RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 KIF24Q5T7B8 1368 aa18.53■□□□□ 0.56
LMO4-203ENST00000489303 FLT4P35916 1363 aa18.52■□□□□ 0.55
LMO4-203ENST00000489303 PAPPAQ13219 1627 aa18.52■□□□□ 0.55
LMO4-203ENST00000489303 PPM1GO15355 546 aaPredicted RBP18.51■□□□□ 0.55
LMO4-203ENST00000489303 KCNQ4P56696 695 aa18.51■□□□□ 0.55
LMO4-203ENST00000489303 ZNF827Q17R98 1081 aa18.51■□□□□ 0.55
LMO4-203ENST00000489303 KNSTRNQ9Y448 316 aa18.51■□□□□ 0.55
LMO4-203ENST00000489303 KAT6BQ8WYB5 2073 aa18.51■□□□□ 0.55
LMO4-203ENST00000489303 KIF7Q2M1P5 1343 aa18.5■□□□□ 0.55
LMO4-203ENST00000489303 SHANK3Q9BYB0 1731 aa18.5■□□□□ 0.55
LMO4-203ENST00000489303 USHBP1Q8N6Y0 703 aa18.5■□□□□ 0.55
LMO4-203ENST00000489303 INSRP06213 1382 aa18.5■□□□□ 0.55
LMO4-203ENST00000489303 MEGF6O75095 1541 aa18.49■□□□□ 0.55
LMO4-203ENST00000489303 HSP90AB2PQ58FF8 381 aa18.49■□□□□ 0.55
LMO4-203ENST00000489303 NSD2O96028 1365 aa18.48■□□□□ 0.55
LMO4-203ENST00000489303 NBPF6Q5VWK0 638 aa18.48■□□□□ 0.55
LMO4-203ENST00000489303 NBPF4Q96M43 638 aa18.48■□□□□ 0.55
LMO4-203ENST00000489303 EMILIN1Q9Y6C2 1016 aa18.48■□□□□ 0.55
LMO4-203ENST00000489303 TNNT2P45379 298 aaPredicted RBP18.47■□□□□ 0.55
LMO4-203ENST00000489303 PRIM1P49642 420 aaKnown RBP18.46■□□□□ 0.55
LMO4-203ENST00000489303 MORC1Q86VD1 984 aa18.46■□□□□ 0.55
LMO4-203ENST00000489303 RAPGEF4Q8WZA2 1011 aa18.46■□□□□ 0.55
LMO4-203ENST00000489303 SGIP1Q9BQI5 828 aa18.46■□□□□ 0.55
LMO4-203ENST00000489303 DOT1LQ8TEK3 1739 aa18.46■□□□□ 0.55
LMO4-203ENST00000489303 YY1P25490 414 aa18.45■□□□□ 0.54
LMO4-203ENST00000489303 SYTL4Q96C24 671 aaPredicted RBP18.45■□□□□ 0.54
LMO4-203ENST00000489303 FHDC1Q9C0D6 1143 aaPredicted RBP18.44■□□□□ 0.54
LMO4-203ENST00000489303 POLKQ9UBT6 870 aa18.44■□□□□ 0.54
LMO4-203ENST00000489303 WASHC2AQ641Q2 1341 aa18.44■□□□□ 0.54
LMO4-203ENST00000489303 TATP17735 454 aaPredicted RBP18.43■□□□□ 0.54
LMO4-203ENST00000489303 ZCRB1Q8TBF4 217 aaKnown RBP18.43■□□□□ 0.54
LMO4-203ENST00000489303 MTFR1LQ9H019 292 aa18.43■□□□□ 0.54
LMO4-203ENST00000489303 AKT1S1Q96B36 256 aa18.42■□□□□ 0.54
LMO4-203ENST00000489303 SYT17Q9BSW7 474 aa18.42■□□□□ 0.54
LMO4-203ENST00000489303 TUBGCP6Q96RT7 1819 aa18.41■□□□□ 0.54
LMO4-203ENST00000489303 UTRNP46939 3433 aa18.38■□□□□ 0.53
LMO4-203ENST00000489303 LY75O60449 1722 aa18.38■□□□□ 0.53
LMO4-203ENST00000489303 PNPLA7Q6ZV29 1317 aa18.38■□□□□ 0.53
LMO4-203ENST00000489303 AMER1Q5JTC6 1135 aaPredicted RBP18.37■□□□□ 0.53
LMO4-203ENST00000489303 ANKRD26Q9UPS8 1709 aa18.37■□□□□ 0.53
LMO4-203ENST00000489303 ARXQ96QS3 562 aa18.36■□□□□ 0.53
LMO4-203ENST00000489303 EIF4A2Q14240 407 aaKnown RBP18.35■□□□□ 0.53
LMO4-203ENST00000489303 SLC27A3Q5K4L6 730 aa18.35■□□□□ 0.53
LMO4-203ENST00000489303 EYA1Q99502 592 aa18.35■□□□□ 0.53
LMO4-203ENST00000489303 PCDH11XQ9BZA7 1347 aa18.34■□□□□ 0.53
LMO4-203ENST00000489303 PCDH11YQ9BZA8 1340 aa18.34■□□□□ 0.53
LMO4-203ENST00000489303 PER1O15534 1290 aaPredicted RBP18.34■□□□□ 0.53
LMO4-203ENST00000489303 TFCP2L1Q9NZI6 479 aa18.34■□□□□ 0.53
LMO4-203ENST00000489303 MAP2P11137 1827 aaKnown RBP18.34■□□□□ 0.53
LMO4-203ENST00000489303 QSER1Q2KHR3 1735 aa18.33■□□□□ 0.52
LMO4-203ENST00000489303 TOGARAM1Q9Y4F4 1720 aa18.33■□□□□ 0.52
LMO4-203ENST00000489303 DCAF8L1A6NGE4 600 aa18.33■□□□□ 0.52
LMO4-203ENST00000489303 CYP27B1O15528 508 aa18.33■□□□□ 0.52
LMO4-203ENST00000489303 CC2D1BQ5T0F9 858 aaKnown RBP18.33■□□□□ 0.52
LMO4-203ENST00000489303 CCNL1Q9UK58 526 aaPredicted RBP18.33■□□□□ 0.52
LMO4-203ENST00000489303 SPG7Q9UQ90 795 aa18.33■□□□□ 0.52
LMO4-203ENST00000489303 KLHL34Q8N239 644 aa18.32■□□□□ 0.52
LMO4-203ENST00000489303 COL24A1Q17RW2 1714 aa18.3■□□□□ 0.52
LMO4-203ENST00000489303 MPRIPQ6WCQ1 1025 aa18.3■□□□□ 0.52
LMO4-203ENST00000489303 SMIM5Q71RC9 77 aa18.3■□□□□ 0.52
LMO4-203ENST00000489303 COL23A1Q86Y22 540 aaPredicted RBP18.3■□□□□ 0.52
LMO4-203ENST00000489303 NCAPD2Q15021 1401 aa18.3■□□□□ 0.52
LMO4-203ENST00000489303 NPC1L1Q9UHC9 1359 aa18.3■□□□□ 0.52
LMO4-203ENST00000489303 CNGB1Q14028 1251 aaPredicted RBP18.29■□□□□ 0.52
LMO4-203ENST00000489303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.29■□□□□ 0.52
LMO4-203ENST00000489303 IGSF1Q8N6C5 1336 aa18.28■□□□□ 0.52
LMO4-203ENST00000489303 AMIGO3Q86WK7 504 aa18.28■□□□□ 0.52
LMO4-203ENST00000489303 NLGN2Q8NFZ4 835 aa18.28■□□□□ 0.52
LMO4-203ENST00000489303 ITGB4P16144 1822 aa18.28■□□□□ 0.52
LMO4-203ENST00000489303 PKD1L3Q7Z443 1732 aa18.27■□□□□ 0.52
LMO4-203ENST00000489303 MTHFSP49914 203 aa18.27■□□□□ 0.52
LMO4-203ENST00000489303 MSL1Q68DK7 614 aa18.27■□□□□ 0.52
LMO4-203ENST00000489303 SLC16A10Q8TF71 515 aa18.27■□□□□ 0.52
LMO4-203ENST00000489303 C5P01031 1676 aa18.27■□□□□ 0.52
LMO4-203ENST00000489303 MSH5O43196 834 aa18.26■□□□□ 0.51
LMO4-203ENST00000489303 PALLDQ8WX93 1383 aa18.26■□□□□ 0.51
LMO4-203ENST00000489303 MAP3K5Q99683 1374 aa18.26■□□□□ 0.51
LMO4-203ENST00000489303 PLEKHG2Q9H7P9 1386 aa18.26■□□□□ 0.51
LMO4-203ENST00000489303 PLEKHO1Q53GL0 409 aaPredicted RBP18.25■□□□□ 0.51
LMO4-203ENST00000489303 IFNL2Q8IZJ0 200 aa18.25■□□□□ 0.51
LMO4-203ENST00000489303 ZNF784Q8NCA9 323 aaPredicted RBP18.25■□□□□ 0.51
LMO4-203ENST00000489303 TAF1LQ8IZX4 1826 aa18.25■□□□□ 0.51
LMO4-203ENST00000489303 POLD1P28340 1107 aa18.24■□□□□ 0.51
LMO4-203ENST00000489303 PIGBQ92521 554 aa18.24■□□□□ 0.51
LMO4-203ENST00000489303 IL13P35225 146 aa18.23■□□□□ 0.51
LMO4-203ENST00000489303 NKX1-1Q15270 411 aaPredicted RBP18.23■□□□□ 0.51
LMO4-203ENST00000489303 AMOTQ4VCS5 1084 aa18.23■□□□□ 0.51
LMO4-203ENST00000489303 GOLGB1Q14789 3259 aaKnown RBP18.22■□□□□ 0.51
LMO4-203ENST00000489303 DIAPH1O60610 1272 aaKnown RBP18.22■□□□□ 0.51
LMO4-203ENST00000489303 HMGB2P26583 209 aaKnown RBP18.22■□□□□ 0.51
LMO4-203ENST00000489303 GPR162Q16538 588 aa18.22■□□□□ 0.51
LMO4-203ENST00000489303 SULT6B1Q6IMI4 303 aa18.22■□□□□ 0.51
LMO4-203ENST00000489303 PELP1Q8IZL8 1130 aaKnown RBP18.22■□□□□ 0.51
LMO4-203ENST00000489303 HSP90AB1P08238 724 aaKnown RBP18.21■□□□□ 0.51
LMO4-203ENST00000489303 PHKG2P15735 406 aa18.21■□□□□ 0.51
LMO4-203ENST00000489303 CHD4Q14839 1912 aa18.2■□□□□ 0.5
LMO4-203ENST00000489303 C4BP0C0L5 1744 aa18.2■□□□□ 0.5
LMO4-203ENST00000489303 ZNF530Q6P9A1 599 aaPredicted RBP18.19■□□□□ 0.5
LMO4-203ENST00000489303 AEBP1Q8IUX7 1158 aa18.19■□□□□ 0.5
LMO4-203ENST00000489303 SMARCC1Q92922 1105 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms