RNA–Protein interactions for RNA: ENST00000493546.1

PLXNA3-207, Transcript of plexin A3, humanhuman

TSL 3

Gene PLXNA3, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-207ENST00000493546 ZBTB7CA1YPR0 619 aa13.2□□□□□ -0.3
PLXNA3-207ENST00000493546 APBA3O96018 575 aa13.2□□□□□ -0.3
PLXNA3-207ENST00000493546 LARP1Q6PKG0 1096 aaKnown RBP13.2□□□□□ -0.3
PLXNA3-207ENST00000493546 EMILIN1Q9Y6C2 1016 aa13.2□□□□□ -0.3
PLXNA3-207ENST00000493546 FLT4P35916 1363 aa13.2□□□□□ -0.3
PLXNA3-207ENST00000493546 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
PLXNA3-207ENST00000493546 TMPOP42166 694 aaKnown RBP13.19□□□□□ -0.3
PLXNA3-207ENST00000493546 AMPHP49418 695 aa13.19□□□□□ -0.3
PLXNA3-207ENST00000493546 TRMT2AQ8IZ69 625 aaKnown RBP13.19□□□□□ -0.3
PLXNA3-207ENST00000493546 KCNH5Q8NCM2 988 aa13.19□□□□□ -0.3
PLXNA3-207ENST00000493546 CCDC136Q96JN2 1154 aa13.19□□□□□ -0.3
PLXNA3-207ENST00000493546 DISP2A7MBM2 1401 aa13.19□□□□□ -0.3
PLXNA3-207ENST00000493546 PRKAR2BP31323 418 aa13.18□□□□□ -0.3
PLXNA3-207ENST00000493546 IL13P35225 146 aa13.18□□□□□ -0.3
PLXNA3-207ENST00000493546 RRS1Q15050 365 aaKnown RBP13.18□□□□□ -0.3
PLXNA3-207ENST00000493546 BARGINQ6ZT62 677 aa13.18□□□□□ -0.3
PLXNA3-207ENST00000493546 CAMKK2Q96RR4 588 aa13.18□□□□□ -0.3
PLXNA3-207ENST00000493546 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
PLXNA3-207ENST00000493546 RRP7AQ9Y3A4 280 aaKnown RBP13.18□□□□□ -0.3
PLXNA3-207ENST00000493546 TNS1Q9HBL0 1735 aaKnown RBP13.18□□□□□ -0.3
PLXNA3-207ENST00000493546 CAMTA1Q9Y6Y1 1673 aa13.18□□□□□ -0.3
PLXNA3-207ENST00000493546 USP19O94966 1318 aa13.17□□□□□ -0.3
PLXNA3-207ENST00000493546 GCP02774 474 aa13.17□□□□□ -0.3
PLXNA3-207ENST00000493546 MS4A1P11836 297 aa13.17□□□□□ -0.3
PLXNA3-207ENST00000493546 RIPK4P57078 832 aa13.17□□□□□ -0.3
PLXNA3-207ENST00000493546 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
PLXNA3-207ENST00000493546 RTL1A6NKG5 1358 aa13.17□□□□□ -0.3
PLXNA3-207ENST00000493546 NFE2L2Q16236 605 aa13.16□□□□□ -0.3
PLXNA3-207ENST00000493546 CPDO75976 1380 aa13.16□□□□□ -0.3
PLXNA3-207ENST00000493546 MAP2P11137 1827 aaKnown RBP13.14□□□□□ -0.31
PLXNA3-207ENST00000493546 SOX12O15370 315 aa13.14□□□□□ -0.31
PLXNA3-207ENST00000493546 LMO7Q8WWI1 1683 aa13.13□□□□□ -0.31
PLXNA3-207ENST00000493546 COL5A2P05997 1499 aaPredicted RBP13.13□□□□□ -0.31
PLXNA3-207ENST00000493546 HMOX1P09601 288 aa13.13□□□□□ -0.31
PLXNA3-207ENST00000493546 EIF4A2Q14240 407 aaKnown RBP13.13□□□□□ -0.31
PLXNA3-207ENST00000493546 ZNF428Q96B54 188 aa13.13□□□□□ -0.31
PLXNA3-207ENST00000493546 THRAP3Q9Y2W1 955 aaKnown RBP13.13□□□□□ -0.31
PLXNA3-207ENST00000493546 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
PLXNA3-207ENST00000493546 USP54Q70EL1 1684 aa13.12□□□□□ -0.31
PLXNA3-207ENST00000493546 GNAI1P63096 354 aa13.12□□□□□ -0.31
PLXNA3-207ENST00000493546 AAMPQ13685 434 aa13.12□□□□□ -0.31
PLXNA3-207ENST00000493546 NBPF14Q5TI25 921 aa13.12□□□□□ -0.31
PLXNA3-207ENST00000493546 SULT6B1Q6IMI4 303 aa13.11□□□□□ -0.31
PLXNA3-207ENST00000493546 CRB1P82279 1406 aa13.11□□□□□ -0.31
PLXNA3-207ENST00000493546 PIK3C2AO00443 1686 aa13.11□□□□□ -0.31
PLXNA3-207ENST00000493546 PDE3AQ14432 1141 aa13.1□□□□□ -0.31
PLXNA3-207ENST00000493546 TOM1L2Q6ZVM7 507 aa13.1□□□□□ -0.31
PLXNA3-207ENST00000493546 GAS2L2Q8NHY3 880 aa13.1□□□□□ -0.31
PLXNA3-207ENST00000493546 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
PLXNA3-207ENST00000493546 FBLN1P23142 703 aa13.09□□□□□ -0.31
PLXNA3-207ENST00000493546 B4GALNT3Q6L9W6 998 aa13.09□□□□□ -0.31
PLXNA3-207ENST00000493546 IFT57Q9NWB7 429 aa13.09□□□□□ -0.31
PLXNA3-207ENST00000493546 FANCIQ9NVI1 1328 aa13.09□□□□□ -0.31
PLXNA3-207ENST00000493546 IPO8O15397 1037 aaKnown RBP13.08□□□□□ -0.32
PLXNA3-207ENST00000493546 HOXC9P31274 260 aa13.08□□□□□ -0.32
PLXNA3-207ENST00000493546 DDB1Q16531 1140 aa13.08□□□□□ -0.32
PLXNA3-207ENST00000493546 HSP90AB2PQ58FF8 381 aa13.08□□□□□ -0.32
PLXNA3-207ENST00000493546 TRIM35Q9UPQ4 493 aa13.08□□□□□ -0.32
PLXNA3-207ENST00000493546 RREB1Q92766 1687 aa13.08□□□□□ -0.32
PLXNA3-207ENST00000493546 OVOS2A0A0G2JMS6 1433 aa13.07□□□□□ -0.32
PLXNA3-207ENST00000493546 CSB-PGBD3P0DP91 1061 aa13.07□□□□□ -0.32
PLXNA3-207ENST00000493546 SPINK5Q9NQ38 1064 aaPredicted RBP13.07□□□□□ -0.32
PLXNA3-207ENST00000493546 NUP188Q5SRE5 1749 aa13.07□□□□□ -0.32
PLXNA3-207ENST00000493546 PARP4Q9UKK3 1724 aaKnown RBP13.07□□□□□ -0.32
PLXNA3-207ENST00000493546 SLIT3O75094 1523 aa13.07□□□□□ -0.32
PLXNA3-207ENST00000493546 KIF16BQ96L93 1317 aa13.07□□□□□ -0.32
PLXNA3-207ENST00000493546 RARSP54136 660 aaKnown RBP13.06□□□□□ -0.32
PLXNA3-207ENST00000493546 EXOC6Q8TAG9 804 aa13.06□□□□□ -0.32
PLXNA3-207ENST00000493546 IP6K1Q92551 441 aa13.06□□□□□ -0.32
PLXNA3-207ENST00000493546 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
PLXNA3-207ENST00000493546 PPP1R1BQ9UD71 204 aaPredicted RBP13.06□□□□□ -0.32
PLXNA3-207ENST00000493546 AXIN2Q9Y2T1 843 aa13.06□□□□□ -0.32
PLXNA3-207ENST00000493546 IGSF1Q8N6C5 1336 aa13.06□□□□□ -0.32
PLXNA3-207ENST00000493546 HTATSF1O43719 755 aaKnown RBP13.05□□□□□ -0.32
PLXNA3-207ENST00000493546 PLIN1O60240 522 aa13.05□□□□□ -0.32
PLXNA3-207ENST00000493546 ALDH1L2Q3SY69 923 aa13.05□□□□□ -0.32
PLXNA3-207ENST00000493546 FTSJ3Q8IY81 847 aaKnown RBP13.05□□□□□ -0.32
PLXNA3-207ENST00000493546 CRBNQ96SW2 442 aa13.05□□□□□ -0.32
PLXNA3-207ENST00000493546 SMC4Q9NTJ3 1288 aa13.05□□□□□ -0.32
PLXNA3-207ENST00000493546 LAS1LQ9Y4W2 734 aaKnown RBP13.05□□□□□ -0.32
PLXNA3-207ENST00000493546 WDR17Q8IZU2 1322 aa13.05□□□□□ -0.32
PLXNA3-207ENST00000493546 LRRC37A3O60309 1634 aa13.04□□□□□ -0.32
PLXNA3-207ENST00000493546 ZKSCAN2Q63HK3 967 aa13.04□□□□□ -0.32
PLXNA3-207ENST00000493546 PTF1AQ7RTS3 328 aa13.04□□□□□ -0.32
PLXNA3-207ENST00000493546 ARHGEF25Q86VW2 580 aa13.04□□□□□ -0.32
PLXNA3-207ENST00000493546 FRAT1Q92837 279 aaPredicted RBP13.04□□□□□ -0.32
PLXNA3-207ENST00000493546 CFAP44Q96MT7 982 aa13.04□□□□□ -0.32
PLXNA3-207ENST00000493546 SPON1Q9HCB6 807 aa13.04□□□□□ -0.32
PLXNA3-207ENST00000493546 KDRP35968 1356 aa13.04□□□□□ -0.32
PLXNA3-207ENST00000493546 KCNQ2O43526 872 aa13.03□□□□□ -0.32
PLXNA3-207ENST00000493546 EXOSC9Q06265 439 aaKnown RBP13.03□□□□□ -0.32
PLXNA3-207ENST00000493546 MARCH10Q8NA82 808 aaPredicted RBP13.03□□□□□ -0.32
PLXNA3-207ENST00000493546 PHACTR3Q96KR7 559 aa13.03□□□□□ -0.32
PLXNA3-207ENST00000493546 CHMP4AQ9BY43 222 aa13.03□□□□□ -0.32
PLXNA3-207ENST00000493546 BCL11BQ9C0K0 894 aaPredicted RBP13.03□□□□□ -0.32
PLXNA3-207ENST00000493546 PEAK1Q9H792 1746 aa13.02□□□□□ -0.32
PLXNA3-207ENST00000493546 PLSCR1O15162 318 aa13.02□□□□□ -0.33
PLXNA3-207ENST00000493546 BCAR3O75815 825 aa13.02□□□□□ -0.33
PLXNA3-207ENST00000493546 TSR2Q969E8 191 aaKnown RBP13.02□□□□□ -0.33
PLXNA3-207ENST00000493546 EYA1Q99502 592 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms