RNA–Protein interactions for RNA: ENST00000490546.1

PUM1-210, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-210	ENST00000490546	SALL2	Q9Y467	1007 aa	Predicted RBP	13.61	□□□□□ -0.23
PUM1-210	ENST00000490546	NRAP	Q86VF7	1730 aa		13.61	□□□□□ -0.23
PUM1-210	ENST00000490546	TMPO	P42166	694 aa	Known RBP	13.6	□□□□□ -0.23
PUM1-210	ENST00000490546	RIPK4	P57078	832 aa		13.6	□□□□□ -0.23
PUM1-210	ENST00000490546	LMOD3	Q0VAK6	560 aa		13.6	□□□□□ -0.23
PUM1-210	ENST00000490546	NCAPD2	Q15021	1401 aa		13.6	□□□□□ -0.23
PUM1-210	ENST00000490546	C1orf141	Q5JVX7	400 aa		13.6	□□□□□ -0.23
PUM1-210	ENST00000490546	PHF23	Q9BUL5	403 aa	Predicted RBP	13.6	□□□□□ -0.23
PUM1-210	ENST00000490546	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.59	□□□□□ -0.23
PUM1-210	ENST00000490546	SENP3-EIF4A1	A0A087X0R7	540 aa		13.59	□□□□□ -0.23
PUM1-210	ENST00000490546	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.59	□□□□□ -0.23
PUM1-210	ENST00000490546	ZCRB1	Q8TBF4	217 aa	Known RBP	13.59	□□□□□ -0.23
PUM1-210	ENST00000490546	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
PUM1-210	ENST00000490546	RRP7A	Q9Y3A4	280 aa	Known RBP	13.59	□□□□□ -0.23
PUM1-210	ENST00000490546	PLEKHG2	Q9H7P9	1386 aa		13.58	□□□□□ -0.23
PUM1-210	ENST00000490546		A0A0G2JS52	829 aa		13.58	□□□□□ -0.24
PUM1-210	ENST00000490546	EXOC5	O00471	708 aa		13.58	□□□□□ -0.24
PUM1-210	ENST00000490546	MYT1	Q01538	1121 aa		13.58	□□□□□ -0.24
PUM1-210	ENST00000490546	MTHFSD	Q2M296	383 aa	Known RBP	13.58	□□□□□ -0.24
PUM1-210	ENST00000490546	NCBP3	Q53F19	620 aa	Known RBP	13.58	□□□□□ -0.24
PUM1-210	ENST00000490546	BARGIN	Q6ZT62	677 aa		13.58	□□□□□ -0.24
PUM1-210	ENST00000490546	RTF1	Q92541	710 aa	Known RBP	13.58	□□□□□ -0.24
PUM1-210	ENST00000490546	GJD4	Q96KN9	370 aa	Predicted RBP	13.58	□□□□□ -0.24
PUM1-210	ENST00000490546	KAT6B	Q8WYB5	2073 aa		13.57	□□□□□ -0.24
PUM1-210	ENST00000490546	PARP4	Q9UKK3	1724 aa	Known RBP	13.56	□□□□□ -0.24
PUM1-210	ENST00000490546	GNAT3	A8MTJ3	354 aa		13.56	□□□□□ -0.24
PUM1-210	ENST00000490546	FAM98C	Q17RN3	349 aa	Known RBP	13.56	□□□□□ -0.24
PUM1-210	ENST00000490546	AKAP4	Q5JQC9	854 aa		13.56	□□□□□ -0.24
PUM1-210	ENST00000490546	ATRN	O75882	1429 aa		13.56	□□□□□ -0.24
PUM1-210	ENST00000490546	MEGF6	O75095	1541 aa		13.55	□□□□□ -0.24
PUM1-210	ENST00000490546	HTATSF1	O43719	755 aa	Known RBP	13.55	□□□□□ -0.24
PUM1-210	ENST00000490546	HSP90AB1	P08238	724 aa	Known RBP	13.55	□□□□□ -0.24
PUM1-210	ENST00000490546	CALD1	Q05682	793 aa	Known RBP	13.55	□□□□□ -0.24
PUM1-210	ENST00000490546	DDB1	Q16531	1140 aa		13.55	□□□□□ -0.24
PUM1-210	ENST00000490546	CCDC27	Q2M243	656 aa		13.55	□□□□□ -0.24
PUM1-210	ENST00000490546	IFNL2	Q8IZJ0	200 aa		13.55	□□□□□ -0.24
PUM1-210	ENST00000490546	DDX54	Q8TDD1	881 aa	Known RBP	13.55	□□□□□ -0.24
PUM1-210	ENST00000490546	PCDH11X	Q9BZA7	1347 aa		13.55	□□□□□ -0.24
PUM1-210	ENST00000490546	PCDH11Y	Q9BZA8	1340 aa		13.55	□□□□□ -0.24
PUM1-210	ENST00000490546	OVOS2	A0A0G2JMS6	1433 aa		13.55	□□□□□ -0.24
PUM1-210	ENST00000490546	RBM6	P78332	1123 aa	Known RBP	13.54	□□□□□ -0.24
PUM1-210	ENST00000490546	ZBED9	Q6R2W3	1325 aa		13.54	□□□□□ -0.24
PUM1-210	ENST00000490546	DLG5	Q8TDM6	1919 aa		13.54	□□□□□ -0.24
PUM1-210	ENST00000490546	WWC1	Q8IX03	1113 aa		13.53	□□□□□ -0.24
PUM1-210	ENST00000490546	MAP3K5	Q99683	1374 aa		13.53	□□□□□ -0.24
PUM1-210	ENST00000490546	PHKG2	P15735	406 aa		13.52	□□□□□ -0.25
PUM1-210	ENST00000490546	RXRB	P28702	533 aa		13.52	□□□□□ -0.25
PUM1-210	ENST00000490546	PDE3B	Q13370	1112 aa		13.52	□□□□□ -0.25
PUM1-210	ENST00000490546	WDR63	Q8IWG1	891 aa		13.52	□□□□□ -0.25
PUM1-210	ENST00000490546	TRIM35	Q9UPQ4	493 aa		13.52	□□□□□ -0.25
PUM1-210	ENST00000490546	DISP2	A7MBM2	1401 aa		13.51	□□□□□ -0.25
PUM1-210	ENST00000490546	GOLGA2	Q08379	1002 aa		13.51	□□□□□ -0.25
PUM1-210	ENST00000490546	WNK3	Q9BYP7	1800 aa		13.5	□□□□□ -0.25
PUM1-210	ENST00000490546	PKD1L3	Q7Z443	1732 aa		13.5	□□□□□ -0.25
PUM1-210	ENST00000490546	CYP27B1	O15528	508 aa		13.5	□□□□□ -0.25
PUM1-210	ENST00000490546	ONECUT3	O60422	494 aa	Predicted RBP	13.5	□□□□□ -0.25
PUM1-210	ENST00000490546	TEF	Q10587	303 aa		13.5	□□□□□ -0.25
PUM1-210	ENST00000490546	MPRIP	Q6WCQ1	1025 aa		13.5	□□□□□ -0.25
PUM1-210	ENST00000490546	MCM10	Q7L590	875 aa		13.5	□□□□□ -0.25
PUM1-210	ENST00000490546	DCAF5	Q96JK2	942 aa		13.5	□□□□□ -0.25
PUM1-210	ENST00000490546	RNMT	O43148	476 aa	Known RBP	13.49	□□□□□ -0.25
PUM1-210	ENST00000490546	DCTN1	Q14203	1278 aa		13.49	□□□□□ -0.25
PUM1-210	ENST00000490546	SEPT12	Q8IYM1	358 aa		13.49	□□□□□ -0.25
PUM1-210	ENST00000490546	LAS1L	Q9Y4W2	734 aa	Known RBP	13.49	□□□□□ -0.25
PUM1-210	ENST00000490546	IL16	Q14005	1332 aa		13.48	□□□□□ -0.25
PUM1-210	ENST00000490546	GNAI1	P63096	354 aa		13.48	□□□□□ -0.25
PUM1-210	ENST00000490546	GLI3	P10071	1580 aa		13.48	□□□□□ -0.25
PUM1-210	ENST00000490546	TNS2	Q63HR2	1409 aa		13.47	□□□□□ -0.25
PUM1-210	ENST00000490546		E9PSI1	815 aa		13.47	□□□□□ -0.25
PUM1-210	ENST00000490546	CENPB	P07199	599 aa	Predicted RBP	13.47	□□□□□ -0.25
PUM1-210	ENST00000490546	CABP4	P57796	275 aa		13.47	□□□□□ -0.25
PUM1-210	ENST00000490546	NKX1-1	Q15270	411 aa	Predicted RBP	13.47	□□□□□ -0.25
PUM1-210	ENST00000490546	IL17RE	Q8NFR9	667 aa		13.47	□□□□□ -0.25
PUM1-210	ENST00000490546	THUMPD2	Q9BTF0	503 aa	Known RBP	13.47	□□□□□ -0.25
PUM1-210	ENST00000490546	MYH16	Q9H6N6	1097 aa		13.47	□□□□□ -0.25
PUM1-210	ENST00000490546	LGR6	Q9HBX8	967 aa		13.47	□□□□□ -0.25
PUM1-210	ENST00000490546	ZNF521	Q96K83	1311 aa		13.46	□□□□□ -0.25
PUM1-210	ENST00000490546	ERVV-2	B6SEH9	535 aa		13.46	□□□□□ -0.25
PUM1-210	ENST00000490546	TAF7	Q15545	349 aa	Predicted RBP	13.46	□□□□□ -0.25
PUM1-210	ENST00000490546	RGS17	Q9UGC6	210 aa	Predicted RBP	13.46	□□□□□ -0.25
PUM1-210	ENST00000490546	VIRMA	Q69YN4	1812 aa	Known RBP	13.46	□□□□□ -0.26
PUM1-210	ENST00000490546	POTEA	Q6S8J7	498 aa		13.45	□□□□□ -0.26
PUM1-210	ENST00000490546	MARCH10	Q8NA82	808 aa	Predicted RBP	13.45	□□□□□ -0.26
PUM1-210	ENST00000490546	CFAP44	Q96MT7	982 aa		13.45	□□□□□ -0.26
PUM1-210	ENST00000490546	IFT57	Q9NWB7	429 aa		13.45	□□□□□ -0.26
PUM1-210	ENST00000490546	SLFN5	Q08AF3	891 aa		13.44	□□□□□ -0.26
PUM1-210	ENST00000490546	SLC52A2	Q9HAB3	445 aa		13.44	□□□□□ -0.26
PUM1-210	ENST00000490546	BABAM1	Q9NWV8	329 aa		13.44	□□□□□ -0.26
PUM1-210	ENST00000490546	SCN11A	Q9UI33	1791 aa		13.44	□□□□□ -0.26
PUM1-210	ENST00000490546	CEMIP	Q8WUJ3	1361 aa		13.44	□□□□□ -0.26
PUM1-210	ENST00000490546	THSD7A	Q9UPZ6	1657 aa		13.44	□□□□□ -0.26
PUM1-210	ENST00000490546	LRRC37A3	O60309	1634 aa		13.43	□□□□□ -0.26
PUM1-210	ENST00000490546	KRT27	Q7Z3Y8	459 aa		13.43	□□□□□ -0.26
PUM1-210	ENST00000490546	NFATC2IP	Q8NCF5	419 aa		13.43	□□□□□ -0.26
PUM1-210	ENST00000490546	SYTL4	Q96C24	671 aa	Predicted RBP	13.43	□□□□□ -0.26
PUM1-210	ENST00000490546	CDCA7L	Q96GN5	454 aa		13.43	□□□□□ -0.26
PUM1-210	ENST00000490546	SHANK3	Q9BYB0	1731 aa		13.43	□□□□□ -0.26
PUM1-210	ENST00000490546	TMOD3	Q9NYL9	352 aa		13.43	□□□□□ -0.26
PUM1-210	ENST00000490546	TSPYL4	Q9UJ04	414 aa		13.43	□□□□□ -0.26
PUM1-210	ENST00000490546	BTBD11	A6QL63	1104 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms