RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 ARID3CA6NKF2 412 aa8.87□□□□□ -0.99
PTEN-204ENST00000487939 CYP2U1Q7Z449 544 aa8.87□□□□□ -0.99
PTEN-204ENST00000487939 PLEKHM2Q8IWE5 1019 aa8.87□□□□□ -0.99
PTEN-204ENST00000487939 CDCA7Q9BWT1 371 aaPredicted RBP8.87□□□□□ -0.99
PTEN-204ENST00000487939 PPP1R12CQ9BZL4 782 aa8.87□□□□□ -0.99
PTEN-204ENST00000487939 TFIP11Q9UBB9 837 aaKnown RBP8.87□□□□□ -0.99
PTEN-204ENST00000487939 SERPINA10Q9UK55 444 aa8.87□□□□□ -0.99
PTEN-204ENST00000487939 PALM3A6NDB9 673 aaPredicted RBP8.86□□□□□ -0.99
PTEN-204ENST00000487939 ADH1AP07327 375 aa8.86□□□□□ -0.99
PTEN-204ENST00000487939 CBLBQ13191 982 aa8.86□□□□□ -0.99
PTEN-204ENST00000487939 SCARF1Q14162 830 aa8.86□□□□□ -0.99
PTEN-204ENST00000487939 TSGA10IPQ3SY00 556 aa8.86□□□□□ -0.99
PTEN-204ENST00000487939 TSEN34Q9BSV6 310 aaKnown RBP8.86□□□□□ -0.99
PTEN-204ENST00000487939 USP17L3A6NCW0 530 aa8.85□□□□□ -0.99
PTEN-204ENST00000487939 USP17L4A6NCW7 530 aa8.85□□□□□ -0.99
PTEN-204ENST00000487939 SCTRP47872 440 aa8.85□□□□□ -0.99
PTEN-204ENST00000487939 NCOA4Q13772 614 aa8.85□□□□□ -0.99
PTEN-204ENST00000487939 MRPL14Q6P1L8 145 aaKnown RBP8.85□□□□□ -0.99
PTEN-204ENST00000487939 USP17L2Q6R6M4 530 aa8.85□□□□□ -0.99
PTEN-204ENST00000487939 USP17L1Q7RTZ2 530 aa8.85□□□□□ -0.99
PTEN-204ENST00000487939 NOD1Q9Y239 953 aa8.85□□□□□ -0.99
PTEN-204ENST00000487939 MAFBQ9Y5Q3 323 aaPredicted RBP8.85□□□□□ -0.99
PTEN-204ENST00000487939 ADD1P35611 737 aaKnown RBP8.84□□□□□ -0.99
PTEN-204ENST00000487939 ATP13A2Q9NQ11 1180 aa8.84□□□□□ -0.99
PTEN-204ENST00000487939 ATP5J2-PTCD1G3V325 749 aa8.83□□□□□ -1
PTEN-204ENST00000487939 LCE2CQ5TA81 110 aa8.83□□□□□ -1
PTEN-204ENST00000487939 TRIM50Q86XT4 487 aa8.83□□□□□ -1
PTEN-204ENST00000487939 LINC00528Q8N1L1 170 aa8.83□□□□□ -1
PTEN-204ENST00000487939 DEPDC4Q8N2C3 294 aa8.83□□□□□ -1
PTEN-204ENST00000487939 OSBPL3Q9H4L5 887 aa8.83□□□□□ -1
PTEN-204ENST00000487939 SUPT5HO00267 1087 aaKnown RBP8.82□□□□□ -1
PTEN-204ENST00000487939 BMP2P12643 396 aa8.82□□□□□ -1
PTEN-204ENST00000487939 BMP1P13497 986 aa8.82□□□□□ -1
PTEN-204ENST00000487939 LMOD1P29536 600 aaPredicted RBP8.82□□□□□ -1
PTEN-204ENST00000487939 SENP2Q9HC62 589 aa8.82□□□□□ -1
PTEN-204ENST00000487939 GNRH1P01148 92 aa8.81□□□□□ -1
PTEN-204ENST00000487939 PTGIRP43119 386 aa8.81□□□□□ -1
PTEN-204ENST00000487939 RELBQ01201 579 aa8.81□□□□□ -1
PTEN-204ENST00000487939 TRIM46Q7Z4K8 759 aa8.81□□□□□ -1
PTEN-204ENST00000487939 CCDC82Q8N4S0 544 aa8.81□□□□□ -1
PTEN-204ENST00000487939 AGBL1Q96MI9 1066 aa8.81□□□□□ -1
PTEN-204ENST00000487939 ATP1A2P50993 1020 aa8.8□□□□□ -1
PTEN-204ENST00000487939 CFAP70Q5T0N1 1121 aa8.8□□□□□ -1
PTEN-204ENST00000487939 C6orf118Q5T5N4 469 aa8.8□□□□□ -1
PTEN-204ENST00000487939 KIFC2Q96AC6 838 aa8.8□□□□□ -1
PTEN-204ENST00000487939 MKRN1Q9UHC7 482 aaKnown RBP8.8□□□□□ -1
PTEN-204ENST00000487939 TERTO14746 1132 aaKnown RBP8.79□□□□□ -1
PTEN-204ENST00000487939 SPINT1O43278 529 aa8.79□□□□□ -1
PTEN-204ENST00000487939 GTF2IP78347 998 aa8.79□□□□□ -1
PTEN-204ENST00000487939 ESCO1Q5FWF5 840 aa8.79□□□□□ -1
PTEN-204ENST00000487939 PURBQ96QR8 312 aaKnown RBP8.79□□□□□ -1
PTEN-204ENST00000487939 C1orf115Q9H7X2 142 aa8.79□□□□□ -1
PTEN-204ENST00000487939 PSME1Q06323 249 aa8.78□□□□□ -1
PTEN-204ENST00000487939 ZFP42Q96MM3 310 aa8.78□□□□□ -1
PTEN-204ENST00000487939 ZNF395Q9H8N7 513 aaPredicted RBP8.78□□□□□ -1
PTEN-204ENST00000487939 VRTNQ9H8Y1 702 aa8.78□□□□□ -1
PTEN-204ENST00000487939 A0A1W2PRU2 124 aa8.77□□□□□ -1.01
PTEN-204ENST00000487939 KDF1Q8NAX2 398 aaPredicted RBP8.77□□□□□ -1.01
PTEN-204ENST00000487939 NLRP3Q96P20 1036 aa8.77□□□□□ -1.01
PTEN-204ENST00000487939 SNRPBP14678 240 aaKnown RBP8.76□□□□□ -1.01
PTEN-204ENST00000487939 RFX1P22670 979 aa8.76□□□□□ -1.01
PTEN-204ENST00000487939 CLN3Q13286 438 aa8.76□□□□□ -1.01
PTEN-204ENST00000487939 LARP1Q6PKG0 1096 aaKnown RBP8.76□□□□□ -1.01
PTEN-204ENST00000487939 TRIM47Q96LD4 638 aa8.76□□□□□ -1.01
PTEN-204ENST00000487939 ARHGEF10LQ9HCE6 1279 aa8.76□□□□□ -1.01
PTEN-204ENST00000487939 POLMQ9NP87 494 aaPredicted RBP8.76□□□□□ -1.01
PTEN-204ENST00000487939 DNAAF2Q9NVR5 837 aaKnown RBP8.76□□□□□ -1.01
PTEN-204ENST00000487939 RBM19Q9Y4C8 960 aaKnown RBP8.76□□□□□ -1.01
PTEN-204ENST00000487939 PCDHGA11Q9Y5H2 935 aa8.76□□□□□ -1.01
PTEN-204ENST00000487939 LOC100996750A0A140TA64 210 aa8.75□□□□□ -1.01
PTEN-204ENST00000487939 MEN1O00255 615 aa8.75□□□□□ -1.01
PTEN-204ENST00000487939 RASA1P20936 1047 aa8.75□□□□□ -1.01
PTEN-204ENST00000487939 GPC1P35052 558 aa8.75□□□□□ -1.01
PTEN-204ENST00000487939 KANK4Q5T7N3 995 aaPredicted RBP8.75□□□□□ -1.01
PTEN-204ENST00000487939 LARGE2Q8N3Y3 721 aa8.75□□□□□ -1.01
PTEN-204ENST00000487939 OGFOD1Q8N543 542 aa8.75□□□□□ -1.01
PTEN-204ENST00000487939 INSM2Q96T92 566 aaPredicted RBP8.75□□□□□ -1.01
PTEN-204ENST00000487939 KRTAP4-6Q9BYQ5 205 aa8.75□□□□□ -1.01
PTEN-204ENST00000487939 TTLL8A6PVC2 850 aa8.74□□□□□ -1.01
PTEN-204ENST00000487939 WASLO00401 505 aaPredicted RBP8.74□□□□□ -1.01
PTEN-204ENST00000487939 GDF10P55107 478 aa8.74□□□□□ -1.01
PTEN-204ENST00000487939 ESYT1Q9BSJ8 1104 aa8.74□□□□□ -1.01
PTEN-204ENST00000487939 CLDN10P78369 228 aa8.73□□□□□ -1.01
PTEN-204ENST00000487939 CNKSR1Q969H4 720 aa8.73□□□□□ -1.01
PTEN-204ENST00000487939 PBXIP1Q96AQ6 731 aa8.73□□□□□ -1.01
PTEN-204ENST00000487939 XAGE2Q96GT9 111 aa8.73□□□□□ -1.01
PTEN-204ENST00000487939 RAB6BQ9NRW1 208 aa8.73□□□□□ -1.01
PTEN-204ENST00000487939 SOS2Q07890 1332 aaPredicted RBP8.73□□□□□ -1.01
PTEN-204ENST00000487939 FAM196BA6NMK8 535 aa8.72□□□□□ -1.01
PTEN-204ENST00000487939 IL2RAP01589 272 aa8.72□□□□□ -1.01
PTEN-204ENST00000487939 INHAP05111 366 aa8.72□□□□□ -1.01
PTEN-204ENST00000487939 CTSOP43234 321 aaPredicted RBP8.72□□□□□ -1.01
PTEN-204ENST00000487939 RNF144AP50876 292 aaPredicted RBP8.72□□□□□ -1.01
PTEN-204ENST00000487939 SCNN1DP51172 638 aa8.72□□□□□ -1.01
PTEN-204ENST00000487939 CCDC102BQ68D86 513 aa8.72□□□□□ -1.01
PTEN-204ENST00000487939 SIX5Q8N196 739 aa8.72□□□□□ -1.01
PTEN-204ENST00000487939 TPCN2Q8NHX9 752 aa8.72□□□□□ -1.01
PTEN-204ENST00000487939 ETNK1Q9HBU6 452 aa8.72□□□□□ -1.01
PTEN-204ENST00000487939 USP17L15C9J2P7 530 aa8.71□□□□□ -1.02
PTEN-204ENST00000487939 USP17L10C9JJH3 530 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms