RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 USHBP1Q8N6Y0 703 aa18.71■□□□□ 0.59
PTPN7-215ENST00000492451 BCL11BQ9C0K0 894 aaPredicted RBP18.71■□□□□ 0.59
PTPN7-215ENST00000492451 KCNQ2O43526 872 aa18.7■□□□□ 0.58
PTPN7-215ENST00000492451 TATP17735 454 aaPredicted RBP18.7■□□□□ 0.58
PTPN7-215ENST00000492451 MTHFSP49914 203 aa18.7■□□□□ 0.58
PTPN7-215ENST00000492451 CNGB1Q14028 1251 aaPredicted RBP18.7■□□□□ 0.58
PTPN7-215ENST00000492451 PROM2Q8N271 834 aa18.7■□□□□ 0.58
PTPN7-215ENST00000492451 NCAPD2Q15021 1401 aa18.69■□□□□ 0.58
PTPN7-215ENST00000492451 EYA1Q99502 592 aa18.69■□□□□ 0.58
PTPN7-215ENST00000492451 LRP5O75197 1615 aa18.69■□□□□ 0.58
PTPN7-215ENST00000492451 ZCRB1Q8TBF4 217 aaKnown RBP18.68■□□□□ 0.58
PTPN7-215ENST00000492451 MEGF6O75095 1541 aa18.68■□□□□ 0.58
PTPN7-215ENST00000492451 PLSCR1O15162 318 aa18.67■□□□□ 0.58
PTPN7-215ENST00000492451 DDX10Q13206 875 aaKnown RBP18.67■□□□□ 0.58
PTPN7-215ENST00000492451 ACSBG1Q96GR2 724 aa18.67■□□□□ 0.58
PTPN7-215ENST00000492451 ANO8Q9HCE9 1232 aaPredicted RBP18.66■□□□□ 0.58
PTPN7-215ENST00000492451 IGSF1Q8N6C5 1336 aa18.66■□□□□ 0.58
PTPN7-215ENST00000492451 DDX54Q8TDD1 881 aaKnown RBP18.65■□□□□ 0.58
PTPN7-215ENST00000492451 PLEKHG2Q9H7P9 1386 aa18.64■□□□□ 0.57
PTPN7-215ENST00000492451 RGPD3A6NKT7 1758 aaPredicted RBP18.63■□□□□ 0.57
PTPN7-215ENST00000492451 RGPD4Q7Z3J3 1758 aa18.63■□□□□ 0.57
PTPN7-215ENST00000492451 IL13P35225 146 aa18.63■□□□□ 0.57
PTPN7-215ENST00000492451 DIAPH1O60610 1272 aaKnown RBP18.62■□□□□ 0.57
PTPN7-215ENST00000492451 CFAP53Q96M91 514 aa18.62■□□□□ 0.57
PTPN7-215ENST00000492451 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.62■□□□□ 0.57
PTPN7-215ENST00000492451 SPG7Q9UQ90 795 aa18.62■□□□□ 0.57
PTPN7-215ENST00000492451 PCDH11XQ9BZA7 1347 aa18.62■□□□□ 0.57
PTPN7-215ENST00000492451 PCDH11YQ9BZA8 1340 aa18.62■□□□□ 0.57
PTPN7-215ENST00000492451 NHSQ6T4R5 1651 aa18.62■□□□□ 0.57
PTPN7-215ENST00000492451 SHANK3Q9BYB0 1731 aa18.62■□□□□ 0.57
PTPN7-215ENST00000492451 PKD1L3Q7Z443 1732 aa18.61■□□□□ 0.57
PTPN7-215ENST00000492451 PPP2R1AP30153 589 aa18.61■□□□□ 0.57
PTPN7-215ENST00000492451 TXNRD1Q16881 649 aa18.61■□□□□ 0.57
PTPN7-215ENST00000492451 NBPF14Q5TI25 921 aa18.61■□□□□ 0.57
PTPN7-215ENST00000492451 PDGFDQ9GZP0 370 aaPredicted RBP18.61■□□□□ 0.57
PTPN7-215ENST00000492451 ZNF316A6NFI3 1004 aaPredicted RBP18.59■□□□□ 0.57
PTPN7-215ENST00000492451 SULT6B1Q6IMI4 303 aa18.58■□□□□ 0.56
PTPN7-215ENST00000492451 COL3A1P02461 1466 aaPredicted RBP18.58■□□□□ 0.56
PTPN7-215ENST00000492451 KDRP35968 1356 aa18.57■□□□□ 0.56
PTPN7-215ENST00000492451 RALBP1Q15311 655 aa18.57■□□□□ 0.56
PTPN7-215ENST00000492451 KAT6BQ8WYB5 2073 aa18.57■□□□□ 0.56
PTPN7-215ENST00000492451 AMOTQ4VCS5 1084 aa18.56■□□□□ 0.56
PTPN7-215ENST00000492451 PLEKHO1Q53GL0 409 aaPredicted RBP18.56■□□□□ 0.56
PTPN7-215ENST00000492451 CYP27B1O15528 508 aa18.55■□□□□ 0.56
PTPN7-215ENST00000492451 AEBP1Q8IUX7 1158 aa18.55■□□□□ 0.56
PTPN7-215ENST00000492451 NUDCQ9Y266 331 aa18.55■□□□□ 0.56
PTPN7-215ENST00000492451 BTAF1O14981 1849 aa18.55■□□□□ 0.56
PTPN7-215ENST00000492451 IFNL2Q8IZJ0 200 aa18.54■□□□□ 0.56
PTPN7-215ENST00000492451 DOT1LQ8TEK3 1739 aa18.54■□□□□ 0.56
PTPN7-215ENST00000492451 CASZ1Q86V15 1759 aa18.53■□□□□ 0.56
PTPN7-215ENST00000492451 U2SURPO15042 1029 aaKnown RBP18.53■□□□□ 0.56
PTPN7-215ENST00000492451 NKX1-1Q15270 411 aaPredicted RBP18.53■□□□□ 0.56
PTPN7-215ENST00000492451 LRRC4BQ9NT99 713 aa18.53■□□□□ 0.56
PTPN7-215ENST00000492451 PRIM1P49642 420 aaKnown RBP18.52■□□□□ 0.56
PTPN7-215ENST00000492451 SYTL4Q96C24 671 aaPredicted RBP18.52■□□□□ 0.56
PTPN7-215ENST00000492451 PAPPAQ13219 1627 aa18.52■□□□□ 0.55
PTPN7-215ENST00000492451 HSP90AB1P08238 724 aaKnown RBP18.51■□□□□ 0.55
PTPN7-215ENST00000492451 HMOX1P09601 288 aa18.51■□□□□ 0.55
PTPN7-215ENST00000492451 PHKG2P15735 406 aa18.51■□□□□ 0.55
PTPN7-215ENST00000492451 SLC15A2Q16348 729 aa18.51■□□□□ 0.55
PTPN7-215ENST00000492451 KCNQ4P56696 695 aa18.5■□□□□ 0.55
PTPN7-215ENST00000492451 ZNF827Q17R98 1081 aa18.5■□□□□ 0.55
PTPN7-215ENST00000492451 ZNF530Q6P9A1 599 aaPredicted RBP18.5■□□□□ 0.55
PTPN7-215ENST00000492451 ZBTB7AO95365 584 aa18.49■□□□□ 0.55
PTPN7-215ENST00000492451 C1orf141Q5JVX7 400 aa18.49■□□□□ 0.55
PTPN7-215ENST00000492451 STK32BQ9NY57 414 aa18.49■□□□□ 0.55
PTPN7-215ENST00000492451 SPON1Q9HCB6 807 aa18.48■□□□□ 0.55
PTPN7-215ENST00000492451 MYBBP1AQ9BQG0 1328 aaKnown RBP18.48■□□□□ 0.55
PTPN7-215ENST00000492451 DCAF5Q96JK2 942 aa18.47■□□□□ 0.55
PTPN7-215ENST00000492451 U2AF1L5P0DN76 240 aaPredicted RBP18.46■□□□□ 0.55
PTPN7-215ENST00000492451 U2AF1Q01081 240 aaKnown RBP eCLIP18.46■□□□□ 0.55
PTPN7-215ENST00000492451 ITGB4P16144 1822 aa18.46■□□□□ 0.55
PTPN7-215ENST00000492451 TOGARAM1Q9Y4F4 1720 aa18.46■□□□□ 0.55
PTPN7-215ENST00000492451 PTGER2P43116 358 aa18.45■□□□□ 0.54
PTPN7-215ENST00000492451 MPRIPQ6WCQ1 1025 aa18.45■□□□□ 0.54
PTPN7-215ENST00000492451 PRKRIP1Q9H875 184 aaPredicted RBP18.45■□□□□ 0.54
PTPN7-215ENST00000492451 ATF5Q9Y2D1 282 aaPredicted RBP18.45■□□□□ 0.54
PTPN7-215ENST00000492451 ERVV-2B6SEH9 535 aa18.44■□□□□ 0.54
PTPN7-215ENST00000492451 FCHSD2O94868 740 aa18.44■□□□□ 0.54
PTPN7-215ENST00000492451 AKAP4Q5JQC9 854 aa18.44■□□□□ 0.54
PTPN7-215ENST00000492451 AKT1S1Q96B36 256 aa18.44■□□□□ 0.54
PTPN7-215ENST00000492451 RSPH6AQ9H0K4 717 aa18.43■□□□□ 0.54
PTPN7-215ENST00000492451 TMOD3Q9NYL9 352 aa18.43■□□□□ 0.54
PTPN7-215ENST00000492451 SLC27A3Q5K4L6 730 aa18.42■□□□□ 0.54
PTPN7-215ENST00000492451 SMARCC1Q92922 1105 aaPredicted RBP18.42■□□□□ 0.54
PTPN7-215ENST00000492451 HMGB2P26583 209 aaKnown RBP18.41■□□□□ 0.54
PTPN7-215ENST00000492451 PRKAR2BP31323 418 aa18.41■□□□□ 0.54
PTPN7-215ENST00000492451 MTHFSDQ2M296 383 aaKnown RBP18.41■□□□□ 0.54
PTPN7-215ENST00000492451 GAS2L2Q8NHY3 880 aa18.41■□□□□ 0.54
PTPN7-215ENST00000492451 PIGBQ92521 554 aa18.41■□□□□ 0.54
PTPN7-215ENST00000492451 SGIP1Q9BQI5 828 aa18.41■□□□□ 0.54
PTPN7-215ENST00000492451 LY75O60449 1722 aa18.4■□□□□ 0.54
PTPN7-215ENST00000492451 PNNQ9H307 717 aaKnown RBP18.4■□□□□ 0.54
PTPN7-215ENST00000492451 PPP1R1BQ9UD71 204 aaPredicted RBP18.4■□□□□ 0.54
PTPN7-215ENST00000492451 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
PTPN7-215ENST00000492451 NEFMP07197 916 aa18.39■□□□□ 0.53
PTPN7-215ENST00000492451 CABP4P57796 275 aa18.39■□□□□ 0.53
PTPN7-215ENST00000492451 SCN11AQ9UI33 1791 aa18.39■□□□□ 0.53
PTPN7-215ENST00000492451 CCNL1Q9UK58 526 aaPredicted RBP18.38■□□□□ 0.53
PTPN7-215ENST00000492451 PNPLA7Q6ZV29 1317 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms