RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 NBPF4Q96M43 638 aa20.67■□□□□ 0.9
CDC42SE1-205ENST00000491825 SGIP1Q9BQI5 828 aa20.67■□□□□ 0.9
CDC42SE1-205ENST00000491825 CARD14Q9BXL6 1004 aa20.67■□□□□ 0.9
CDC42SE1-205ENST00000491825 KIF24Q5T7B8 1368 aa20.66■□□□□ 0.9
CDC42SE1-205ENST00000491825 KIF20BQ96Q89 1820 aa20.66■□□□□ 0.9
CDC42SE1-205ENST00000491825 RGPD2P0DJD1 1756 aa20.65■□□□□ 0.9
CDC42SE1-205ENST00000491825 INSRP06213 1382 aa20.65■□□□□ 0.9
CDC42SE1-205ENST00000491825 ZCRB1Q8TBF4 217 aaKnown RBP20.65■□□□□ 0.9
CDC42SE1-205ENST00000491825 POLR3GLQ9BT43 218 aa20.65■□□□□ 0.9
CDC42SE1-205ENST00000491825 MTFR1LQ9H019 292 aa20.65■□□□□ 0.9
CDC42SE1-205ENST00000491825 ATF5Q9Y2D1 282 aaPredicted RBP20.65■□□□□ 0.9
CDC42SE1-205ENST00000491825 UTRNP46939 3433 aa20.65■□□□□ 0.9
CDC42SE1-205ENST00000491825 NSD3Q9BZ95 1437 aa20.64■□□□□ 0.89
CDC42SE1-205ENST00000491825 FLT4P35916 1363 aa20.64■□□□□ 0.89
CDC42SE1-205ENST00000491825 SMG6Q86US8 1419 aaKnown RBP20.63■□□□□ 0.89
CDC42SE1-205ENST00000491825 HSP90AB2PQ58FF8 381 aa20.63■□□□□ 0.89
CDC42SE1-205ENST00000491825 USHBP1Q8N6Y0 703 aa20.63■□□□□ 0.89
CDC42SE1-205ENST00000491825 DOT1LQ8TEK3 1739 aa20.63■□□□□ 0.89
CDC42SE1-205ENST00000491825 CGNL1Q0VF96 1302 aa20.62■□□□□ 0.89
CDC42SE1-205ENST00000491825 PRIM1P49642 420 aaKnown RBP20.62■□□□□ 0.89
CDC42SE1-205ENST00000491825 SLC27A3Q5K4L6 730 aa20.62■□□□□ 0.89
CDC42SE1-205ENST00000491825 AKT1S1Q96B36 256 aa20.62■□□□□ 0.89
CDC42SE1-205ENST00000491825 ANKRD26Q9UPS8 1709 aa20.59■□□□□ 0.89
CDC42SE1-205ENST00000491825 SYTL4Q96C24 671 aaPredicted RBP20.59■□□□□ 0.89
CDC42SE1-205ENST00000491825 EMILIN1Q9Y6C2 1016 aa20.59■□□□□ 0.89
CDC42SE1-205ENST00000491825 NCAPD2Q15021 1401 aa20.59■□□□□ 0.89
CDC42SE1-205ENST00000491825 RAPGEF4Q8WZA2 1011 aa20.58■□□□□ 0.89
CDC42SE1-205ENST00000491825 PANK3Q9H999 370 aa20.58■□□□□ 0.89
CDC42SE1-205ENST00000491825 FHDC1Q9C0D6 1143 aaPredicted RBP20.57■□□□□ 0.88
CDC42SE1-205ENST00000491825 PNPLA7Q6ZV29 1317 aa20.56■□□□□ 0.88
CDC42SE1-205ENST00000491825 LY75O60449 1722 aa20.56■□□□□ 0.88
CDC42SE1-205ENST00000491825 KCNQ4P56696 695 aa20.56■□□□□ 0.88
CDC42SE1-205ENST00000491825 SYT17Q9BSW7 474 aa20.56■□□□□ 0.88
CDC42SE1-205ENST00000491825 TATP17735 454 aaPredicted RBP20.55■□□□□ 0.88
CDC42SE1-205ENST00000491825 YY1P25490 414 aa20.55■□□□□ 0.88
CDC42SE1-205ENST00000491825 MAP3K5Q99683 1374 aa20.55■□□□□ 0.88
CDC42SE1-205ENST00000491825 QSER1Q2KHR3 1735 aa20.55■□□□□ 0.88
CDC42SE1-205ENST00000491825 PCDH11XQ9BZA7 1347 aa20.54■□□□□ 0.88
CDC42SE1-205ENST00000491825 PCDH11YQ9BZA8 1340 aa20.54■□□□□ 0.88
CDC42SE1-205ENST00000491825 ARXQ96QS3 562 aa20.53■□□□□ 0.88
CDC42SE1-205ENST00000491825 CYP27B1O15528 508 aa20.52■□□□□ 0.88
CDC42SE1-205ENST00000491825 SLC16A10Q8TF71 515 aa20.52■□□□□ 0.88
CDC42SE1-205ENST00000491825 PKD1L3Q7Z443 1732 aa20.51■□□□□ 0.87
CDC42SE1-205ENST00000491825 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
CDC42SE1-205ENST00000491825 PER1O15534 1290 aaPredicted RBP20.51■□□□□ 0.87
CDC42SE1-205ENST00000491825 CCNL1Q9UK58 526 aaPredicted RBP20.51■□□□□ 0.87
CDC42SE1-205ENST00000491825 COL24A1Q17RW2 1714 aa20.5■□□□□ 0.87
CDC42SE1-205ENST00000491825 NPC1L1Q9UHC9 1359 aa20.5■□□□□ 0.87
CDC42SE1-205ENST00000491825 KNSTRNQ9Y448 316 aa20.5■□□□□ 0.87
CDC42SE1-205ENST00000491825 TUBGCP6Q96RT7 1819 aa20.5■□□□□ 0.87
CDC42SE1-205ENST00000491825 TFCP2L1Q9NZI6 479 aa20.49■□□□□ 0.87
CDC42SE1-205ENST00000491825 POLKQ9UBT6 870 aa20.49■□□□□ 0.87
CDC42SE1-205ENST00000491825 TOGARAM1Q9Y4F4 1720 aa20.49■□□□□ 0.87
CDC42SE1-205ENST00000491825 KAT6BQ8WYB5 2073 aa20.49■□□□□ 0.87
CDC42SE1-205ENST00000491825 AMER1Q5JTC6 1135 aaPredicted RBP20.48■□□□□ 0.87
CDC42SE1-205ENST00000491825 ZNF316A6NFI3 1004 aaPredicted RBP20.47■□□□□ 0.87
CDC42SE1-205ENST00000491825 PPM1GO15355 546 aaPredicted RBP20.47■□□□□ 0.87
CDC42SE1-205ENST00000491825 EYA1Q99502 592 aa20.47■□□□□ 0.87
CDC42SE1-205ENST00000491825 PALLDQ8WX93 1383 aa20.46■□□□□ 0.87
CDC42SE1-205ENST00000491825 NKX1-1Q15270 411 aaPredicted RBP20.46■□□□□ 0.87
CDC42SE1-205ENST00000491825 GOLGB1Q14789 3259 aaKnown RBP20.45■□□□□ 0.86
CDC42SE1-205ENST00000491825 MPRIPQ6WCQ1 1025 aa20.44■□□□□ 0.86
CDC42SE1-205ENST00000491825 COL23A1Q86Y22 540 aaPredicted RBP20.43■□□□□ 0.86
CDC42SE1-205ENST00000491825 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.43■□□□□ 0.86
CDC42SE1-205ENST00000491825 C5P01031 1676 aa20.42■□□□□ 0.86
CDC42SE1-205ENST00000491825 POLD1P28340 1107 aa20.42■□□□□ 0.86
CDC42SE1-205ENST00000491825 EIF4A2Q14240 407 aaKnown RBP20.42■□□□□ 0.86
CDC42SE1-205ENST00000491825 PLEKHG2Q9H7P9 1386 aa20.42■□□□□ 0.86
CDC42SE1-205ENST00000491825 PIGBQ92521 554 aa20.41■□□□□ 0.86
CDC42SE1-205ENST00000491825 SPG7Q9UQ90 795 aa20.41■□□□□ 0.86
CDC42SE1-205ENST00000491825 MAP2P11137 1827 aaKnown RBP20.4■□□□□ 0.86
CDC42SE1-205ENST00000491825 IGSF1Q8N6C5 1336 aa20.39■□□□□ 0.85
CDC42SE1-205ENST00000491825 TNNT2P45379 298 aaPredicted RBP20.39■□□□□ 0.85
CDC42SE1-205ENST00000491825 SMARCC1Q92922 1105 aaPredicted RBP20.39■□□□□ 0.85
CDC42SE1-205ENST00000491825 PHKG2P15735 406 aa20.38■□□□□ 0.85
CDC42SE1-205ENST00000491825 ITGB4P16144 1822 aa20.38■□□□□ 0.85
CDC42SE1-205ENST00000491825 DDX10Q13206 875 aaKnown RBP20.37■□□□□ 0.85
CDC42SE1-205ENST00000491825 AMIGO3Q86WK7 504 aa20.37■□□□□ 0.85
CDC42SE1-205ENST00000491825 NLGN2Q8NFZ4 835 aa20.37■□□□□ 0.85
CDC42SE1-205ENST00000491825 TAF1LQ8IZX4 1826 aa20.37■□□□□ 0.85
CDC42SE1-205ENST00000491825 C4BP0C0L5 1744 aa20.36■□□□□ 0.85
CDC42SE1-205ENST00000491825 HMGB2P26583 209 aaKnown RBP20.35■□□□□ 0.85
CDC42SE1-205ENST00000491825 MORC1Q86VD1 984 aa20.35■□□□□ 0.85
CDC42SE1-205ENST00000491825 IFNL2Q8IZJ0 200 aa20.35■□□□□ 0.85
CDC42SE1-205ENST00000491825 KLHL34Q8N239 644 aa20.35■□□□□ 0.85
CDC42SE1-205ENST00000491825 ZNF784Q8NCA9 323 aaPredicted RBP20.35■□□□□ 0.85
CDC42SE1-205ENST00000491825 MSH5O43196 834 aa20.34■□□□□ 0.85
CDC42SE1-205ENST00000491825 MSL1Q68DK7 614 aa20.34■□□□□ 0.85
CDC42SE1-205ENST00000491825 FLAD1Q8NFF5 587 aa20.34■□□□□ 0.85
CDC42SE1-205ENST00000491825 TMOD3Q9NYL9 352 aa20.34■□□□□ 0.85
CDC42SE1-205ENST00000491825 LOC102724428A0A0B4J2F2 783 aa20.33■□□□□ 0.85
CDC42SE1-205ENST00000491825 SIK1P57059 783 aa20.33■□□□□ 0.85
CDC42SE1-205ENST00000491825 CC2D1BQ5T0F9 858 aaKnown RBP20.33■□□□□ 0.85
CDC42SE1-205ENST00000491825 LINC00116Q8NCU8 138 aa20.32■□□□□ 0.84
CDC42SE1-205ENST00000491825 ASAP1Q9ULH1 1129 aa20.32■□□□□ 0.84
CDC42SE1-205ENST00000491825 GPR162Q16538 588 aa20.31■□□□□ 0.84
CDC42SE1-205ENST00000491825 AK7Q96M32 723 aa20.31■□□□□ 0.84
CDC42SE1-205ENST00000491825 KDRP35968 1356 aa20.31■□□□□ 0.84
CDC42SE1-205ENST00000491825 ITPK1Q13572 414 aa20.3■□□□□ 0.84
CDC42SE1-205ENST00000491825 KDM6AO15550 1401 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms