RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 CDC14CA4D256 554 aa7.62□□□□□ -1.19
VPS36-205ENST00000492650 ERVK-9P63128 1117 aa7.62□□□□□ -1.19
VPS36-205ENST00000492650 VWA5B2Q8N398 1253 aa7.62□□□□□ -1.19
VPS36-205ENST00000492650 GPR161Q8N6U8 529 aaKnown RBP7.62□□□□□ -1.19
VPS36-205ENST00000492650 A0A1W2PRU2 124 aa7.61□□□□□ -1.19
VPS36-205ENST00000492650 ITGA6P23229 1130 aa7.61□□□□□ -1.19
VPS36-205ENST00000492650 LORP23490 312 aaPredicted RBP7.61□□□□□ -1.19
VPS36-205ENST00000492650 RNF144AP50876 292 aaPredicted RBP7.61□□□□□ -1.19
VPS36-205ENST00000492650 NLRP3Q96P20 1036 aa7.61□□□□□ -1.19
VPS36-205ENST00000492650 CEP126Q9P2H0 1117 aa7.61□□□□□ -1.19
VPS36-205ENST00000492650 RHOQP17081 205 aa7.6□□□□□ -1.19
VPS36-205ENST00000492650 SCTRP47872 440 aa7.6□□□□□ -1.19
VPS36-205ENST00000492650 SV2AQ7L0J3 742 aa7.6□□□□□ -1.19
VPS36-205ENST00000492650 CYP2U1Q7Z449 544 aa7.6□□□□□ -1.19
VPS36-205ENST00000492650 NANOS1Q8WY41 292 aaKnown RBP7.6□□□□□ -1.19
VPS36-205ENST00000492650 CNTNAP3BQ96NU0 1288 aa7.6□□□□□ -1.19
VPS36-205ENST00000492650 CNTNAP3Q9BZ76 1288 aa7.6□□□□□ -1.19
VPS36-205ENST00000492650 EIF4G2P78344 907 aaKnown RBP eCLIP7.59□□□□□ -1.19
VPS36-205ENST00000492650 SLC27A3Q5K4L6 730 aa7.59□□□□□ -1.19
VPS36-205ENST00000492650 COL25A1Q9BXS0 654 aaPredicted RBP7.59□□□□□ -1.19
VPS36-205ENST00000492650 SENP3-EIF4A1A0A087X0R7 540 aa7.58□□□□□ -1.2
VPS36-205ENST00000492650 MYCP01106 439 aaPredicted RBP7.58□□□□□ -1.2
VPS36-205ENST00000492650 GDPD2Q9HCC8 539 aa7.58□□□□□ -1.2
VPS36-205ENST00000492650 GPC1P35052 558 aa7.57□□□□□ -1.2
VPS36-205ENST00000492650 ABL2P42684 1182 aa7.57□□□□□ -1.2
VPS36-205ENST00000492650 IRF5Q13568 498 aa7.57□□□□□ -1.2
VPS36-205ENST00000492650 CDCA7Q9BWT1 371 aaPredicted RBP7.57□□□□□ -1.2
VPS36-205ENST00000492650 OSBPL3Q9H4L5 887 aa7.57□□□□□ -1.2
VPS36-205ENST00000492650 ARHGEF10LQ9HCE6 1279 aa7.57□□□□□ -1.2
VPS36-205ENST00000492650 TRAK2O60296 914 aa7.56□□□□□ -1.2
VPS36-205ENST00000492650 KRT76Q01546 638 aa7.56□□□□□ -1.2
VPS36-205ENST00000492650 VAC14Q08AM6 782 aa7.56□□□□□ -1.2
VPS36-205ENST00000492650 POU4F2Q12837 409 aa7.56□□□□□ -1.2
VPS36-205ENST00000492650 CLN3Q13286 438 aa7.56□□□□□ -1.2
VPS36-205ENST00000492650 SLFNL1Q499Z3 407 aa7.56□□□□□ -1.2
VPS36-205ENST00000492650 CCDC85AQ96PX6 553 aaPredicted RBP7.56□□□□□ -1.2
VPS36-205ENST00000492650 RNFT1Q5M7Z0 435 aa7.55□□□□□ -1.2
VPS36-205ENST00000492650 RIPOR1Q6ZS17 1223 aa7.55□□□□□ -1.2
VPS36-205ENST00000492650 RAB6BQ9NRW1 208 aa7.55□□□□□ -1.2
VPS36-205ENST00000492650 GNRH1P01148 92 aa7.54□□□□□ -1.2
VPS36-205ENST00000492650 TSGA10IPQ3SY00 556 aa7.54□□□□□ -1.2
VPS36-205ENST00000492650 RNF135Q8IUD6 432 aa7.54□□□□□ -1.2
VPS36-205ENST00000492650 GAS2L1Q99501 681 aaPredicted RBP7.54□□□□□ -1.2
VPS36-205ENST00000492650 GRIP2Q9C0E4 1043 aa7.54□□□□□ -1.2
VPS36-205ENST00000492650 CNKSR1Q969H4 720 aa7.53□□□□□ -1.2
VPS36-205ENST00000492650 CUEDC1Q9NWM3 386 aaPredicted RBP7.53□□□□□ -1.2
VPS36-205ENST00000492650 DOLKQ9UPQ8 538 aa7.53□□□□□ -1.2
VPS36-205ENST00000492650 USP4Q13107 963 aa7.52□□□□□ -1.21
VPS36-205ENST00000492650 MCM6Q14566 821 aa7.52□□□□□ -1.21
VPS36-205ENST00000492650 WASHC4Q2M389 1173 aa7.52□□□□□ -1.21
VPS36-205ENST00000492650 OXLD1Q5BKU9 147 aa7.52□□□□□ -1.21
VPS36-205ENST00000492650 DYRK1BQ9Y463 629 aa7.52□□□□□ -1.21
VPS36-205ENST00000492650 CENPCQ03188 943 aa7.51□□□□□ -1.21
VPS36-205ENST00000492650 SEMA3FQ13275 785 aa7.51□□□□□ -1.21
VPS36-205ENST00000492650 NBPF10Q6P3W6 841 aaKnown RBP7.51□□□□□ -1.21
VPS36-205ENST00000492650 FOXR1Q6PIV2 292 aa7.51□□□□□ -1.21
VPS36-205ENST00000492650 PHTF2Q8N3S3 785 aa7.51□□□□□ -1.21
VPS36-205ENST00000492650 NBPF15Q8N660 670 aa7.51□□□□□ -1.21
VPS36-205ENST00000492650 ESYT1Q9BSJ8 1104 aa7.51□□□□□ -1.21
VPS36-205ENST00000492650 IL2RAP01589 272 aa7.5□□□□□ -1.21
VPS36-205ENST00000492650 GTF2E1P29083 439 aaPredicted RBP7.5□□□□□ -1.21
VPS36-205ENST00000492650 DBN1Q16643 649 aa7.5□□□□□ -1.21
VPS36-205ENST00000492650 TAS1R3Q7RTX0 852 aa7.5□□□□□ -1.21
VPS36-205ENST00000492650 TRIM22Q8IYM9 498 aa7.5□□□□□ -1.21
VPS36-205ENST00000492650 SVOPQ8N4V2 548 aa7.5□□□□□ -1.21
VPS36-205ENST00000492650 SIRT1Q96EB6 747 aa7.5□□□□□ -1.21
VPS36-205ENST00000492650 GMCL1Q96IK5 515 aa7.5□□□□□ -1.21
VPS36-205ENST00000492650 TIMMDC1Q9NPL8 285 aa7.5□□□□□ -1.21
VPS36-205ENST00000492650 SPATA31C2B4DYI2 1134 aa7.49□□□□□ -1.21
VPS36-205ENST00000492650 H7C1W4 665 aa7.49□□□□□ -1.21
VPS36-205ENST00000492650 WASLO00401 505 aaPredicted RBP7.49□□□□□ -1.21
VPS36-205ENST00000492650 ESCO1Q5FWF5 840 aa7.49□□□□□ -1.21
VPS36-205ENST00000492650 ZNF837Q96EG3 531 aaPredicted RBP7.49□□□□□ -1.21
VPS36-205ENST00000492650 ZSCAN10Q96SZ4 725 aaPredicted RBP7.49□□□□□ -1.21
VPS36-205ENST00000492650 GPR25O00155 361 aa7.48□□□□□ -1.21
VPS36-205ENST00000492650 PHKA2P46019 1235 aa7.48□□□□□ -1.21
VPS36-205ENST00000492650 WDR44Q5JSH3 913 aa7.48□□□□□ -1.21
VPS36-205ENST00000492650 TMEM214Q6NUQ4 689 aaKnown RBP7.48□□□□□ -1.21
VPS36-205ENST00000492650 XAGE2Q96GT9 111 aa7.48□□□□□ -1.21
VPS36-205ENST00000492650 ADAMTS2O95450 1211 aa7.47□□□□□ -1.21
VPS36-205ENST00000492650 STAU1O95793 577 aaKnown RBP7.47□□□□□ -1.21
VPS36-205ENST00000492650 F11P03951 625 aa7.47□□□□□ -1.21
VPS36-205ENST00000492650 SLURP2P0DP57 97 aa7.47□□□□□ -1.21
VPS36-205ENST00000492650 SOX11P35716 441 aa7.47□□□□□ -1.21
VPS36-205ENST00000492650 GNASQ5JWF2 1037 aa7.47□□□□□ -1.21
VPS36-205ENST00000492650 ZNF385CQ66K41 422 aaPredicted RBP7.47□□□□□ -1.21
VPS36-205ENST00000492650 WWC1Q8IX03 1113 aa7.47□□□□□ -1.21
VPS36-205ENST00000492650 WHAMMQ8TF30 809 aa7.47□□□□□ -1.21
VPS36-205ENST00000492650 GTPBP3Q969Y2 492 aaKnown RBP7.47□□□□□ -1.21
VPS36-205ENST00000492650 COG6Q9Y2V7 657 aa7.47□□□□□ -1.21
VPS36-205ENST00000492650 SRSF11Q05519 484 aaKnown RBP7.46□□□□□ -1.22
VPS36-205ENST00000492650 GAS6Q14393 721 aa7.46□□□□□ -1.22
VPS36-205ENST00000492650 MAP7D1Q3KQU3 841 aa7.46□□□□□ -1.22
VPS36-205ENST00000492650 PLPP7Q8NBV4 271 aa7.46□□□□□ -1.22
VPS36-205ENST00000492650 TRERF1Q96PN7 1200 aa7.46□□□□□ -1.22
VPS36-205ENST00000492650 ETNK1Q9HBU6 452 aa7.46□□□□□ -1.22
VPS36-205ENST00000492650 ADAMTS8Q9UP79 889 aa7.46□□□□□ -1.22
VPS36-205ENST00000492650 NUCKS1Q9H1E3 243 aaKnown RBP7.45□□□□□ -1.22
VPS36-205ENST00000492650 GPAMQ9HCL2 828 aa7.45□□□□□ -1.22
VPS36-205ENST00000492650 CHIC2Q9UKJ5 165 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms