RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 ALYREFQ86V81 257 aaKnown RBP6.69□□□□□ -1.34
HMGB1P30-201ENST00000492455 ZNF784Q8NCA9 323 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P30-201ENST00000492455 ITGB2P05107 769 aa6.68□□□□□ -1.34
HMGB1P30-201ENST00000492455 PNMA1Q8ND90 353 aa6.68□□□□□ -1.34
HMGB1P30-201ENST00000492455 PSMG3-AS1Q96PY0 264 aa6.68□□□□□ -1.34
HMGB1P30-201ENST00000492455 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
HMGB1P30-201ENST00000492455 TMPRSS4Q9NRS4 437 aa6.68□□□□□ -1.34
HMGB1P30-201ENST00000492455 RHOQP17081 205 aa6.67□□□□□ -1.34
HMGB1P30-201ENST00000492455 MX2P20592 715 aa6.67□□□□□ -1.34
HMGB1P30-201ENST00000492455 CLK2P49760 499 aaKnown RBP6.67□□□□□ -1.34
HMGB1P30-201ENST00000492455 RTL5Q5HYW3 569 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P30-201ENST00000492455 ACDQ96AP0 544 aa6.67□□□□□ -1.34
HMGB1P30-201ENST00000492455 MKL2Q9ULH7 1088 aa6.67□□□□□ -1.34
HMGB1P30-201ENST00000492455 GPSM3Q9Y4H4 160 aa6.67□□□□□ -1.34
HMGB1P30-201ENST00000492455 RNF144AP50876 292 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P30-201ENST00000492455 ZC3H15Q8WU90 426 aaKnown RBP6.66□□□□□ -1.34
HMGB1P30-201ENST00000492455 GTPBP3Q969Y2 492 aaKnown RBP6.66□□□□□ -1.34
HMGB1P30-201ENST00000492455 TRIM66O15016 1216 aa6.65□□□□□ -1.34
HMGB1P30-201ENST00000492455 FURINP09958 794 aa6.65□□□□□ -1.34
HMGB1P30-201ENST00000492455 DZIP3Q86Y13 1208 aaKnown RBP6.65□□□□□ -1.34
HMGB1P30-201ENST00000492455 ADAM32Q8TC27 787 aa6.65□□□□□ -1.34
HMGB1P30-201ENST00000492455 GAS2L1Q99501 681 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P30-201ENST00000492455 RSPH6AQ9H0K4 717 aa6.65□□□□□ -1.34
HMGB1P30-201ENST00000492455 ERVH48-1M5A8F1 160 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 PIK3R2O00459 728 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 OIP5O43482 229 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 MAP2K3P46734 347 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 CTDSPL2Q05D32 466 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 DBN1Q16643 649 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 RRAGCQ9HB90 399 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 DYRK1BQ9Y463 629 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 MEN1O00255 615 aa6.63□□□□□ -1.35
HMGB1P30-201ENST00000492455 GPC1P35052 558 aa6.63□□□□□ -1.35
HMGB1P30-201ENST00000492455 AK7Q96M32 723 aa6.63□□□□□ -1.35
HMGB1P30-201ENST00000492455 OXCT2Q9BYC2 517 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P30-201ENST00000492455 KRBA1A5PL33 1030 aa6.62□□□□□ -1.35
HMGB1P30-201ENST00000492455 ATP5J2-PTCD1G3V325 749 aa6.62□□□□□ -1.35
HMGB1P30-201ENST00000492455 LILRA1O75019 489 aa6.62□□□□□ -1.35
HMGB1P30-201ENST00000492455 ADD1P35611 737 aaKnown RBP6.62□□□□□ -1.35
HMGB1P30-201ENST00000492455 SLC27A3Q5K4L6 730 aa6.62□□□□□ -1.35
HMGB1P30-201ENST00000492455 CYLDQ9NQC7 956 aa6.62□□□□□ -1.35
HMGB1P30-201ENST00000492455 NR6A1Q15406 480 aa6.61□□□□□ -1.35
HMGB1P30-201ENST00000492455 LRRN4Q8WUT4 740 aa6.61□□□□□ -1.35
HMGB1P30-201ENST00000492455 NLRP3Q96P20 1036 aa6.61□□□□□ -1.35
HMGB1P30-201ENST00000492455 SNRPNP63162 240 aaKnown RBP6.6□□□□□ -1.35
HMGB1P30-201ENST00000492455 PPP2R2DQ66LE6 453 aa6.6□□□□□ -1.35
HMGB1P30-201ENST00000492455 SEPT12Q8IYM1 358 aa6.6□□□□□ -1.35
HMGB1P30-201ENST00000492455 KDF1Q8NAX2 398 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P30-201ENST00000492455 NUCKS1Q9H1E3 243 aaKnown RBP6.6□□□□□ -1.35
HMGB1P30-201ENST00000492455 POLR3EQ9NVU0 708 aa6.6□□□□□ -1.35
HMGB1P30-201ENST00000492455 PHF24Q9UPV7 400 aa6.6□□□□□ -1.35
HMGB1P30-201ENST00000492455 AMPD1P23109 780 aa6.59□□□□□ -1.35
HMGB1P30-201ENST00000492455 GRIN2CQ14957 1233 aa6.59□□□□□ -1.35
HMGB1P30-201ENST00000492455 GDF2Q9UK05 429 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P30-201ENST00000492455 ATP1B4Q9UN42 357 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P30-201ENST00000492455 POU4F2Q12837 409 aa6.58□□□□□ -1.36
HMGB1P30-201ENST00000492455 ESPNB1AK53 854 aa6.57□□□□□ -1.36
HMGB1P30-201ENST00000492455 F11P03951 625 aa6.57□□□□□ -1.36
HMGB1P30-201ENST00000492455 OCSTAMPQ9BR26 566 aa6.57□□□□□ -1.36
HMGB1P30-201ENST00000492455 CFHR5Q9BXR6 569 aa6.57□□□□□ -1.36
HMGB1P30-201ENST00000492455 TIMMDC1Q9NPL8 285 aa6.57□□□□□ -1.36
HMGB1P30-201ENST00000492455 A0A1W2PRU2 124 aa6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 PDE4DQ08499 809 aa6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 WDR44Q5JSH3 913 aa6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 NBPF10Q6P3W6 841 aaKnown RBP6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 NBPF15Q8N660 670 aa6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 GOLGA6L1Q8N7Z2 621 aa6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 EDARADDQ8WWZ3 215 aa6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 ESF1Q9H501 851 aaKnown RBP6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 SLC24A3Q9HC58 644 aa6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 SHISA8B8ZZ34 492 aa6.55□□□□□ -1.36
HMGB1P30-201ENST00000492455 COL8A1P27658 744 aa6.55□□□□□ -1.36
HMGB1P30-201ENST00000492455 TAS1R3Q7RTX0 852 aa6.55□□□□□ -1.36
HMGB1P30-201ENST00000492455 CCDC125Q86Z20 511 aa6.55□□□□□ -1.36
HMGB1P30-201ENST00000492455 NOP53Q9NZM5 478 aaKnown RBP6.55□□□□□ -1.36
HMGB1P30-201ENST00000492455 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P30-201ENST00000492455 WASLO00401 505 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P30-201ENST00000492455 GNB5O14775 395 aa6.54□□□□□ -1.36
HMGB1P30-201ENST00000492455 KLRG1Q96E93 195 aa6.54□□□□□ -1.36
HMGB1P30-201ENST00000492455 KRTAP9-2Q9BYQ4 174 aa6.54□□□□□ -1.36
HMGB1P30-201ENST00000492455 C1QTNF9BB2RNN3 333 aa6.53□□□□□ -1.36
HMGB1P30-201ENST00000492455 AP1G2O75843 785 aa6.53□□□□□ -1.36
HMGB1P30-201ENST00000492455 ZMYM1Q5SVZ6 1142 aa6.53□□□□□ -1.36
HMGB1P30-201ENST00000492455 CYP2U1Q7Z449 544 aa6.53□□□□□ -1.36
HMGB1P30-201ENST00000492455 SEMA6BQ9H3T3 888 aa6.53□□□□□ -1.36
HMGB1P30-201ENST00000492455 SPATA31C2B4DYI2 1134 aa6.52□□□□□ -1.37
HMGB1P30-201ENST00000492455 BMP4P12644 408 aa6.52□□□□□ -1.37
HMGB1P30-201ENST00000492455 GTF2E1P29083 439 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P30-201ENST00000492455 CC2D2BQ6DHV5 1058 aa6.52□□□□□ -1.37
HMGB1P30-201ENST00000492455 GRIP2Q9C0E4 1043 aa6.52□□□□□ -1.37
HMGB1P30-201ENST00000492455 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
HMGB1P30-201ENST00000492455 SCO2A0A1W2PP80 73 aa6.51□□□□□ -1.37
HMGB1P30-201ENST00000492455 CSB-PGBD3P0DP91 1061 aa6.51□□□□□ -1.37
HMGB1P30-201ENST00000492455 CLN3Q13286 438 aa6.51□□□□□ -1.37
HMGB1P30-201ENST00000492455 RNF20Q5VTR2 975 aa6.51□□□□□ -1.37
HMGB1P30-201ENST00000492455 PGBD3Q8N328 593 aa6.51□□□□□ -1.37
HMGB1P30-201ENST00000492455 BRPF1P55201 1214 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P30-201ENST00000492455 LBRQ14739 615 aaKnown RBP6.5□□□□□ -1.37
HMGB1P30-201ENST00000492455 SLCO4C1Q6ZQN7 724 aa6.5□□□□□ -1.37
HMGB1P30-201ENST00000492455 CD163Q86VB7 1156 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms