RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
GARNL3-219ENST00000495172 AMIGO3Q86WK7 504 aa13.44□□□□□ -0.26
GARNL3-219ENST00000495172 ABHD8Q96I13 439 aa13.44□□□□□ -0.26
GARNL3-219ENST00000495172 ERBB3P21860 1342 aa13.43□□□□□ -0.26
GARNL3-219ENST00000495172 NLRP6P59044 892 aa13.43□□□□□ -0.26
GARNL3-219ENST00000495172 SYTL4Q96C24 671 aaPredicted RBP13.43□□□□□ -0.26
GARNL3-219ENST00000495172 CDK19Q9BWU1 502 aa13.43□□□□□ -0.26
GARNL3-219ENST00000495172 SLIT3O75094 1523 aa13.43□□□□□ -0.26
GARNL3-219ENST00000495172 C9orf131Q5VYM1 1079 aa13.42□□□□□ -0.26
GARNL3-219ENST00000495172 MKRN1Q9UHC7 482 aaKnown RBP13.42□□□□□ -0.26
GARNL3-219ENST00000495172 BCS1LQ9Y276 419 aa13.42□□□□□ -0.26
GARNL3-219ENST00000495172 CPSF1Q10570 1443 aaKnown RBP13.41□□□□□ -0.26
GARNL3-219ENST00000495172 CCNL1Q9UK58 526 aaPredicted RBP13.41□□□□□ -0.26
GARNL3-219ENST00000495172 PKD1L3Q7Z443 1732 aa13.41□□□□□ -0.26
GARNL3-219ENST00000495172 KIAA1551Q9HCM1 1747 aa13.41□□□□□ -0.26
GARNL3-219ENST00000495172 QRICH2Q9H0J4 1663 aa13.4□□□□□ -0.26
GARNL3-219ENST00000495172 PRIM1P49642 420 aaKnown RBP13.4□□□□□ -0.26
GARNL3-219ENST00000495172 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
GARNL3-219ENST00000495172 CCDC85CA6NKD9 419 aa13.39□□□□□ -0.27
GARNL3-219ENST00000495172 SMC1BQ8NDV3 1235 aa13.39□□□□□ -0.27
GARNL3-219ENST00000495172 DDX54Q8TDD1 881 aaKnown RBP13.39□□□□□ -0.27
GARNL3-219ENST00000495172 NSD2O96028 1365 aa13.39□□□□□ -0.27
GARNL3-219ENST00000495172 USP54Q70EL1 1684 aa13.39□□□□□ -0.27
GARNL3-219ENST00000495172 PXDNLA1KZ92 1463 aa13.38□□□□□ -0.27
GARNL3-219ENST00000495172 A0A0G2JLW4 131 aa13.38□□□□□ -0.27
GARNL3-219ENST00000495172 PLEKHG3A1L390 1219 aa13.38□□□□□ -0.27
GARNL3-219ENST00000495172 LBX1P52954 281 aa13.38□□□□□ -0.27
GARNL3-219ENST00000495172 ARHGEF25Q86VW2 580 aa13.38□□□□□ -0.27
GARNL3-219ENST00000495172 PPARGC1BQ86YN6 1023 aaKnown RBP13.38□□□□□ -0.27
GARNL3-219ENST00000495172 PDE4DIPQ5VU43 2346 aa13.38□□□□□ -0.27
GARNL3-219ENST00000495172 TOGARAM1Q9Y4F4 1720 aa13.37□□□□□ -0.27
GARNL3-219ENST00000495172 PRDM10Q9NQV6 1147 aa13.37□□□□□ -0.27
GARNL3-219ENST00000495172 CCDC61Q9Y6R9 512 aa13.37□□□□□ -0.27
GARNL3-219ENST00000495172 CCDC7Q96M83 1385 aa13.36□□□□□ -0.27
GARNL3-219ENST00000495172 PHF14O94880 888 aa13.36□□□□□ -0.27
GARNL3-219ENST00000495172 RNF216Q9NWF9 866 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-219ENST00000495172 NLRP2Q9NX02 1062 aa13.36□□□□□ -0.27
GARNL3-219ENST00000495172 C5P01031 1676 aa13.36□□□□□ -0.27
GARNL3-219ENST00000495172 TNRC6CQ9HCJ0 1690 aaKnown RBP13.35□□□□□ -0.27
GARNL3-219ENST00000495172 NPM3O75607 178 aaKnown RBP13.35□□□□□ -0.27
GARNL3-219ENST00000495172 IL2RBP14784 551 aa13.34□□□□□ -0.27
GARNL3-219ENST00000495172 HOXD11P31277 338 aaPredicted RBP13.33□□□□□ -0.28
GARNL3-219ENST00000495172 RNF181Q9P0P0 153 aa13.33□□□□□ -0.28
GARNL3-219ENST00000495172 KDM2BQ8NHM5 1336 aa13.33□□□□□ -0.28
GARNL3-219ENST00000495172 TAF1LQ8IZX4 1826 aa13.32□□□□□ -0.28
GARNL3-219ENST00000495172 FCHSD2O94868 740 aa13.32□□□□□ -0.28
GARNL3-219ENST00000495172 RGS19P49795 217 aa13.32□□□□□ -0.28
GARNL3-219ENST00000495172 C10orf71Q711Q0 1435 aa13.31□□□□□ -0.28
GARNL3-219ENST00000495172 CTCFP49711 727 aaPredicted RBP13.31□□□□□ -0.28
GARNL3-219ENST00000495172 CFAP44Q96MT7 982 aa13.31□□□□□ -0.28
GARNL3-219ENST00000495172 DPEP1P16444 411 aa13.3□□□□□ -0.28
GARNL3-219ENST00000495172 CABP2Q9NPB3 220 aa13.3□□□□□ -0.28
GARNL3-219ENST00000495172 KDM2AQ9Y2K7 1162 aa13.3□□□□□ -0.28
GARNL3-219ENST00000495172 ANKRD36BQ8N2N9 1353 aa13.3□□□□□ -0.28
GARNL3-219ENST00000495172 PLEKHG2Q9H7P9 1386 aa13.3□□□□□ -0.28
GARNL3-219ENST00000495172 BRCA1P38398 1863 aaKnown RBP13.29□□□□□ -0.28
GARNL3-219ENST00000495172 NFAT5O94916 1531 aa13.29□□□□□ -0.28
GARNL3-219ENST00000495172 KIF13BQ9NQT8 1826 aa13.29□□□□□ -0.28
GARNL3-219ENST00000495172 SBF1O95248 1867 aa13.29□□□□□ -0.28
GARNL3-219ENST00000495172 UBR3Q6ZT12 1888 aa13.29□□□□□ -0.28
GARNL3-219ENST00000495172 HSPA8P11142 646 aaKnown RBP13.28□□□□□ -0.28
GARNL3-219ENST00000495172 C4BP0C0L5 1744 aa13.27□□□□□ -0.28
GARNL3-219ENST00000495172 AIDAQ96BJ3 306 aa13.27□□□□□ -0.29
GARNL3-219ENST00000495172 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.26□□□□□ -0.29
GARNL3-219ENST00000495172 MMP10P09238 476 aa13.26□□□□□ -0.29
GARNL3-219ENST00000495172 CABP1Q9NZU7 370 aa13.26□□□□□ -0.29
GARNL3-219ENST00000495172 USP47Q96K76 1375 aa13.25□□□□□ -0.29
GARNL3-219ENST00000495172 VEGFBP49765 207 aa13.25□□□□□ -0.29
GARNL3-219ENST00000495172 SRPK2P78362 688 aaKnown RBP13.25□□□□□ -0.29
GARNL3-219ENST00000495172 ARFGEF1Q9Y6D6 1849 aa13.25□□□□□ -0.29
GARNL3-219ENST00000495172 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
GARNL3-219ENST00000495172 POTEJP0CG39 1038 aa13.24□□□□□ -0.29
GARNL3-219ENST00000495172 KCNA3P22001 575 aa13.24□□□□□ -0.29
GARNL3-219ENST00000495172 RASSF7Q02833 373 aa13.24□□□□□ -0.29
GARNL3-219ENST00000495172 ANKRD24Q8TF21 1146 aa13.24□□□□□ -0.29
GARNL3-219ENST00000495172 AK7Q96M32 723 aa13.24□□□□□ -0.29
GARNL3-219ENST00000495172 WBP1LQ9NX94 342 aa13.24□□□□□ -0.29
GARNL3-219ENST00000495172 CNTNAP1P78357 1384 aa13.23□□□□□ -0.29
GARNL3-219ENST00000495172 VIRMAQ69YN4 1812 aaKnown RBP13.23□□□□□ -0.29
GARNL3-219ENST00000495172 POTECB2RU33 542 aa13.23□□□□□ -0.29
GARNL3-219ENST00000495172 FLAD1Q8NFF5 587 aa13.23□□□□□ -0.29
GARNL3-219ENST00000495172 MPHOSPH9Q99550 1183 aa13.23□□□□□ -0.29
GARNL3-219ENST00000495172 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
GARNL3-219ENST00000495172 LTN1O94822 1766 aa13.22□□□□□ -0.29
GARNL3-219ENST00000495172 VEGFAP15692 232 aaPredicted RBP13.21□□□□□ -0.29
GARNL3-219ENST00000495172 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.29
GARNL3-219ENST00000495172 TTC21BQ7Z4L5 1316 aa13.2□□□□□ -0.3
GARNL3-219ENST00000495172 TGFB2P61812 414 aa13.2□□□□□ -0.3
GARNL3-219ENST00000495172 KCNH5Q8NCM2 988 aa13.2□□□□□ -0.3
GARNL3-219ENST00000495172 TSKSQ9UJT2 592 aa13.2□□□□□ -0.3
GARNL3-219ENST00000495172 PALLDQ8WX93 1383 aa13.2□□□□□ -0.3
GARNL3-219ENST00000495172 DCAF5Q96JK2 942 aa13.19□□□□□ -0.3
GARNL3-219ENST00000495172 RGPD2P0DJD1 1756 aa13.19□□□□□ -0.3
GARNL3-219ENST00000495172 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
GARNL3-219ENST00000495172 CCDC88AQ3V6T2 1871 aa13.18□□□□□ -0.3
GARNL3-219ENST00000495172 TIAM2Q8IVF5 1701 aa13.17□□□□□ -0.3
GARNL3-219ENST00000495172 GLTPD2A6NH11 291 aa13.17□□□□□ -0.3
GARNL3-219ENST00000495172 CHRNA5P30532 468 aa13.17□□□□□ -0.3
GARNL3-219ENST00000495172 DCAF11Q8TEB1 546 aa13.17□□□□□ -0.3
GARNL3-219ENST00000495172 MEGF6O75095 1541 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms