RNA–Protein interactions for RNA: ENST00000494867.1

USP34-221, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 795 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-221ENST00000494867 SPDYE2BA6NHP3 402 aa15.55■□□□□ 0.08
USP34-221ENST00000494867 SPDYE6P0CI01 402 aa15.55■□□□□ 0.08
USP34-221ENST00000494867 SPDYE2Q495Y8 402 aa15.55■□□□□ 0.08
USP34-221ENST00000494867 BARGINQ6ZT62 677 aa15.55■□□□□ 0.08
USP34-221ENST00000494867 DISP2A7MBM2 1401 aa15.52■□□□□ 0.08
USP34-221ENST00000494867 USHBP1Q8N6Y0 703 aa15.52■□□□□ 0.08
USP34-221ENST00000494867 ONECUT3O60422 494 aaPredicted RBP15.51■□□□□ 0.07
USP34-221ENST00000494867 MTHFSP49914 203 aa15.51■□□□□ 0.07
USP34-221ENST00000494867 PARD3Q8TEW0 1356 aa15.5■□□□□ 0.07
USP34-221ENST00000494867 EIF4A2Q14240 407 aaKnown RBP15.5■□□□□ 0.07
USP34-221ENST00000494867 KRT27Q7Z3Y8 459 aa15.5■□□□□ 0.07
USP34-221ENST00000494867 TNS2Q63HR2 1409 aa15.5■□□□□ 0.07
USP34-221ENST00000494867 IL2RBP14784 551 aa15.49■□□□□ 0.07
USP34-221ENST00000494867 CACNB1Q02641 598 aaPredicted RBP15.49■□□□□ 0.07
USP34-221ENST00000494867 NBPF6Q5VWK0 638 aa15.49■□□□□ 0.07
USP34-221ENST00000494867 NBPF4Q96M43 638 aa15.49■□□□□ 0.07
USP34-221ENST00000494867 CDCA7Q9BWT1 371 aaPredicted RBP15.49■□□□□ 0.07
USP34-221ENST00000494867 MEGF6O75095 1541 aa15.48■□□□□ 0.07
USP34-221ENST00000494867 PDE3BQ13370 1112 aa15.48■□□□□ 0.07
USP34-221ENST00000494867 DDB1Q16531 1140 aa15.48■□□□□ 0.07
USP34-221ENST00000494867 PPP2R1AP30153 589 aa15.47■□□□□ 0.07
USP34-221ENST00000494867 COL3A1P02461 1466 aaPredicted RBP15.46■□□□□ 0.07
USP34-221ENST00000494867 RGPD1P0DJD0 1748 aa15.46■□□□□ 0.07
USP34-221ENST00000494867 NCAPD2Q15021 1401 aa15.46■□□□□ 0.07
USP34-221ENST00000494867 RAPGEF4Q8WZA2 1011 aa15.46■□□□□ 0.07
USP34-221ENST00000494867 CFAP53Q96M91 514 aa15.46■□□□□ 0.07
USP34-221ENST00000494867 EYA1Q99502 592 aa15.46■□□□□ 0.07
USP34-221ENST00000494867 OVOS2A0A0G2JMS6 1433 aa15.45■□□□□ 0.06
USP34-221ENST00000494867 RALBP1Q15311 655 aa15.45■□□□□ 0.06
USP34-221ENST00000494867 FAM182BQ5T319 152 aa15.45■□□□□ 0.06
USP34-221ENST00000494867 KLHL34Q8N239 644 aa15.45■□□□□ 0.06
USP34-221ENST00000494867 IGSF1Q8N6C5 1336 aa15.44■□□□□ 0.06
USP34-221ENST00000494867 DIAPH1O60610 1272 aaKnown RBP15.44■□□□□ 0.06
USP34-221ENST00000494867 TATP17735 454 aaPredicted RBP15.44■□□□□ 0.06
USP34-221ENST00000494867 SSUH2Q9Y2M2 353 aa15.44■□□□□ 0.06
USP34-221ENST00000494867 SHANK3Q9BYB0 1731 aa15.43■□□□□ 0.06
USP34-221ENST00000494867 EXOC5O00471 708 aa15.43■□□□□ 0.06
USP34-221ENST00000494867 SOCS7O14512 581 aa15.43■□□□□ 0.06
USP34-221ENST00000494867 PKD1L3Q7Z443 1732 aa15.43■□□□□ 0.06
USP34-221ENST00000494867 IL13P35225 146 aa15.42■□□□□ 0.06
USP34-221ENST00000494867 MYBBP1AQ9BQG0 1328 aaKnown RBP15.42■□□□□ 0.06
USP34-221ENST00000494867 U2SURPO15042 1029 aaKnown RBP15.41■□□□□ 0.06
USP34-221ENST00000494867 AEBP1Q8IUX7 1158 aa15.4■□□□□ 0.06
USP34-221ENST00000494867 SULT6B1Q6IMI4 303 aa15.39■□□□□ 0.05
USP34-221ENST00000494867 FAM196AQ6ZSG2 479 aa15.39■□□□□ 0.05
USP34-221ENST00000494867 MARCH10Q8NA82 808 aaPredicted RBP15.39■□□□□ 0.05
USP34-221ENST00000494867 ZCRB1Q8TBF4 217 aaKnown RBP15.39■□□□□ 0.05
USP34-221ENST00000494867 DDX54Q8TDD1 881 aaKnown RBP15.39■□□□□ 0.05
USP34-221ENST00000494867 PRKRIP1Q9H875 184 aaPredicted RBP15.39■□□□□ 0.05
USP34-221ENST00000494867 PCDH11XQ9BZA7 1347 aa15.39■□□□□ 0.05
USP34-221ENST00000494867 PCDH11YQ9BZA8 1340 aa15.39■□□□□ 0.05
USP34-221ENST00000494867 TNS1Q9HBL0 1735 aaKnown RBP15.38■□□□□ 0.05
USP34-221ENST00000494867 HMOX1P09601 288 aa15.38■□□□□ 0.05
USP34-221ENST00000494867 UPF1Q92900 1129 aaKnown RBP eCLIP15.38■□□□□ 0.05
USP34-221ENST00000494867 NUDCQ9Y266 331 aa15.38■□□□□ 0.05
USP34-221ENST00000494867 DOT1LQ8TEK3 1739 aa15.37■□□□□ 0.05
USP34-221ENST00000494867 SF3B2Q13435 895 aaKnown RBP15.37■□□□□ 0.05
USP34-221ENST00000494867 PLCD3Q8N3E9 789 aa15.37■□□□□ 0.05
USP34-221ENST00000494867 SPOCK2Q92563 424 aa15.37■□□□□ 0.05
USP34-221ENST00000494867 KDRP35968 1356 aa15.36■□□□□ 0.05
USP34-221ENST00000494867 SBF2Q86WG5 1849 aa15.36■□□□□ 0.05
USP34-221ENST00000494867 NHSQ6T4R5 1651 aa15.36■□□□□ 0.05
USP34-221ENST00000494867 ANP32CO43423 234 aa15.36■□□□□ 0.05
USP34-221ENST00000494867 SPG7Q9UQ90 795 aa15.36■□□□□ 0.05
USP34-221ENST00000494867 PLEKHG2Q9H7P9 1386 aa15.36■□□□□ 0.05
USP34-221ENST00000494867 TRIM37O94972 964 aa15.35■□□□□ 0.05
USP34-221ENST00000494867 U2AF1L5P0DN76 240 aaPredicted RBP15.34■□□□□ 0.05
USP34-221ENST00000494867 U2AF1Q01081 240 aaKnown RBP eCLIP15.34■□□□□ 0.052e-6■■■□□ 15.6
USP34-221ENST00000494867 BCL9O00512 1426 aa15.34■□□□□ 0.05
USP34-221ENST00000494867 PLEKHO1Q53GL0 409 aaPredicted RBP15.33■□□□□ 0.04
USP34-221ENST00000494867 ACSBG1Q96GR2 724 aa15.33■□□□□ 0.04
USP34-221ENST00000494867 TOGARAM1Q9Y4F4 1720 aa15.32■□□□□ 0.04
USP34-221ENST00000494867 ZNF530Q6P9A1 599 aaPredicted RBP15.32■□□□□ 0.04
USP34-221ENST00000494867 CYP27B1O15528 508 aa15.31■□□□□ 0.04
USP34-221ENST00000494867 AMOTQ4VCS5 1084 aa15.31■□□□□ 0.04
USP34-221ENST00000494867 CCDC125Q86Z20 511 aa15.31■□□□□ 0.04
USP34-221ENST00000494867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.31■□□□□ 0.046e-17■■■□□ 14.7
USP34-221ENST00000494867 PRKAR2BP31323 418 aa15.3■□□□□ 0.04
USP34-221ENST00000494867 BAG6P46379 1132 aa15.3■□□□□ 0.04
USP34-221ENST00000494867 C1orf141Q5JVX7 400 aa15.3■□□□□ 0.04
USP34-221ENST00000494867 SYTL4Q96C24 671 aaPredicted RBP15.3■□□□□ 0.04
USP34-221ENST00000494867 BTAF1O14981 1849 aa15.29■□□□□ 0.04
USP34-221ENST00000494867 PHKG2P15735 406 aa15.29■□□□□ 0.04
USP34-221ENST00000494867 IFNL2Q8IZJ0 200 aa15.29■□□□□ 0.04
USP34-221ENST00000494867 RSPH6AQ9H0K4 717 aa15.29■□□□□ 0.04
USP34-221ENST00000494867 APBA3O96018 575 aa15.28■□□□□ 0.04
USP34-221ENST00000494867 WDR43Q15061 677 aaKnown RBP eCLIP15.28■□□□□ 0.04
USP34-221ENST00000494867 MIER1Q8N108 512 aa15.28■□□□□ 0.04
USP34-221ENST00000494867 BCL11BQ9C0K0 894 aaPredicted RBP15.28■□□□□ 0.04
USP34-221ENST00000494867 KCNQ2O43526 872 aa15.27■□□□□ 0.04
USP34-221ENST00000494867 PLCB2Q00722 1185 aa15.27■□□□□ 0.04
USP34-221ENST00000494867 DEFB132Q7Z7B7 95 aa15.27■□□□□ 0.04
USP34-221ENST00000494867 NEFMP07197 916 aa15.26■□□□□ 0.03
USP34-221ENST00000494867 HSP90AB1P08238 724 aaKnown RBP15.26■□□□□ 0.03
USP34-221ENST00000494867 PTF1AQ7RTS3 328 aa15.26■□□□□ 0.03
USP34-221ENST00000494867 ITGB4P16144 1822 aa15.26■□□□□ 0.03
USP34-221ENST00000494867 RGPD3A6NKT7 1758 aaPredicted RBP15.26■□□□□ 0.03
USP34-221ENST00000494867 RGPD4Q7Z3J3 1758 aa15.26■□□□□ 0.03
USP34-221ENST00000494867 KDM6AO15550 1401 aaPredicted RBP15.26■□□□□ 0.03
USP34-221ENST00000494867 KAT6BQ8WYB5 2073 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms