RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 NCOA4Q13772 614 aa14.3□□□□□ -0.12
HMGB3P14-201ENST00000494195 MRPL14Q6P1L8 145 aaKnown RBP14.3□□□□□ -0.12
HMGB3P14-201ENST00000494195 USP17L2Q6R6M4 530 aa14.3□□□□□ -0.12
HMGB3P14-201ENST00000494195 USP17L1Q7RTZ2 530 aa14.3□□□□□ -0.12
HMGB3P14-201ENST00000494195 CCDC97Q96F63 343 aaPredicted RBP14.3□□□□□ -0.12
HMGB3P14-201ENST00000494195 TSEN34Q9BSV6 310 aaKnown RBP14.3□□□□□ -0.12
HMGB3P14-201ENST00000494195 OSBPL3Q9H4L5 887 aa14.3□□□□□ -0.12
HMGB3P14-201ENST00000494195 SUPT5HO00267 1087 aaKnown RBP14.29□□□□□ -0.12
HMGB3P14-201ENST00000494195 UPP2O95045 317 aa14.29□□□□□ -0.12
HMGB3P14-201ENST00000494195 BMP1P13497 986 aa14.29□□□□□ -0.12
HMGB3P14-201ENST00000494195 TRIM46Q7Z4K8 759 aa14.29□□□□□ -0.12
HMGB3P14-201ENST00000494195 DEPDC4Q8N2C3 294 aa14.29□□□□□ -0.12
HMGB3P14-201ENST00000494195 ATP13A2Q9NQ11 1180 aa14.29□□□□□ -0.12
HMGB3P14-201ENST00000494195 DACH1Q9UI36 760 aa14.29□□□□□ -0.12
HMGB3P14-201ENST00000494195 SERPINA10Q9UK55 444 aa14.29□□□□□ -0.12
HMGB3P14-201ENST00000494195 CYP2U1Q7Z449 544 aa14.28□□□□□ -0.12
HMGB3P14-201ENST00000494195 LINC00528Q8N1L1 170 aa14.28□□□□□ -0.12
HMGB3P14-201ENST00000494195 AGBL1Q96MI9 1066 aa14.27□□□□□ -0.13
HMGB3P14-201ENST00000494195 NOD1Q9Y239 953 aa14.27□□□□□ -0.13
HMGB3P14-201ENST00000494195 ATP5J2-PTCD1G3V325 749 aa14.26□□□□□ -0.13
HMGB3P14-201ENST00000494195 SCARF1Q14162 830 aa14.26□□□□□ -0.13
HMGB3P14-201ENST00000494195 LMOD1P29536 600 aaPredicted RBP14.25□□□□□ -0.13
HMGB3P14-201ENST00000494195 RELBQ01201 579 aa14.25□□□□□ -0.13
HMGB3P14-201ENST00000494195 CFAP70Q5T0N1 1121 aa14.25□□□□□ -0.13
HMGB3P14-201ENST00000494195 CCDC82Q8N4S0 544 aa14.25□□□□□ -0.13
HMGB3P14-201ENST00000494195 KDF1Q8NAX2 398 aaPredicted RBP14.25□□□□□ -0.13
HMGB3P14-201ENST00000494195 PTGIRP43119 386 aa14.24□□□□□ -0.13
HMGB3P14-201ENST00000494195 C6orf118Q5T5N4 469 aa14.23□□□□□ -0.13
HMGB3P14-201ENST00000494195 PURBQ96QR8 312 aaKnown RBP14.23□□□□□ -0.13
HMGB3P14-201ENST00000494195 BMP2P12643 396 aa14.22□□□□□ -0.13
HMGB3P14-201ENST00000494195 SPINT1O43278 529 aa14.21□□□□□ -0.13
HMGB3P14-201ENST00000494195 GNRH1P01148 92 aa14.21□□□□□ -0.13
HMGB3P14-201ENST00000494195 TRIM50Q86XT4 487 aa14.21□□□□□ -0.13
HMGB3P14-201ENST00000494195 ZFP42Q96MM3 310 aa14.21□□□□□ -0.13
HMGB3P14-201ENST00000494195 MKRN1Q9UHC7 482 aaKnown RBP14.21□□□□□ -0.13
HMGB3P14-201ENST00000494195 ZNF395Q9H8N7 513 aaPredicted RBP14.2□□□□□ -0.14
HMGB3P14-201ENST00000494195 PCDHGA11Q9Y5H2 935 aa14.2□□□□□ -0.14
HMGB3P14-201ENST00000494195 GTF2IP78347 998 aa14.19□□□□□ -0.14
HMGB3P14-201ENST00000494195 SENP2Q9HC62 589 aa14.19□□□□□ -0.14
HMGB3P14-201ENST00000494195 ARHGEF10LQ9HCE6 1279 aa14.18□□□□□ -0.14
HMGB3P14-201ENST00000494195 GMPR2Q9P2T1 348 aaKnown RBP14.18□□□□□ -0.14
HMGB3P14-201ENST00000494195 A0A1W2PRU2 124 aa14.17□□□□□ -0.14
HMGB3P14-201ENST00000494195 RFX1P22670 979 aa14.17□□□□□ -0.14
HMGB3P14-201ENST00000494195 ATP1A2P50993 1020 aa14.17□□□□□ -0.14
HMGB3P14-201ENST00000494195 KANK4Q5T7N3 995 aaPredicted RBP14.16□□□□□ -0.14
HMGB3P14-201ENST00000494195 KIFC2Q96AC6 838 aa14.16□□□□□ -0.14
HMGB3P14-201ENST00000494195 VRTNQ9H8Y1 702 aa14.16□□□□□ -0.14
HMGB3P14-201ENST00000494195 CLN3Q13286 438 aa14.15□□□□□ -0.14
HMGB3P14-201ENST00000494195 ESCO1Q5FWF5 840 aa14.15□□□□□ -0.14
HMGB3P14-201ENST00000494195 INSM2Q96T92 566 aaPredicted RBP14.15□□□□□ -0.14
HMGB3P14-201ENST00000494195 CLDN10P78369 228 aa14.14□□□□□ -0.15
HMGB3P14-201ENST00000494195 PSME1Q06323 249 aa14.14□□□□□ -0.15
HMGB3P14-201ENST00000494195 OGFOD1Q8N543 542 aa14.14□□□□□ -0.15
HMGB3P14-201ENST00000494195 TRIM47Q96LD4 638 aa14.14□□□□□ -0.15
HMGB3P14-201ENST00000494195 RAB6BQ9NRW1 208 aa14.14□□□□□ -0.15
HMGB3P14-201ENST00000494195 DNAAF2Q9NVR5 837 aaKnown RBP14.14□□□□□ -0.15
HMGB3P14-201ENST00000494195 MEN1O00255 615 aa14.13□□□□□ -0.15
HMGB3P14-201ENST00000494195 ETNK1Q9HBU6 452 aa14.13□□□□□ -0.15
HMGB3P14-201ENST00000494195 POLMQ9NP87 494 aaPredicted RBP14.13□□□□□ -0.15
HMGB3P14-201ENST00000494195 STAU1O95793 577 aaKnown RBP14.12□□□□□ -0.15
HMGB3P14-201ENST00000494195 RASA1P20936 1047 aa14.12□□□□□ -0.15
HMGB3P14-201ENST00000494195 SCNN1DP51172 638 aa14.12□□□□□ -0.15
HMGB3P14-201ENST00000494195 SOS2Q07890 1332 aaPredicted RBP14.12□□□□□ -0.15
HMGB3P14-201ENST00000494195 WASLO00401 505 aaPredicted RBP14.11□□□□□ -0.15
HMGB3P14-201ENST00000494195 IL2RAP01589 272 aa14.11□□□□□ -0.15
HMGB3P14-201ENST00000494195 CTSOP43234 321 aaPredicted RBP14.11□□□□□ -0.15
HMGB3P14-201ENST00000494195 GDF10P55107 478 aa14.11□□□□□ -0.15
HMGB3P14-201ENST00000494195 LARP1Q6PKG0 1096 aaKnown RBP14.11□□□□□ -0.15
HMGB3P14-201ENST00000494195 LARGE2Q8N3Y3 721 aa14.11□□□□□ -0.15
HMGB3P14-201ENST00000494195 XAGE2Q96GT9 111 aa14.11□□□□□ -0.15
HMGB3P14-201ENST00000494195 NLRP3Q96P20 1036 aa14.11□□□□□ -0.15
HMGB3P14-201ENST00000494195 ESYT1Q9BSJ8 1104 aa14.11□□□□□ -0.15
HMGB3P14-201ENST00000494195 TTLL8A6PVC2 850 aa14.1□□□□□ -0.15
HMGB3P14-201ENST00000494195 ZBTB7BO15156 539 aaPredicted RBP14.1□□□□□ -0.15
HMGB3P14-201ENST00000494195 CNKSR1Q969H4 720 aa14.1□□□□□ -0.15
HMGB3P14-201ENST00000494195 KIAA1024Q9UPX6 916 aa14.1□□□□□ -0.15
HMGB3P14-201ENST00000494195 POTECB2RU33 542 aa14.09□□□□□ -0.15
HMGB3P14-201ENST00000494195 C11orf95C9JLR9 678 aaPredicted RBP14.09□□□□□ -0.15
HMGB3P14-201ENST00000494195 INHAP05111 366 aa14.09□□□□□ -0.15
HMGB3P14-201ENST00000494195 GPC1P35052 558 aa14.09□□□□□ -0.15
HMGB3P14-201ENST00000494195 SRPK2P78362 688 aaKnown RBP14.09□□□□□ -0.15
HMGB3P14-201ENST00000494195 TPCN2Q8NHX9 752 aa14.09□□□□□ -0.15
HMGB3P14-201ENST00000494195 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.08□□□□□ -0.16
HMGB3P14-201ENST00000494195 FAM196BA6NMK8 535 aa14.08□□□□□ -0.16
HMGB3P14-201ENST00000494195 TMEM229AB2RXF0 380 aa14.08□□□□□ -0.16
HMGB3P14-201ENST00000494195 RNF144AP50876 292 aaPredicted RBP14.08□□□□□ -0.16
HMGB3P14-201ENST00000494195 CRTC2Q53ET0 693 aaPredicted RBP14.08□□□□□ -0.16
HMGB3P14-201ENST00000494195 FOXD4L5Q5VV16 416 aaPredicted RBP14.08□□□□□ -0.16
HMGB3P14-201ENST00000494195 CCDC102BQ68D86 513 aa14.08□□□□□ -0.16
HMGB3P14-201ENST00000494195 SIX5Q8N196 739 aa14.08□□□□□ -0.16
HMGB3P14-201ENST00000494195 PBXIP1Q96AQ6 731 aa14.08□□□□□ -0.16
HMGB3P14-201ENST00000494195 ZNF594Q96JF6 807 aaPredicted RBP14.08□□□□□ -0.16
HMGB3P14-201ENST00000494195 HRH3Q9Y5N1 445 aa14.08□□□□□ -0.16
HMGB3P14-201ENST00000494195 CDCA8Q53HL2 280 aa14.07□□□□□ -0.16
HMGB3P14-201ENST00000494195 USP17L15C9J2P7 530 aa14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 USP17L10C9JJH3 530 aa14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 USP17L13C9JLJ4 530 aa14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 USP17L12C9JPN9 530 aa14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 USP17L11C9JVI0 530 aa14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 USP17L21D6R901 530 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms