RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 TNNT2P45379 298 aaPredicted RBP14.68□□□□□ -0.06
NELFE-213ENST00000494956 CNKSR2Q8WXI2 1034 aa14.68□□□□□ -0.06
NELFE-213ENST00000494956 ANO8Q9HCE9 1232 aaPredicted RBP14.68□□□□□ -0.06
NELFE-213ENST00000494956 CGNL1Q0VF96 1302 aa14.67□□□□□ -0.06
NELFE-213ENST00000494956 PLSCR1O15162 318 aa14.67□□□□□ -0.06
NELFE-213ENST00000494956 FLT4P35916 1363 aa14.67□□□□□ -0.06
NELFE-213ENST00000494956 DOT1LQ8TEK3 1739 aa14.66□□□□□ -0.06
NELFE-213ENST00000494956 INSRP06213 1382 aa14.66□□□□□ -0.06
NELFE-213ENST00000494956 SRCAPQ6ZRS2 3230 aa14.66□□□□□ -0.06
NELFE-213ENST00000494956 TXNRD1Q16881 649 aa14.65□□□□□ -0.06
NELFE-213ENST00000494956 NBPF14Q5TI25 921 aa14.65□□□□□ -0.06
NELFE-213ENST00000494956 POLKQ9UBT6 870 aa14.65□□□□□ -0.06
NELFE-213ENST00000494956 ZCRB1Q8TBF4 217 aaKnown RBP14.64□□□□□ -0.07
NELFE-213ENST00000494956 PDGFDQ9GZP0 370 aaPredicted RBP14.64□□□□□ -0.07
NELFE-213ENST00000494956 SMG6Q86US8 1419 aaKnown RBP14.64□□□□□ -0.07
NELFE-213ENST00000494956 KIF7Q2M1P5 1343 aa14.64□□□□□ -0.07
NELFE-213ENST00000494956 SYTL4Q96C24 671 aaPredicted RBP14.62□□□□□ -0.07
NELFE-213ENST00000494956 KIF24Q5T7B8 1368 aa14.61□□□□□ -0.07
NELFE-213ENST00000494956 PRIM1P49642 420 aaKnown RBP14.61□□□□□ -0.07
NELFE-213ENST00000494956 KCNQ4P56696 695 aa14.61□□□□□ -0.07
NELFE-213ENST00000494956 RAPGEF4Q8WZA2 1011 aa14.61□□□□□ -0.07
NELFE-213ENST00000494956 WASHC2AQ641Q2 1341 aa14.61□□□□□ -0.07
NELFE-213ENST00000494956 CASZ1Q86V15 1759 aa14.6□□□□□ -0.07
NELFE-213ENST00000494956 TATP17735 454 aaPredicted RBP14.6□□□□□ -0.07
NELFE-213ENST00000494956 EYA1Q99502 592 aa14.6□□□□□ -0.07
NELFE-213ENST00000494956 NSD2O96028 1365 aa14.6□□□□□ -0.07
NELFE-213ENST00000494956 LRRC4BQ9NT99 713 aa14.59□□□□□ -0.07
NELFE-213ENST00000494956 PKD1L3Q7Z443 1732 aa14.58□□□□□ -0.07
NELFE-213ENST00000494956 TOGARAM1Q9Y4F4 1720 aa14.58□□□□□ -0.07
NELFE-213ENST00000494956 EIF4A2Q14240 407 aaKnown RBP14.58□□□□□ -0.08
NELFE-213ENST00000494956 PAPPAQ13219 1627 aa14.58□□□□□ -0.08
NELFE-213ENST00000494956 CYP27B1O15528 508 aa14.57□□□□□ -0.08
NELFE-213ENST00000494956 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
NELFE-213ENST00000494956 ZNF827Q17R98 1081 aa14.57□□□□□ -0.08
NELFE-213ENST00000494956 MORC1Q86VD1 984 aa14.57□□□□□ -0.08
NELFE-213ENST00000494956 NCAPD2Q15021 1401 aa14.57□□□□□ -0.08
NELFE-213ENST00000494956 LY75O60449 1722 aa14.56□□□□□ -0.08
NELFE-213ENST00000494956 ZBTB7AO95365 584 aa14.56□□□□□ -0.08
NELFE-213ENST00000494956 CNGB1Q14028 1251 aaPredicted RBP14.56□□□□□ -0.08
NELFE-213ENST00000494956 SLC15A2Q16348 729 aa14.56□□□□□ -0.08
NELFE-213ENST00000494956 STK32BQ9NY57 414 aa14.56□□□□□ -0.08
NELFE-213ENST00000494956 KNSTRNQ9Y448 316 aa14.56□□□□□ -0.08
NELFE-213ENST00000494956 ITGB4P16144 1822 aa14.56□□□□□ -0.08
NELFE-213ENST00000494956 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
NELFE-213ENST00000494956 PCDH11XQ9BZA7 1347 aa14.55□□□□□ -0.08
NELFE-213ENST00000494956 PCDH11YQ9BZA8 1340 aa14.55□□□□□ -0.08
NELFE-213ENST00000494956 TUBGCP6Q96RT7 1819 aa14.55□□□□□ -0.08
NELFE-213ENST00000494956 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
NELFE-213ENST00000494956 SPON1Q9HCB6 807 aa14.53□□□□□ -0.08
NELFE-213ENST00000494956 PER1O15534 1290 aaPredicted RBP14.52□□□□□ -0.09
NELFE-213ENST00000494956 CC2D1BQ5T0F9 858 aaKnown RBP14.52□□□□□ -0.09
NELFE-213ENST00000494956 MPRIPQ6WCQ1 1025 aa14.52□□□□□ -0.09
NELFE-213ENST00000494956 IGSF1Q8N6C5 1336 aa14.51□□□□□ -0.09
NELFE-213ENST00000494956 AEBP1Q8IUX7 1158 aa14.51□□□□□ -0.09
NELFE-213ENST00000494956 AKT1S1Q96B36 256 aa14.5□□□□□ -0.09
NELFE-213ENST00000494956 PPP1R1BQ9UD71 204 aaPredicted RBP14.49□□□□□ -0.09
NELFE-213ENST00000494956 CCNL1Q9UK58 526 aaPredicted RBP14.49□□□□□ -0.09
NELFE-213ENST00000494956 SPG7Q9UQ90 795 aa14.49□□□□□ -0.09
NELFE-213ENST00000494956 TAF1LQ8IZX4 1826 aa14.48□□□□□ -0.09
NELFE-213ENST00000494956 PHKG2P15735 406 aa14.48□□□□□ -0.09
NELFE-213ENST00000494956 PTGER2P43116 358 aa14.48□□□□□ -0.09
NELFE-213ENST00000494956 SLC27A3Q5K4L6 730 aa14.48□□□□□ -0.09
NELFE-213ENST00000494956 PIGBQ92521 554 aa14.48□□□□□ -0.09
NELFE-213ENST00000494956 C5P01031 1676 aa14.47□□□□□ -0.09
NELFE-213ENST00000494956 MTHFSP49914 203 aa14.47□□□□□ -0.09
NELFE-213ENST00000494956 NKX1-1Q15270 411 aaPredicted RBP14.47□□□□□ -0.09
NELFE-213ENST00000494956 PALLDQ8WX93 1383 aa14.47□□□□□ -0.09
NELFE-213ENST00000494956 QSER1Q2KHR3 1735 aa14.46□□□□□ -0.09
NELFE-213ENST00000494956 PNPLA7Q6ZV29 1317 aa14.46□□□□□ -0.09
NELFE-213ENST00000494956 IL13P35225 146 aa14.46□□□□□ -0.09
NELFE-213ENST00000494956 MAPK8IP2Q13387 824 aaPredicted RBP14.46□□□□□ -0.09
NELFE-213ENST00000494956 SULT6B1Q6IMI4 303 aa14.45□□□□□ -0.1
NELFE-213ENST00000494956 SMIM5Q71RC9 77 aa14.45□□□□□ -0.1
NELFE-213ENST00000494956 IFNL2Q8IZJ0 200 aa14.45□□□□□ -0.1
NELFE-213ENST00000494956 MTFR1LQ9H019 292 aa14.45□□□□□ -0.1
NELFE-213ENST00000494956 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.45□□□□□ -0.12e-7■■□□□ 13.3
NELFE-213ENST00000494956 TFCP2L1Q9NZI6 479 aa14.45□□□□□ -0.1
NELFE-213ENST00000494956 SGIP1Q9BQI5 828 aa14.44□□□□□ -0.1
NELFE-213ENST00000494956 ASAP1Q9ULH1 1129 aa14.44□□□□□ -0.1
NELFE-213ENST00000494956 HMOX1P09601 288 aa14.43□□□□□ -0.1
NELFE-213ENST00000494956 ZNF530Q6P9A1 599 aaPredicted RBP14.43□□□□□ -0.1
NELFE-213ENST00000494956 KDM6AO15550 1401 aaPredicted RBP14.42□□□□□ -0.1
NELFE-213ENST00000494956 C4BP0C0L5 1744 aa14.42□□□□□ -0.1
NELFE-213ENST00000494956 PLEKHO1Q53GL0 409 aaPredicted RBP14.42□□□□□ -0.1
NELFE-213ENST00000494956 AMIGO3Q86WK7 504 aa14.42□□□□□ -0.1
NELFE-213ENST00000494956 COL23A1Q86Y22 540 aaPredicted RBP14.42□□□□□ -0.1
NELFE-213ENST00000494956 TMOD3Q9NYL9 352 aa14.42□□□□□ -0.1
NELFE-213ENST00000494956 FHDC1Q9C0D6 1143 aaPredicted RBP14.41□□□□□ -0.1
NELFE-213ENST00000494956 VIRMAQ69YN4 1812 aaKnown RBP14.41□□□□□ -0.1
NELFE-213ENST00000494956 KDRP35968 1356 aa14.4□□□□□ -0.1
NELFE-213ENST00000494956 ITPK1Q13572 414 aa14.4□□□□□ -0.1
NELFE-213ENST00000494956 MSL1Q68DK7 614 aa14.4□□□□□ -0.1
NELFE-213ENST00000494956 LINC00116Q8NCU8 138 aa14.4□□□□□ -0.1
NELFE-213ENST00000494956 SMARCC1Q92922 1105 aaPredicted RBP14.4□□□□□ -0.1
NELFE-213ENST00000494956 ATG3Q9NT62 314 aa14.4□□□□□ -0.1
NELFE-213ENST00000494956 UBR3Q6ZT12 1888 aa14.4□□□□□ -0.1
NELFE-213ENST00000494956 COL3A1P02461 1466 aaPredicted RBP14.39□□□□□ -0.11
NELFE-213ENST00000494956 COL24A1Q17RW2 1714 aa14.39□□□□□ -0.11
NELFE-213ENST00000494956 LOC102724428A0A0B4J2F2 783 aa14.39□□□□□ -0.11
NELFE-213ENST00000494956 SIK1P57059 783 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms