-210ENST00000496358 MPRIPQ6WCQ1 1025 aa24.69■■□□□ 1.54
COPS6-210ENST00000496358 U2SURPO15042 1029 aaKnown RBP24.68■■□□□ 1.54
COPS6-210ENST00000496358 ZNF530Q6P9A1 599 aaPredicted RBP24.68■■□□□ 1.54
COPS6-210ENST00000496358 LY75O60449 1722 aa24.65■■□□□ 1.54
COPS6-210ENST00000496358 HSP90AB1P08238 724 aaKnown RBP24.65■■□□□ 1.54
COPS6-210ENST00000496358 ANO8Q9HCE9 1232 aaPredicted RBP24.65■■□□□ 1.54
COPS6-210ENST00000496358 C1orf141Q5JVX7 400 aa24.64■■□□□ 1.54
COPS6-210ENST00000496358 STK32BQ9NY57 414 aa24.64■■□□□ 1.54
COPS6-210ENST00000496358 SLC27A3Q5K4L6 730 aa24.63■■□□□ 1.53
COPS6-210ENST00000496358 NUDCQ9Y266 331 aa24.63■■□□□ 1.53
COPS6-210ENST00000496358 PIGBQ92521 554 aa24.62■■□□□ 1.53
COPS6-210ENST00000496358 DCAF5Q96JK2 942 aa24.62■■□□□ 1.53
COPS6-210ENST00000496358 LRRC4BQ9NT99 713 aa24.62■■□□□ 1.53
COPS6-210ENST00000496358 TMOD3Q9NYL9 352 aa24.62■■□□□ 1.53
COPS6-210ENST00000496358 RALBP1Q15311 655 aa24.59■■□□□ 1.53
COPS6-210ENST00000496358 SLC15A2Q16348 729 aa24.59■■□□□ 1.53
COPS6-210ENST00000496358 SMARCC1Q92922 1105 aaPredicted RBP24.59■■□□□ 1.53
COPS6-210ENST00000496358 CCNL1Q9UK58 526 aaPredicted RBP24.59■■□□□ 1.53
COPS6-210ENST00000496358 PALLDQ8WX93 1383 aa24.58■■□□□ 1.53
COPS6-210ENST00000496358 ERVV-2B6SEH9 535 aa24.58■■□□□ 1.53
COPS6-210ENST00000496358 KCNQ4P56696 695 aa24.58■■□□□ 1.53
COPS6-210ENST00000496358 PAPPAQ13219 1627 aa24.57■■□□□ 1.52
COPS6-210ENST00000496358 AKAP4Q5JQC9 854 aa24.57■■□□□ 1.52
COPS6-210ENST00000496358 KDM6AO15550 1401 aaPredicted RBP24.56■■□□□ 1.52
COPS6-210ENST00000496358 SCN11AQ9UI33 1791 aa24.55■■□□□ 1.52
COPS6-210ENST00000496358 U2AF1L5P0DN76 240 aaPredicted RBP24.55■■□□□ 1.52
COPS6-210ENST00000496358 CABP4P57796 275 aa24.55■■□□□ 1.52
COPS6-210ENST00000496358 U2AF1Q01081 240 aaKnown RBP eCLIP24.55■■□□□ 1.52
COPS6-210ENST00000496358 MTHFSDQ2M296 383 aaKnown RBP24.55■■□□□ 1.52
COPS6-210ENST00000496358 VIRMAQ69YN4 1812 aaKnown RBP24.55■■□□□ 1.52
COPS6-210ENST00000496358 ASAP1Q9ULH1 1129 aa24.53■■□□□ 1.52
COPS6-210ENST00000496358 PRKAR2BP31323 418 aa24.52■■□□□ 1.52
COPS6-210ENST00000496358 ZNF827Q17R98 1081 aa24.52■■□□□ 1.52
COPS6-210ENST00000496358 CASZ1Q86V15 1759 aa24.52■■□□□ 1.52
COPS6-210ENST00000496358 TAF1LQ8IZX4 1826 aa24.51■■□□□ 1.51
COPS6-210ENST00000496358 C5P01031 1676 aa24.51■■□□□ 1.51
COPS6-210ENST00000496358 ZNF316A6NFI3 1004 aaPredicted RBP24.51■■□□□ 1.51
COPS6-210ENST00000496358 HMGB2P26583 209 aaKnown RBP24.51■■□□□ 1.51
COPS6-210ENST00000496358 AKT1S1Q96B36 256 aa24.51■■□□□ 1.51
COPS6-210ENST00000496358 RSPH6AQ9H0K4 717 aa24.51■■□□□ 1.51
COPS6-210ENST00000496358 GAS2L2Q8NHY3 880 aa24.5■■□□□ 1.51
COPS6-210ENST00000496358 ATG3Q9NT62 314 aa24.5■■□□□ 1.51
COPS6-210ENST00000496358 FCHSD2O94868 740 aa24.49■■□□□ 1.51
COPS6-210ENST00000496358 NFATC2IPQ8NCF5 419 aa24.49■■□□□ 1.51
COPS6-210ENST00000496358 PDGFDQ9GZP0 370 aaPredicted RBP24.49■■□□□ 1.51
COPS6-210ENST00000496358 LGR6Q9HBX8 967 aa24.49■■□□□ 1.51
COPS6-210ENST00000496358 RNMTO43148 476 aaKnown RBP24.48■■□□□ 1.51
COPS6-210ENST00000496358 TFCP2L1Q9NZI6 479 aa24.48■■□□□ 1.51
COPS6-210ENST00000496358 QSER1Q2KHR3 1735 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms