RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 HSPA1LP34931 641 aa11.84□□□□□ -0.51
GAPVD1-219ENST00000495955 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
GAPVD1-219ENST00000495955 TULP4Q9NRJ4 1543 aa11.84□□□□□ -0.51
GAPVD1-219ENST00000495955 HSP90AA1P07900 732 aaKnown RBP11.84□□□□□ -0.51
GAPVD1-219ENST00000495955 IL13P35225 146 aa11.84□□□□□ -0.51
GAPVD1-219ENST00000495955 TRPC5Q9UL62 973 aaPredicted RBP11.84□□□□□ -0.51
GAPVD1-219ENST00000495955 NPC1L1Q9UHC9 1359 aa11.84□□□□□ -0.51
GAPVD1-219ENST00000495955 ZNF772Q68DY9 489 aaPredicted RBP11.84□□□□□ -0.51
GAPVD1-219ENST00000495955 DDX19BQ9UMR2 479 aa11.83□□□□□ -0.52
GAPVD1-219ENST00000495955 AK7Q96M32 723 aa11.83□□□□□ -0.52
GAPVD1-219ENST00000495955 SLIT1O75093 1534 aa11.83□□□□□ -0.52
GAPVD1-219ENST00000495955 ZPR1O75312 459 aa11.83□□□□□ -0.52
GAPVD1-219ENST00000495955 DIP2AQ14689 1571 aa11.83□□□□□ -0.52
GAPVD1-219ENST00000495955 QRICH2Q9H0J4 1663 aa11.82□□□□□ -0.52
GAPVD1-219ENST00000495955 ANP32AP39687 249 aaKnown RBP11.82□□□□□ -0.52
GAPVD1-219ENST00000495955 SLC39A6Q13433 755 aa11.82□□□□□ -0.52
GAPVD1-219ENST00000495955 ARHGEF25Q86VW2 580 aa11.82□□□□□ -0.52
GAPVD1-219ENST00000495955 NOB1Q9ULX3 412 aaKnown RBP11.82□□□□□ -0.52
GAPVD1-219ENST00000495955 PHF14O94880 888 aa11.82□□□□□ -0.52
GAPVD1-219ENST00000495955 NFATC2IPQ8NCF5 419 aa11.82□□□□□ -0.52
GAPVD1-219ENST00000495955 CRBNQ96SW2 442 aa11.82□□□□□ -0.52
GAPVD1-219ENST00000495955 DCAF5Q96JK2 942 aa11.82□□□□□ -0.52
GAPVD1-219ENST00000495955 PHACTR3Q96KR7 559 aa11.82□□□□□ -0.52
GAPVD1-219ENST00000495955 ATP6V1AP38606 617 aa11.81□□□□□ -0.52
GAPVD1-219ENST00000495955 GPATCH3Q96I76 525 aa11.81□□□□□ -0.52
GAPVD1-219ENST00000495955 DLC1Q96QB1 1528 aa11.81□□□□□ -0.52
GAPVD1-219ENST00000495955 NKTRP30414 1462 aaKnown RBP11.81□□□□□ -0.52
GAPVD1-219ENST00000495955 UBTFL1P0CB47 393 aaPredicted RBP11.81□□□□□ -0.52
GAPVD1-219ENST00000495955 PANK1Q8TE04 598 aa11.81□□□□□ -0.52
GAPVD1-219ENST00000495955 CFAP44Q96MT7 982 aa11.81□□□□□ -0.52
GAPVD1-219ENST00000495955 TNS3Q68CZ2 1445 aa11.81□□□□□ -0.52
GAPVD1-219ENST00000495955 KCNJ4P48050 445 aa11.81□□□□□ -0.52
GAPVD1-219ENST00000495955 CDC42BPGQ6DT37 1551 aa11.81□□□□□ -0.52
GAPVD1-219ENST00000495955 RSPH6AQ9H0K4 717 aa11.81□□□□□ -0.52
GAPVD1-219ENST00000495955 RXRBP28702 533 aa11.8□□□□□ -0.52
GAPVD1-219ENST00000495955 SLFN5Q08AF3 891 aa11.8□□□□□ -0.52
GAPVD1-219ENST00000495955 SMARCC1Q92922 1105 aaPredicted RBP11.8□□□□□ -0.52
GAPVD1-219ENST00000495955 MAP3K5Q99683 1374 aa11.8□□□□□ -0.52
GAPVD1-219ENST00000495955 BCAR3O75815 825 aa11.8□□□□□ -0.52
GAPVD1-219ENST00000495955 TEX13AQ9BXU3 409 aaPredicted RBP11.8□□□□□ -0.52
GAPVD1-219ENST00000495955 ARHGAP23Q9P227 1491 aa11.8□□□□□ -0.52
GAPVD1-219ENST00000495955 UNC5CLQ8IV45 518 aa11.79□□□□□ -0.52
GAPVD1-219ENST00000495955 HSP90B1P14625 803 aaKnown RBP11.79□□□□□ -0.52
GAPVD1-219ENST00000495955 FANCIQ9NVI1 1328 aa11.79□□□□□ -0.52
GAPVD1-219ENST00000495955 HTATSF1O43719 755 aaKnown RBP11.79□□□□□ -0.52
GAPVD1-219ENST00000495955 CT47B1P0C2W7 299 aaPredicted RBP11.79□□□□□ -0.52
GAPVD1-219ENST00000495955 MBIPQ9NS73 344 aa11.79□□□□□ -0.52
GAPVD1-219ENST00000495955 JCADQ9P266 1359 aa11.79□□□□□ -0.52
GAPVD1-219ENST00000495955 NRXN1Q9ULB1 1477 aa11.79□□□□□ -0.52
GAPVD1-219ENST00000495955 SNRPA1P09661 255 aaKnown RBP11.79□□□□□ -0.52
GAPVD1-219ENST00000495955 EXOC6Q8TAG9 804 aa11.79□□□□□ -0.52
GAPVD1-219ENST00000495955 ZNF652Q9Y2D9 606 aa11.79□□□□□ -0.52
GAPVD1-219ENST00000495955 INSRP06213 1382 aa11.78□□□□□ -0.52
GAPVD1-219ENST00000495955 RNMTO43148 476 aaKnown RBP11.78□□□□□ -0.52
GAPVD1-219ENST00000495955 PPLO60437 1756 aa11.78□□□□□ -0.52
GAPVD1-219ENST00000495955 AFF2P51816 1311 aa11.78□□□□□ -0.52
GAPVD1-219ENST00000495955 DCAF8L1A6NGE4 600 aa11.78□□□□□ -0.52
GAPVD1-219ENST00000495955 G3BP1Q13283 466 aaKnown RBP eCLIP11.77□□□□□ -0.52
GAPVD1-219ENST00000495955 SRCIN1Q9C0H9 1055 aa11.77□□□□□ -0.52
GAPVD1-219ENST00000495955 IQGAP1P46940 1657 aa11.77□□□□□ -0.53
GAPVD1-219ENST00000495955 PRIM1P49642 420 aaKnown RBP11.77□□□□□ -0.53
GAPVD1-219ENST00000495955 VPS37DQ86XT2 251 aa11.77□□□□□ -0.53
GAPVD1-219ENST00000495955 FBXW7Q969H0 707 aa11.77□□□□□ -0.53
GAPVD1-219ENST00000495955 WDR17Q8IZU2 1322 aa11.76□□□□□ -0.53
GAPVD1-219ENST00000495955 UBR1Q8IWV7 1749 aa11.76□□□□□ -0.53
GAPVD1-219ENST00000495955 CARD10Q9BWT7 1032 aa11.76□□□□□ -0.53
GAPVD1-219ENST00000495955 AATKQ6ZMQ8 1374 aa11.76□□□□□ -0.53
GAPVD1-219ENST00000495955 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
GAPVD1-219ENST00000495955 GNAI3P08754 354 aa11.76□□□□□ -0.53
GAPVD1-219ENST00000495955 RFC4P35249 363 aa11.76□□□□□ -0.53
GAPVD1-219ENST00000495955 DBF4Q9UBU7 674 aaPredicted RBP11.76□□□□□ -0.53
GAPVD1-219ENST00000495955 ANKRD45Q5TZF3 282 aa11.76□□□□□ -0.53
GAPVD1-219ENST00000495955 NCOA3Q9Y6Q9 1424 aa11.76□□□□□ -0.53
GAPVD1-219ENST00000495955 RTL1A6NKG5 1358 aa11.75□□□□□ -0.53
GAPVD1-219ENST00000495955 CCT4P50991 539 aaKnown RBP11.75□□□□□ -0.53
GAPVD1-219ENST00000495955 ZBTB3Q9H5J0 574 aa11.75□□□□□ -0.53
GAPVD1-219ENST00000495955 SIGLEC1Q9BZZ2 1709 aa11.75□□□□□ -0.53
GAPVD1-219ENST00000495955 TECPR2O15040 1411 aa11.75□□□□□ -0.53
GAPVD1-219ENST00000495955 HYPKQ9NX55 129 aa11.75□□□□□ -0.53
GAPVD1-219ENST00000495955 EIF5BO60841 1220 aaKnown RBP11.74□□□□□ -0.53
GAPVD1-219ENST00000495955 CPS1P31327 1500 aa11.74□□□□□ -0.53
GAPVD1-219ENST00000495955 MYD88Q99836 296 aa11.74□□□□□ -0.53
GAPVD1-219ENST00000495955 LGR6Q9HBX8 967 aa11.74□□□□□ -0.53
GAPVD1-219ENST00000495955 ERBB3P21860 1342 aa11.74□□□□□ -0.53
GAPVD1-219ENST00000495955 APBA3O96018 575 aa11.74□□□□□ -0.53
GAPVD1-219ENST00000495955 TFCP2L1Q9NZI6 479 aa11.74□□□□□ -0.53
GAPVD1-219ENST00000495955 ERICH6BQ5W0A0 696 aa11.73□□□□□ -0.53
GAPVD1-219ENST00000495955 ATF7IPQ6VMQ6 1270 aa11.73□□□□□ -0.53
GAPVD1-219ENST00000495955 KAT6BQ8WYB5 2073 aa11.73□□□□□ -0.53
GAPVD1-219ENST00000495955 NEURL4Q96JN8 1562 aa11.73□□□□□ -0.53
GAPVD1-219ENST00000495955 ANXA1P04083 346 aa11.73□□□□□ -0.53
GAPVD1-219ENST00000495955 FAM182BQ5T319 152 aa11.73□□□□□ -0.53
GAPVD1-219ENST00000495955 PIP4K2AP48426 406 aaPredicted RBP11.73□□□□□ -0.53
GAPVD1-219ENST00000495955 NBPF14Q5TI25 921 aa11.73□□□□□ -0.53
GAPVD1-219ENST00000495955 CCNL1Q9UK58 526 aaPredicted RBP11.73□□□□□ -0.53
GAPVD1-219ENST00000495955 IL16Q14005 1332 aa11.73□□□□□ -0.53
GAPVD1-219ENST00000495955 SPATA31A6Q5VVP1 1343 aa11.73□□□□□ -0.53
GAPVD1-219ENST00000495955 ADGRB1O14514 1584 aa11.73□□□□□ -0.53
GAPVD1-219ENST00000495955 C1orf115Q9H7X2 142 aa11.73□□□□□ -0.53
GAPVD1-219ENST00000495955 IFIT2P09913 472 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms