RNA–Protein interactions for RNA: ENST00000493415.5

A1CF-210, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 926 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-210ENST00000493415 NBPF1Q3BBV0 1214 aa8.29□□□□□ -1.08
A1CF-210ENST00000493415 SLC27A3Q5K4L6 730 aa8.29□□□□□ -1.08
A1CF-210ENST00000493415 DDX54Q8TDD1 881 aaKnown RBP8.29□□□□□ -1.08
A1CF-210ENST00000493415 AKT1S1Q96B36 256 aa8.29□□□□□ -1.08
A1CF-210ENST00000493415 ERBB3P21860 1342 aa8.29□□□□□ -1.08
A1CF-210ENST00000493415 EVC2Q86UK5 1308 aa8.29□□□□□ -1.08
A1CF-210ENST00000493415 TTC21AQ8NDW8 1320 aa8.29□□□□□ -1.08
A1CF-210ENST00000493415 C5P01031 1676 aa8.28□□□□□ -1.08
A1CF-210ENST00000493415 WWC3Q9ULE0 1092 aa8.28□□□□□ -1.08
A1CF-210ENST00000493415 KTN1Q86UP2 1357 aaKnown RBP8.27□□□□□ -1.09
A1CF-210ENST00000493415 ATXN8OSP0DMR3 200 aa8.27□□□□□ -1.09
A1CF-210ENST00000493415 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.27□□□□□ -1.09
A1CF-210ENST00000493415 ANKRD24Q8TF21 1146 aa8.27□□□□□ -1.09
A1CF-210ENST00000493415 RGPD2P0DJD1 1756 aa8.26□□□□□ -1.09
A1CF-210ENST00000493415 CAPN15O75808 1086 aa8.26□□□□□ -1.09
A1CF-210ENST00000493415 LTV1Q96GA3 475 aaPredicted RBP8.26□□□□□ -1.09
A1CF-210ENST00000493415 ZNF692Q9BU19 519 aaPredicted RBP8.26□□□□□ -1.09
A1CF-210ENST00000493415 CCNL1Q9UK58 526 aaPredicted RBP8.26□□□□□ -1.09
A1CF-210ENST00000493415 USP54Q70EL1 1684 aa8.26□□□□□ -1.09
A1CF-210ENST00000493415 TAF1LQ8IZX4 1826 aa8.25□□□□□ -1.09
A1CF-210ENST00000493415 ADCY9O60503 1353 aa8.24□□□□□ -1.09
A1CF-210ENST00000493415 USP47Q96K76 1375 aa8.24□□□□□ -1.09
A1CF-210ENST00000493415 WDR90Q96KV7 1748 aa8.24□□□□□ -1.09
A1CF-210ENST00000493415 PRIM1P49642 420 aaKnown RBP8.24□□□□□ -1.09
A1CF-210ENST00000493415 ANKRD36BQ8N2N9 1353 aa8.23□□□□□ -1.09
A1CF-210ENST00000493415 APLP1P51693 650 aa8.23□□□□□ -1.09
A1CF-210ENST00000493415 SAMD1Q6SPF0 538 aaPredicted RBP8.23□□□□□ -1.09
A1CF-210ENST00000493415 NME9Q86XW9 330 aa8.23□□□□□ -1.09
A1CF-210ENST00000493415 COL23A1Q86Y22 540 aaPredicted RBP8.23□□□□□ -1.09
A1CF-210ENST00000493415 CEP350Q5VT06 3117 aa8.23□□□□□ -1.09
A1CF-210ENST00000493415 IGSF1Q8N6C5 1336 aa8.23□□□□□ -1.09
A1CF-210ENST00000493415 TMC1Q8TDI8 760 aa8.22□□□□□ -1.09
A1CF-210ENST00000493415 CD2APQ9Y5K6 639 aa8.22□□□□□ -1.09
A1CF-210ENST00000493415 ROCK2O75116 1388 aaKnown RBP8.22□□□□□ -1.09
A1CF-210ENST00000493415 C4BP0C0L5 1744 aa8.21□□□□□ -1.09
A1CF-210ENST00000493415 GOLGB1Q14789 3259 aaKnown RBP8.21□□□□□ -1.1
A1CF-210ENST00000493415 PHF14O94880 888 aa8.21□□□□□ -1.1
A1CF-210ENST00000493415 HDGFL2Q7Z4V5 671 aaPredicted RBP8.21□□□□□ -1.1
A1CF-210ENST00000493415 NSD2O96028 1365 aa8.21□□□□□ -1.1
A1CF-210ENST00000493415 USP31Q70CQ4 1352 aa8.21□□□□□ -1.1
A1CF-210ENST00000493415 N4BP2Q86UW6 1770 aaPredicted RBP8.2□□□□□ -1.1
A1CF-210ENST00000493415 UBR3Q6ZT12 1888 aa8.2□□□□□ -1.1
A1CF-210ENST00000493415 KIF3CO14782 793 aa8.2□□□□□ -1.1
A1CF-210ENST00000493415 AK7Q96M32 723 aa8.2□□□□□ -1.1
A1CF-210ENST00000493415 RNF39Q9H2S5 420 aa8.2□□□□□ -1.1
A1CF-210ENST00000493415 ITGB4P16144 1822 aa8.19□□□□□ -1.1
A1CF-210ENST00000493415 MEGF6O75095 1541 aa8.19□□□□□ -1.1
A1CF-210ENST00000493415 C16orf71Q8IYS4 520 aaPredicted RBP8.19□□□□□ -1.1
A1CF-210ENST00000493415 FLAD1Q8NFF5 587 aa8.19□□□□□ -1.1
A1CF-210ENST00000493415 ZCRB1Q8TBF4 217 aaKnown RBP8.19□□□□□ -1.1
A1CF-210ENST00000493415 TOGARAM1Q9Y4F4 1720 aa8.19□□□□□ -1.1
A1CF-210ENST00000493415 PALLDQ8WX93 1383 aa8.19□□□□□ -1.1
A1CF-210ENST00000493415 CICQ96RK0 1608 aaPredicted RBP8.18□□□□□ -1.1
A1CF-210ENST00000493415 AMPHP49418 695 aa8.18□□□□□ -1.1
A1CF-210ENST00000493415 TNS4Q8IZW8 715 aa8.18□□□□□ -1.1
A1CF-210ENST00000493415 EDC4Q6P2E9 1401 aaKnown RBP8.18□□□□□ -1.1
A1CF-210ENST00000493415 SMG6Q86US8 1419 aaKnown RBP8.18□□□□□ -1.1
A1CF-210ENST00000493415 NSD3Q9BZ95 1437 aa8.18□□□□□ -1.1
A1CF-210ENST00000493415 PKD1L3Q7Z443 1732 aa8.17□□□□□ -1.1
A1CF-210ENST00000493415 TOMM70O94826 608 aa8.17□□□□□ -1.1
A1CF-210ENST00000493415 HMGB2P26583 209 aaKnown RBP8.17□□□□□ -1.1
A1CF-210ENST00000493415 IP6K1Q92551 441 aa8.17□□□□□ -1.1
A1CF-210ENST00000493415 SBNO2Q9Y2G9 1366 aa8.17□□□□□ -1.1
A1CF-210ENST00000493415 A0A1W2PP64 1363 aa8.16□□□□□ -1.1
A1CF-210ENST00000493415 HTRA3P83110 453 aa8.16□□□□□ -1.1
A1CF-210ENST00000493415 COL13A1Q5TAT6 717 aaPredicted RBP8.16□□□□□ -1.1
A1CF-210ENST00000493415 MPRIPQ6WCQ1 1025 aa8.16□□□□□ -1.1
A1CF-210ENST00000493415 USHBP1Q8N6Y0 703 aa8.16□□□□□ -1.1
A1CF-210ENST00000493415 RAPGEF4Q8WZA2 1011 aa8.16□□□□□ -1.1
A1CF-210ENST00000493415 CD163L1Q9NR16 1453 aa8.16□□□□□ -1.1
A1CF-210ENST00000493415 BCS1LQ9Y276 419 aa8.16□□□□□ -1.1
A1CF-210ENST00000493415 KIF13BQ9NQT8 1826 aa8.15□□□□□ -1.1
A1CF-210ENST00000493415 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.15□□□□□ -1.1
A1CF-210ENST00000493415 TATP17735 454 aaPredicted RBP8.15□□□□□ -1.1
A1CF-210ENST00000493415 HOXC9P31274 260 aa8.15□□□□□ -1.1
A1CF-210ENST00000493415 SMIM5Q71RC9 77 aa8.15□□□□□ -1.1
A1CF-210ENST00000493415 COG3Q96JB2 828 aa8.15□□□□□ -1.1
A1CF-210ENST00000493415 NMRK2Q9NPI5 230 aa8.15□□□□□ -1.1
A1CF-210ENST00000493415 TERF2IPQ9NYB0 399 aa8.15□□□□□ -1.1
A1CF-210ENST00000493415 KIAA1551Q9HCM1 1747 aa8.15□□□□□ -1.11
A1CF-210ENST00000493415 TNRC6CQ9HCJ0 1690 aaKnown RBP8.14□□□□□ -1.11
A1CF-210ENST00000493415 MAP3K19Q56UN5 1328 aa8.14□□□□□ -1.11
A1CF-210ENST00000493415 PCDH11XQ9BZA7 1347 aa8.14□□□□□ -1.11
A1CF-210ENST00000493415 PCDH11YQ9BZA8 1340 aa8.14□□□□□ -1.11
A1CF-210ENST00000493415 ARHGAP27Q6ZUM4 889 aa8.14□□□□□ -1.11
A1CF-210ENST00000493415 L3MBTL2Q969R5 705 aa8.14□□□□□ -1.11
A1CF-210ENST00000493415 KLRG1Q96E93 195 aa8.14□□□□□ -1.11
A1CF-210ENST00000493415 PXDNLA1KZ92 1463 aa8.13□□□□□ -1.11
A1CF-210ENST00000493415 BRCA1P38398 1863 aaKnown RBP8.13□□□□□ -1.11
A1CF-210ENST00000493415 PLEKHG2Q9H7P9 1386 aa8.13□□□□□ -1.11
A1CF-210ENST00000493415 KIF20BQ96Q89 1820 aa8.13□□□□□ -1.11
A1CF-210ENST00000493415 ARFGEF1Q9Y6D6 1849 aa8.13□□□□□ -1.11
A1CF-210ENST00000493415 GNPATO15228 680 aa8.13□□□□□ -1.11
A1CF-210ENST00000493415 DNAJC5GQ8N7S2 189 aa8.13□□□□□ -1.11
A1CF-210ENST00000493415 SMARCC1Q92922 1105 aaPredicted RBP8.13□□□□□ -1.11
A1CF-210ENST00000493415 SLC12A5Q9H2X9 1139 aa8.13□□□□□ -1.11
A1CF-210ENST00000493415 KCPQ6ZWJ8 1503 aa8.13□□□□□ -1.11
A1CF-210ENST00000493415 RTL1A6NKG5 1358 aa8.12□□□□□ -1.11
A1CF-210ENST00000493415 CGNL1Q0VF96 1302 aa8.12□□□□□ -1.11
A1CF-210ENST00000493415 FCHSD2O94868 740 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms