RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 PLEKHO1Q53GL0 409 aaPredicted RBP10.51□□□□□ -0.73
RBM28-206ENST00000487602 LARP1Q6PKG0 1096 aaKnown RBP10.51□□□□□ -0.73
RBM28-206ENST00000487602 WDR63Q8IWG1 891 aa10.51□□□□□ -0.73
RBM28-206ENST00000487602 WNK3Q9BYP7 1800 aa10.51□□□□□ -0.73
RBM28-206ENST00000487602 TATP17735 454 aaPredicted RBP10.5□□□□□ -0.73
RBM28-206ENST00000487602 GOLGA2Q08379 1002 aa10.5□□□□□ -0.73
RBM28-206ENST00000487602 LMOD3Q0VAK6 560 aa10.5□□□□□ -0.73
RBM28-206ENST00000487602 AMOTQ4VCS5 1084 aa10.5□□□□□ -0.73
RBM28-206ENST00000487602 RAPGEF4Q8WZA2 1011 aa10.5□□□□□ -0.73
RBM28-206ENST00000487602 RGPD2P0DJD1 1756 aa10.49□□□□□ -0.73
RBM28-206ENST00000487602 HTATSF1O43719 755 aaKnown RBP10.49□□□□□ -0.73
RBM28-206ENST00000487602 CDCA7LQ96GN5 454 aa10.49□□□□□ -0.73
RBM28-206ENST00000487602 NGLY1Q96IV0 654 aa10.49□□□□□ -0.73
RBM28-206ENST00000487602 CRB1P82279 1406 aa10.49□□□□□ -0.73
RBM28-206ENST00000487602 SLIT2O94813 1529 aa10.48□□□□□ -0.73
RBM28-206ENST00000487602 SLFN5Q08AF3 891 aa10.48□□□□□ -0.73
RBM28-206ENST00000487602 UNC5CLQ8IV45 518 aa10.48□□□□□ -0.73
RBM28-206ENST00000487602 TRMT2AQ8IZ69 625 aaKnown RBP10.48□□□□□ -0.73
RBM28-206ENST00000487602 FNBP4Q8N3X1 1017 aaPredicted RBP10.48□□□□□ -0.73
RBM28-206ENST00000487602 C8orf37Q96NL8 207 aa10.48□□□□□ -0.73
RBM28-206ENST00000487602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.48□□□□□ -0.737e-7■■■■□ 26.7
RBM28-206ENST00000487602 PLEKHG2Q9H7P9 1386 aa10.48□□□□□ -0.73
RBM28-206ENST00000487602 GNAT3A8MTJ3 354 aa10.47□□□□□ -0.73
RBM28-206ENST00000487602 E9PSI1 815 aa10.47□□□□□ -0.73
RBM28-206ENST00000487602 MEX3CQ5U5Q3 659 aaKnown RBP10.47□□□□□ -0.73
RBM28-206ENST00000487602 ZNF530Q6P9A1 599 aaPredicted RBP10.47□□□□□ -0.73
RBM28-206ENST00000487602 SPINK5Q9NQ38 1064 aaPredicted RBP10.47□□□□□ -0.73
RBM28-206ENST00000487602 SPG7Q9UQ90 795 aa10.47□□□□□ -0.73
RBM28-206ENST00000487602 IL16Q14005 1332 aa10.47□□□□□ -0.73
RBM28-206ENST00000487602 IL2RBP14784 551 aa10.46□□□□□ -0.73
RBM28-206ENST00000487602 CALD1Q05682 793 aaKnown RBP10.46□□□□□ -0.73
RBM28-206ENST00000487602 AKAP4Q5JQC9 854 aa10.46□□□□□ -0.73
RBM28-206ENST00000487602 RTF1Q92541 710 aaKnown RBP10.46□□□□□ -0.73
RBM28-206ENST00000487602 PARP4Q9UKK3 1724 aaKnown RBP10.46□□□□□ -0.74
RBM28-206ENST00000487602 MEGF6O75095 1541 aa10.45□□□□□ -0.74
RBM28-206ENST00000487602 SPATA31A1Q5TZJ5 1347 aa10.45□□□□□ -0.74
RBM28-206ENST00000487602 SPATA31A5Q5VU36 1347 aa10.45□□□□□ -0.74
RBM28-206ENST00000487602 SPATA31A7Q8IWB4 1347 aa10.45□□□□□ -0.74
RBM28-206ENST00000487602 DCTN1Q14203 1278 aa10.45□□□□□ -0.74
RBM28-206ENST00000487602 VPS72Q15906 364 aa10.45□□□□□ -0.74
RBM28-206ENST00000487602 DUSP27Q5VZP5 1158 aa10.45□□□□□ -0.74
RBM28-206ENST00000487602 ZCRB1Q8TBF4 217 aaKnown RBP10.45□□□□□ -0.74
RBM28-206ENST00000487602 USP35Q9P2H5 1018 aa10.45□□□□□ -0.74
RBM28-206ENST00000487602 THRAP3Q9Y2W1 955 aaKnown RBP10.45□□□□□ -0.74
RBM28-206ENST00000487602 BCL9LQ86UU0 1499 aa10.44□□□□□ -0.74
RBM28-206ENST00000487602 OVOS2A0A0G2JMS6 1433 aa10.44□□□□□ -0.74
RBM28-206ENST00000487602 MAP3K5Q99683 1374 aa10.44□□□□□ -0.74
RBM28-206ENST00000487602 GNAI1P63096 354 aa10.44□□□□□ -0.74
RBM28-206ENST00000487602 C1orf141Q5JVX7 400 aa10.44□□□□□ -0.74
RBM28-206ENST00000487602 MCM10Q7L590 875 aa10.44□□□□□ -0.74
RBM28-206ENST00000487602 IFNL2Q8IZJ0 200 aa10.44□□□□□ -0.74
RBM28-206ENST00000487602 IL17REQ8NFR9 667 aa10.44□□□□□ -0.74
RBM28-206ENST00000487602 THUMPD2Q9BTF0 503 aaKnown RBP10.44□□□□□ -0.74
RBM28-206ENST00000487602 CDCA7Q9BWT1 371 aaPredicted RBP10.44□□□□□ -0.74
RBM28-206ENST00000487602 MYH16Q9H6N6 1097 aa10.44□□□□□ -0.74
RBM28-206ENST00000487602 USP21Q9UK80 565 aa10.44□□□□□ -0.74
RBM28-206ENST00000487602 AFF2P51816 1311 aa10.43□□□□□ -0.74
RBM28-206ENST00000487602 ZNF853P0CG23 659 aa10.43□□□□□ -0.74
RBM28-206ENST00000487602 PHKG2P15735 406 aa10.43□□□□□ -0.74
RBM28-206ENST00000487602 CFAP44Q96MT7 982 aa10.43□□□□□ -0.74
RBM28-206ENST00000487602 IFT57Q9NWB7 429 aa10.43□□□□□ -0.74
RBM28-206ENST00000487602 CCDC9Q9Y3X0 531 aaKnown RBP10.43□□□□□ -0.74
RBM28-206ENST00000487602 DLG5Q8TDM6 1919 aa10.43□□□□□ -0.74
RBM28-206ENST00000487602 DISP2A7MBM2 1401 aa10.42□□□□□ -0.74
RBM28-206ENST00000487602 CYP27B1O15528 508 aa10.42□□□□□ -0.74
RBM28-206ENST00000487602 RNMTO43148 476 aaKnown RBP10.42□□□□□ -0.74
RBM28-206ENST00000487602 MPRIPQ6WCQ1 1025 aa10.42□□□□□ -0.74
RBM28-206ENST00000487602 BARGINQ6ZT62 677 aa10.42□□□□□ -0.74
RBM28-206ENST00000487602 LGR6Q9HBX8 967 aa10.42□□□□□ -0.74
RBM28-206ENST00000487602 CEMIPQ8WUJ3 1361 aa10.41□□□□□ -0.74
RBM28-206ENST00000487602 PCDH11XQ9BZA7 1347 aa10.41□□□□□ -0.74
RBM28-206ENST00000487602 PCDH11YQ9BZA8 1340 aa10.41□□□□□ -0.74
RBM28-206ENST00000487602 EXOC5O00471 708 aa10.41□□□□□ -0.74
RBM28-206ENST00000487602 CHL1O00533 1208 aa10.41□□□□□ -0.74
RBM28-206ENST00000487602 HSP90AB1P08238 724 aaKnown RBP10.41□□□□□ -0.74
RBM28-206ENST00000487602 LAS1LQ9Y4W2 734 aaKnown RBP10.41□□□□□ -0.74
RBM28-206ENST00000487602 PKD1L3Q7Z443 1732 aa10.41□□□□□ -0.74
RBM28-206ENST00000487602 FANCIQ9NVI1 1328 aa10.4□□□□□ -0.74
RBM28-206ENST00000487602 NKX1-1Q15270 411 aaPredicted RBP10.4□□□□□ -0.74
RBM28-206ENST00000487602 TAF7Q15545 349 aaPredicted RBP10.4□□□□□ -0.74
RBM28-206ENST00000487602 TSR2Q969E8 191 aaKnown RBP10.4□□□□□ -0.74
RBM28-206ENST00000487602 MBIPQ9NS73 344 aa10.4□□□□□ -0.74
RBM28-206ENST00000487602 BABAM1Q9NWV8 329 aa10.4□□□□□ -0.74
RBM28-206ENST00000487602 LRRC37A3O60309 1634 aa10.4□□□□□ -0.75
RBM28-206ENST00000487602 SLC4A2P04920 1241 aa10.39□□□□□ -0.75
RBM28-206ENST00000487602 EXOSC9Q06265 439 aaKnown RBP10.39□□□□□ -0.75
RBM28-206ENST00000487602 DDX54Q8TDD1 881 aaKnown RBP10.39□□□□□ -0.75
RBM28-206ENST00000487602 DCAF5Q96JK2 942 aa10.39□□□□□ -0.75
RBM28-206ENST00000487602 GJD4Q96KN9 370 aaPredicted RBP10.39□□□□□ -0.75
RBM28-206ENST00000487602 QTRT2Q9H974 415 aaKnown RBP10.39□□□□□ -0.75
RBM28-206ENST00000487602 TRPC5Q9UL62 973 aaPredicted RBP10.39□□□□□ -0.75
RBM28-206ENST00000487602 GLI3P10071 1580 aa10.39□□□□□ -0.75
RBM28-206ENST00000487602 SHANK3Q9BYB0 1731 aa10.38□□□□□ -0.75
RBM28-206ENST00000487602 THSD7AQ9UPZ6 1657 aa10.38□□□□□ -0.75
RBM28-206ENST00000487602 TEFQ10587 303 aa10.38□□□□□ -0.75
RBM28-206ENST00000487602 DDB1Q16531 1140 aa10.38□□□□□ -0.75
RBM28-206ENST00000487602 FAM98CQ17RN3 349 aaKnown RBP10.38□□□□□ -0.75
RBM28-206ENST00000487602 ATRNO75882 1429 aa10.38□□□□□ -0.75
RBM28-206ENST00000487602 ERVV-2B6SEH9 535 aa10.37□□□□□ -0.75
RBM28-206ENST00000487602 KDM6AO15550 1401 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms