RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 JMYQ8N9B5 988 aa10.02□□□□□ -0.81
FN1-225ENST00000494446 LTN1O94822 1766 aa10.01□□□□□ -0.81
FN1-225ENST00000494446 SYTL4Q96C24 671 aaPredicted RBP10.01□□□□□ -0.81
FN1-225ENST00000494446 NLRP2Q9NX02 1062 aa10.01□□□□□ -0.81
FN1-225ENST00000494446 C5P01031 1676 aa10□□□□□ -0.81
FN1-225ENST00000494446 IL2RBP14784 551 aa10□□□□□ -0.81
FN1-225ENST00000494446 KCNH5Q8NCM2 988 aa10□□□□□ -0.81
FN1-225ENST00000494446 DDX54Q8TDD1 881 aaKnown RBP10□□□□□ -0.81
FN1-225ENST00000494446 CABP2Q9NPB3 220 aa10□□□□□ -0.81
FN1-225ENST00000494446 IGSF1Q8N6C5 1336 aa10□□□□□ -0.81
FN1-225ENST00000494446 TAF1LQ8IZX4 1826 aa10□□□□□ -0.81
FN1-225ENST00000494446 C16orf71Q8IYS4 520 aaPredicted RBP9.99□□□□□ -0.81
FN1-225ENST00000494446 NMRK2Q9NPI5 230 aa9.99□□□□□ -0.81
FN1-225ENST00000494446 CABP1Q9NZU7 370 aa9.99□□□□□ -0.81
FN1-225ENST00000494446 N4BP2Q86UW6 1770 aaPredicted RBP9.98□□□□□ -0.81
FN1-225ENST00000494446 PRIM1P49642 420 aaKnown RBP9.98□□□□□ -0.81
FN1-225ENST00000494446 CCNL1Q9UK58 526 aaPredicted RBP9.98□□□□□ -0.81
FN1-225ENST00000494446 NFAT5O94916 1531 aa9.97□□□□□ -0.81
FN1-225ENST00000494446 USP54Q70EL1 1684 aa9.97□□□□□ -0.81
FN1-225ENST00000494446 RBM46Q8TBY0 533 aaKnown RBP9.97□□□□□ -0.81
FN1-225ENST00000494446 CICQ96RK0 1608 aaPredicted RBP9.96□□□□□ -0.82
FN1-225ENST00000494446 HSPA1AP0DMV8 641 aaKnown RBP9.95□□□□□ -0.82
FN1-225ENST00000494446 HSPA1BP0DMV9 641 aaKnown RBP9.95□□□□□ -0.82
FN1-225ENST00000494446 ERBB3P21860 1342 aa9.95□□□□□ -0.82
FN1-225ENST00000494446 TTC21BQ7Z4L5 1316 aa9.95□□□□□ -0.82
FN1-225ENST00000494446 KIAA1210Q9ULL0 1709 aa9.95□□□□□ -0.82
FN1-225ENST00000494446 UBR3Q6ZT12 1888 aa9.94□□□□□ -0.82
FN1-225ENST00000494446 RGPD2P0DJD1 1756 aa9.94□□□□□ -0.82
FN1-225ENST00000494446 PKD1L3Q7Z443 1732 aa9.94□□□□□ -0.82
FN1-225ENST00000494446 ANKRD36BQ8N2N9 1353 aa9.94□□□□□ -0.82
FN1-225ENST00000494446 FSTL1Q12841 308 aa9.94□□□□□ -0.82
FN1-225ENST00000494446 NSD2O96028 1365 aa9.93□□□□□ -0.82
FN1-225ENST00000494446 NCBP3Q53F19 620 aaKnown RBP9.93□□□□□ -0.82
FN1-225ENST00000494446 ARHGAP27Q6ZUM4 889 aa9.93□□□□□ -0.82
FN1-225ENST00000494446 FLAD1Q8NFF5 587 aa9.93□□□□□ -0.82
FN1-225ENST00000494446 ANKRD24Q8TF21 1146 aa9.93□□□□□ -0.82
FN1-225ENST00000494446 STAC3Q96MF2 364 aa9.93□□□□□ -0.82
FN1-225ENST00000494446 KIF13BQ9NQT8 1826 aa9.93□□□□□ -0.82
FN1-225ENST00000494446 FAM208AQ9UK61 1670 aaKnown RBP9.93□□□□□ -0.82
FN1-225ENST00000494446 USP47Q96K76 1375 aa9.92□□□□□ -0.82
FN1-225ENST00000494446 CENPJQ9HC77 1338 aaPredicted RBP9.92□□□□□ -0.82
FN1-225ENST00000494446 PCDH10Q9P2E7 1040 aa9.92□□□□□ -0.82
FN1-225ENST00000494446 KIAA1551Q9HCM1 1747 aa9.92□□□□□ -0.82
FN1-225ENST00000494446 C4BP0C0L5 1744 aa9.91□□□□□ -0.82
FN1-225ENST00000494446 TOGARAM1Q9Y4F4 1720 aa9.91□□□□□ -0.82
FN1-225ENST00000494446 TTC21AQ8NDW8 1320 aa9.91□□□□□ -0.82
FN1-225ENST00000494446 TNRC6CQ9HCJ0 1690 aaKnown RBP9.91□□□□□ -0.82
FN1-225ENST00000494446 DSG3P32926 999 aa9.91□□□□□ -0.82
FN1-225ENST00000494446 ZNF692Q9BU19 519 aaPredicted RBP9.91□□□□□ -0.82
FN1-225ENST00000494446 BCS1LQ9Y276 419 aa9.91□□□□□ -0.82
FN1-225ENST00000494446 SBF1O95248 1867 aa9.91□□□□□ -0.82
FN1-225ENST00000494446 BRCA1P38398 1863 aaKnown RBP9.91□□□□□ -0.82
FN1-225ENST00000494446 ARFGEF1Q9Y6D6 1849 aa9.91□□□□□ -0.82
FN1-225ENST00000494446 PHF14O94880 888 aa9.9□□□□□ -0.82
FN1-225ENST00000494446 SMIM5Q71RC9 77 aa9.9□□□□□ -0.82
FN1-225ENST00000494446 ITGB4P16144 1822 aa9.9□□□□□ -0.82
FN1-225ENST00000494446 MON2Q7Z3U7 1717 aa9.9□□□□□ -0.83
FN1-225ENST00000494446 KCPQ6ZWJ8 1503 aa9.89□□□□□ -0.83
FN1-225ENST00000494446 NBPF1Q3BBV0 1214 aa9.89□□□□□ -0.83
FN1-225ENST00000494446 LTV1Q96GA3 475 aaPredicted RBP9.89□□□□□ -0.83
FN1-225ENST00000494446 RRAGCQ9HB90 399 aa9.89□□□□□ -0.83
FN1-225ENST00000494446 KTN1Q86UP2 1357 aaKnown RBP9.88□□□□□ -0.83
FN1-225ENST00000494446 KDM2BQ8NHM5 1336 aa9.88□□□□□ -0.83
FN1-225ENST00000494446 CCDC88AQ3V6T2 1871 aa9.88□□□□□ -0.83
FN1-225ENST00000494446 A0A0G2JLW4 131 aa9.88□□□□□ -0.83
FN1-225ENST00000494446 C9orf131Q5VYM1 1079 aa9.88□□□□□ -0.83
FN1-225ENST00000494446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.88□□□□□ -0.83
FN1-225ENST00000494446 SMC1BQ8NDV3 1235 aa9.88□□□□□ -0.83
FN1-225ENST00000494446 AK7Q96M32 723 aa9.88□□□□□ -0.83
FN1-225ENST00000494446 PXDNLA1KZ92 1463 aa9.87□□□□□ -0.83
FN1-225ENST00000494446 FCHSD2O94868 740 aa9.87□□□□□ -0.83
FN1-225ENST00000494446 AMIGO3Q86WK7 504 aa9.87□□□□□ -0.83
FN1-225ENST00000494446 ZCRB1Q8TBF4 217 aaKnown RBP9.87□□□□□ -0.83
FN1-225ENST00000494446 PLEKHG2Q9H7P9 1386 aa9.87□□□□□ -0.83
FN1-225ENST00000494446 EVC2Q86UK5 1308 aa9.86□□□□□ -0.83
FN1-225ENST00000494446 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.86□□□□□ -0.83
FN1-225ENST00000494446 HMGB2P26583 209 aaKnown RBP9.86□□□□□ -0.83
FN1-225ENST00000494446 SPINK5Q9NQ38 1064 aaPredicted RBP9.86□□□□□ -0.83
FN1-225ENST00000494446 FAM161AQ3B820 660 aa9.85□□□□□ -0.83
FN1-225ENST00000494446 NME9Q86XW9 330 aa9.85□□□□□ -0.83
FN1-225ENST00000494446 PALLDQ8WX93 1383 aa9.85□□□□□ -0.83
FN1-225ENST00000494446 C10orf71Q711Q0 1435 aa9.84□□□□□ -0.83
FN1-225ENST00000494446 NSD3Q9BZ95 1437 aa9.84□□□□□ -0.83
FN1-225ENST00000494446 MMP10P09238 476 aa9.84□□□□□ -0.83
FN1-225ENST00000494446 TGFB2P61812 414 aa9.84□□□□□ -0.83
FN1-225ENST00000494446 RNF181Q9P0P0 153 aa9.84□□□□□ -0.83
FN1-225ENST00000494446 DPEP1P16444 411 aa9.83□□□□□ -0.84
FN1-225ENST00000494446 MPRIPQ6WCQ1 1025 aa9.83□□□□□ -0.84
FN1-225ENST00000494446 USP31Q70CQ4 1352 aa9.83□□□□□ -0.84
FN1-225ENST00000494446 MEGF6O75095 1541 aa9.82□□□□□ -0.84
FN1-225ENST00000494446 MAP2P11137 1827 aaKnown RBP9.82□□□□□ -0.84
FN1-225ENST00000494446 SSFA2P28290 1259 aa9.82□□□□□ -0.84
FN1-225ENST00000494446 IP6K1Q92551 441 aa9.82□□□□□ -0.84
FN1-225ENST00000494446 U3KPZ7 1027 aaPredicted RBP9.82□□□□□ -0.84
FN1-225ENST00000494446 FOXN1O15353 648 aa9.81□□□□□ -0.84
FN1-225ENST00000494446 C4AP0C0L4 1744 aa9.81□□□□□ -0.84
FN1-225ENST00000494446 SMARCC1Q92922 1105 aaPredicted RBP9.8□□□□□ -0.84
FN1-225ENST00000494446 MKRN1Q9UHC7 482 aaKnown RBP9.8□□□□□ -0.84
FN1-225ENST00000494446 RAB3GAP2Q9H2M9 1393 aa9.79□□□□□ -0.84
FN1-225ENST00000494446 GNPATO15228 680 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms