RNA–Protein interactions for RNA: ENST00000488065.1

PITRM1-210, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 5

Gene PITRM1, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-210ENST00000488065 RRS1Q15050 365 aaKnown RBP13.74□□□□□ -0.21
PITRM1-210ENST00000488065 STRN4Q9NRL3 753 aa13.74□□□□□ -0.21
PITRM1-210ENST00000488065 USP54Q70EL1 1684 aa13.74□□□□□ -0.21
PITRM1-210ENST00000488065 SPATA31A1Q5TZJ5 1347 aa13.73□□□□□ -0.21
PITRM1-210ENST00000488065 AMPHP49418 695 aa13.73□□□□□ -0.21
PITRM1-210ENST00000488065 AATKQ6ZMQ8 1374 aa13.72□□□□□ -0.21
PITRM1-210ENST00000488065 UTRNP46939 3433 aa13.72□□□□□ -0.21
PITRM1-210ENST00000488065 USP35Q9P2H5 1018 aa13.72□□□□□ -0.21
PITRM1-210ENST00000488065 CAMTA1Q9Y6Y1 1673 aa13.72□□□□□ -0.21
PITRM1-210ENST00000488065 TRIM37O94972 964 aa13.71□□□□□ -0.21
PITRM1-210ENST00000488065 MTHFSP49914 203 aa13.71□□□□□ -0.21
PITRM1-210ENST00000488065 POLKQ9UBT6 870 aa13.71□□□□□ -0.21
PITRM1-210ENST00000488065 EMILIN1Q9Y6C2 1016 aa13.71□□□□□ -0.21
PITRM1-210ENST00000488065 NFAT5O94916 1531 aa13.7□□□□□ -0.22
PITRM1-210ENST00000488065 MAP3K19Q56UN5 1328 aa13.7□□□□□ -0.22
PITRM1-210ENST00000488065 ARHGEF25Q86VW2 580 aa13.7□□□□□ -0.22
PITRM1-210ENST00000488065 MIER1Q8N108 512 aa13.7□□□□□ -0.22
PITRM1-210ENST00000488065 CFAP53Q96M91 514 aa13.7□□□□□ -0.22
PITRM1-210ENST00000488065 LRRC37A3O60309 1634 aa13.7□□□□□ -0.22
PITRM1-210ENST00000488065 PARP4Q9UKK3 1724 aaKnown RBP13.7□□□□□ -0.22
PITRM1-210ENST00000488065 CPDO75976 1380 aa13.69□□□□□ -0.22
PITRM1-210ENST00000488065 WNK3Q9BYP7 1800 aa13.69□□□□□ -0.22
PITRM1-210ENST00000488065 POTEIP0CG38 1075 aa13.68□□□□□ -0.22
PITRM1-210ENST00000488065 CAMKK2Q96RR4 588 aa13.68□□□□□ -0.22
PITRM1-210ENST00000488065 HOXC9P31274 260 aa13.67□□□□□ -0.22
PITRM1-210ENST00000488065 IP6K1Q92551 441 aa13.67□□□□□ -0.22
PITRM1-210ENST00000488065 RTL1A6NKG5 1358 aa13.67□□□□□ -0.22
PITRM1-210ENST00000488065 FLT4P35916 1363 aa13.67□□□□□ -0.22
PITRM1-210ENST00000488065 KIF24Q5T7B8 1368 aa13.67□□□□□ -0.22
PITRM1-210ENST00000488065 PEAK1Q9H792 1746 aa13.67□□□□□ -0.22
PITRM1-210ENST00000488065 APBA3O96018 575 aa13.66□□□□□ -0.22
PITRM1-210ENST00000488065 LARP1Q6PKG0 1096 aaKnown RBP13.66□□□□□ -0.22
PITRM1-210ENST00000488065 COL5A2P05997 1499 aaPredicted RBP13.66□□□□□ -0.22
PITRM1-210ENST00000488065 SMG6Q86US8 1419 aaKnown RBP13.65□□□□□ -0.22
PITRM1-210ENST00000488065 MAP2P11137 1827 aaKnown RBP13.65□□□□□ -0.22
PITRM1-210ENST00000488065 EVA1CP58658 441 aa13.65□□□□□ -0.22
PITRM1-210ENST00000488065 HSP90AB2PQ58FF8 381 aa13.65□□□□□ -0.22
PITRM1-210ENST00000488065 LTV1Q96GA3 475 aaPredicted RBP13.65□□□□□ -0.22
PITRM1-210ENST00000488065 MRS2Q9HD23 443 aa13.65□□□□□ -0.22
PITRM1-210ENST00000488065 LTN1O94822 1766 aa13.65□□□□□ -0.22
PITRM1-210ENST00000488065 SBF2Q86WG5 1849 aa13.64□□□□□ -0.23
PITRM1-210ENST00000488065 CCER2I3L3R5 266 aa13.64□□□□□ -0.23
PITRM1-210ENST00000488065 DIAPH1O60610 1272 aaKnown RBP13.64□□□□□ -0.23
PITRM1-210ENST00000488065 CSB-PGBD3P0DP91 1061 aa13.64□□□□□ -0.23
PITRM1-210ENST00000488065 FAM196AQ6ZSG2 479 aa13.64□□□□□ -0.23
PITRM1-210ENST00000488065 INSRP06213 1382 aa13.63□□□□□ -0.23
PITRM1-210ENST00000488065 ANKRD24Q8TF21 1146 aa13.63□□□□□ -0.23
PITRM1-210ENST00000488065 NUDCQ9Y266 331 aa13.63□□□□□ -0.23
PITRM1-210ENST00000488065 AXIN2Q9Y2T1 843 aa13.63□□□□□ -0.23
PITRM1-210ENST00000488065 RGPD3A6NKT7 1758 aaPredicted RBP13.63□□□□□ -0.23
PITRM1-210ENST00000488065 RGPD4Q7Z3J3 1758 aa13.63□□□□□ -0.23
PITRM1-210ENST00000488065 CASZ1Q86V15 1759 aa13.62□□□□□ -0.23
PITRM1-210ENST00000488065 ABCC6O95255 1503 aa13.61□□□□□ -0.23
PITRM1-210ENST00000488065 U2SURPO15042 1029 aaKnown RBP13.61□□□□□ -0.23
PITRM1-210ENST00000488065 PDE3BQ13370 1112 aa13.61□□□□□ -0.23
PITRM1-210ENST00000488065 EIF4A2Q14240 407 aaKnown RBP13.61□□□□□ -0.23
PITRM1-210ENST00000488065 WDR43Q15061 677 aaKnown RBP eCLIP13.61□□□□□ -0.23
PITRM1-210ENST00000488065 CCDC184Q52MB2 194 aa13.61□□□□□ -0.23
PITRM1-210ENST00000488065 LHX8Q68G74 356 aa13.61□□□□□ -0.23
PITRM1-210ENST00000488065 BARGINQ6ZT62 677 aa13.61□□□□□ -0.23
PITRM1-210ENST00000488065 COL18A1P39060 1754 aa13.6□□□□□ -0.23
PITRM1-210ENST00000488065 TCP11L2Q8N4U5 519 aa13.6□□□□□ -0.23
PITRM1-210ENST00000488065 RGPD5Q99666 1765 aa13.6□□□□□ -0.23
PITRM1-210ENST00000488065 OVOS2A0A0G2JMS6 1433 aa13.59□□□□□ -0.23
PITRM1-210ENST00000488065 CRB1P82279 1406 aa13.59□□□□□ -0.23
PITRM1-210ENST00000488065 IL13P35225 146 aa13.59□□□□□ -0.23
PITRM1-210ENST00000488065 TOM1L2Q6ZVM7 507 aa13.59□□□□□ -0.23
PITRM1-210ENST00000488065 ZNF579Q8NAF0 562 aaKnown RBP13.59□□□□□ -0.23
PITRM1-210ENST00000488065 NLRP2Q9NX02 1062 aa13.59□□□□□ -0.23
PITRM1-210ENST00000488065 ERBB3P21860 1342 aa13.59□□□□□ -0.23
PITRM1-210ENST00000488065 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.24
PITRM1-210ENST00000488065 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.24
PITRM1-210ENST00000488065 ANO8Q9HCE9 1232 aaPredicted RBP13.58□□□□□ -0.24
PITRM1-210ENST00000488065 GOLGB1Q14789 3259 aaKnown RBP13.57□□□□□ -0.24
PITRM1-210ENST00000488065 COL3A1P02461 1466 aaPredicted RBP13.57□□□□□ -0.24
PITRM1-210ENST00000488065 PTF1AQ7RTS3 328 aa13.57□□□□□ -0.24
PITRM1-210ENST00000488065 WDR17Q8IZU2 1322 aa13.57□□□□□ -0.24
PITRM1-210ENST00000488065 MNX1P50219 401 aaPredicted RBP13.56□□□□□ -0.24
PITRM1-210ENST00000488065 FAM9BQ8IZU0 186 aa13.56□□□□□ -0.24
PITRM1-210ENST00000488065 NBPF6Q5VWK0 638 aa13.55□□□□□ -0.24
PITRM1-210ENST00000488065 NBPF4Q96M43 638 aa13.55□□□□□ -0.24
PITRM1-210ENST00000488065 EYA1Q99502 592 aa13.55□□□□□ -0.24
PITRM1-210ENST00000488065 HMOX1P09601 288 aa13.54□□□□□ -0.24
PITRM1-210ENST00000488065 YY1P25490 414 aa13.54□□□□□ -0.24
PITRM1-210ENST00000488065 SULT6B1Q6IMI4 303 aa13.54□□□□□ -0.24
PITRM1-210ENST00000488065 USHBP1Q8N6Y0 703 aa13.54□□□□□ -0.24
PITRM1-210ENST00000488065 PNISRQ8TF01 805 aaKnown RBP13.54□□□□□ -0.24
PITRM1-210ENST00000488065 CARD10Q9BWT7 1032 aa13.54□□□□□ -0.24
PITRM1-210ENST00000488065 PDGFDQ9GZP0 370 aaPredicted RBP13.54□□□□□ -0.24
PITRM1-210ENST00000488065 PNNQ9H307 717 aaKnown RBP13.54□□□□□ -0.24
PITRM1-210ENST00000488065 NEFMP07197 916 aa13.53□□□□□ -0.24
PITRM1-210ENST00000488065 CLCN6P51797 869 aa13.53□□□□□ -0.24
PITRM1-210ENST00000488065 NBPF14Q5TI25 921 aa13.53□□□□□ -0.24
PITRM1-210ENST00000488065 PPP1R1BQ9UD71 204 aaPredicted RBP13.53□□□□□ -0.24
PITRM1-210ENST00000488065 ADAMTS8Q9UP79 889 aa13.53□□□□□ -0.24
PITRM1-210ENST00000488065 THRAP3Q9Y2W1 955 aaKnown RBP13.53□□□□□ -0.24
PITRM1-210ENST00000488065 IGSF1Q8N6C5 1336 aa13.53□□□□□ -0.24
PITRM1-210ENST00000488065 GALR2O43603 387 aaPredicted RBP13.52□□□□□ -0.25
PITRM1-210ENST00000488065 PROM2Q8N271 834 aa13.52□□□□□ -0.25
PITRM1-210ENST00000488065 DCBLD2Q96PD2 775 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms