RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 INSRP06213 1382 aa34.04■■■■□ 3.04
LIME1-206ENST00000487026 PRIM1P49642 420 aaKnown RBP34.04■■■■□ 3.04
LIME1-206ENST00000487026 EMILIN1Q9Y6C2 1016 aa34.04■■■■□ 3.04
LIME1-206ENST00000487026 SMG6Q86US8 1419 aaKnown RBP34.03■■■■□ 3.04
LIME1-206ENST00000487026 FLT4P35916 1363 aa34.02■■■■□ 3.04
LIME1-206ENST00000487026 LRRC4BQ9NT99 713 aa34.02■■■■□ 3.04
LIME1-206ENST00000487026 ATF5Q9Y2D1 282 aaPredicted RBP34.02■■■■□ 3.04
LIME1-206ENST00000487026 HSPA5P11021 654 aaKnown RBP34■■■■□ 3.03
LIME1-206ENST00000487026 RAPGEF4Q8WZA2 1011 aa34■■■■□ 3.03
LIME1-206ENST00000487026 PPM1GO15355 546 aaPredicted RBP33.99■■■■□ 3.03
LIME1-206ENST00000487026 EIF4G2P78344 907 aaKnown RBP eCLIP33.99■■■■□ 3.03
LIME1-206ENST00000487026 TATP17735 454 aaPredicted RBP33.98■■■■□ 3.03
LIME1-206ENST00000487026 SHANK3Q9BYB0 1731 aa33.97■■■■□ 3.03
LIME1-206ENST00000487026 ZNF827Q17R98 1081 aa33.96■■■■□ 3.03
LIME1-206ENST00000487026 CGNL1Q0VF96 1302 aa33.96■■■■□ 3.03
LIME1-206ENST00000487026 KIF24Q5T7B8 1368 aa33.96■■■■□ 3.03
LIME1-206ENST00000487026 PTGER2P43116 358 aa33.95■■■■□ 3.03
LIME1-206ENST00000487026 KCNQ4P56696 695 aa33.95■■■■□ 3.03
LIME1-206ENST00000487026 PAPPAQ13219 1627 aa33.93■■■■□ 3.02
LIME1-206ENST00000487026 DOT1LQ8TEK3 1739 aa33.93■■■■□ 3.02
LIME1-206ENST00000487026 NSD2O96028 1365 aa33.92■■■■□ 3.02
LIME1-206ENST00000487026 SLC27A3Q5K4L6 730 aa33.9■■■■□ 3.02
LIME1-206ENST00000487026 TNNT2P45379 298 aaPredicted RBP33.89■■■■□ 3.02
LIME1-206ENST00000487026 MTFR1LQ9H019 292 aa33.89■■■■□ 3.02
LIME1-206ENST00000487026 AKT1S1Q96B36 256 aa33.88■■■■□ 3.01
LIME1-206ENST00000487026 POLKQ9UBT6 870 aa33.88■■■■□ 3.01
LIME1-206ENST00000487026 WASHC2AQ641Q2 1341 aa33.87■■■■□ 3.01
LIME1-206ENST00000487026 PANK3Q9H999 370 aa33.87■■■■□ 3.01
LIME1-206ENST00000487026 PCDH11XQ9BZA7 1347 aa33.85■■■■□ 3.01
LIME1-206ENST00000487026 PCDH11YQ9BZA8 1340 aa33.85■■■■□ 3.01
LIME1-206ENST00000487026 MAP2P11137 1827 aaKnown RBP33.84■■■■□ 3.01
LIME1-206ENST00000487026 CYP27B1O15528 508 aa33.84■■■■□ 3.01
LIME1-206ENST00000487026 SGIP1Q9BQI5 828 aa33.83■■■■□ 3.01
LIME1-206ENST00000487026 EYA1Q99502 592 aa33.82■■■■□ 3
LIME1-206ENST00000487026 CCNL1Q9UK58 526 aaPredicted RBP33.81■■■■□ 3
LIME1-206ENST00000487026 TFCP2L1Q9NZI6 479 aa33.8■■■■□ 3
LIME1-206ENST00000487026 ANKRD26Q9UPS8 1709 aa33.79■■■■□ 3
LIME1-206ENST00000487026 FHDC1Q9C0D6 1143 aaPredicted RBP33.79■■■■□ 3
LIME1-206ENST00000487026 DCAF8L1A6NGE4 600 aa33.78■■■■□ 3
LIME1-206ENST00000487026 MPRIPQ6WCQ1 1025 aa33.78■■■■□ 3
LIME1-206ENST00000487026 LY75O60449 1722 aa33.78■■■■□ 3
LIME1-206ENST00000487026 PNPLA7Q6ZV29 1317 aa33.78■■■■□ 3
LIME1-206ENST00000487026 NCAPD2Q15021 1401 aa33.77■■■■□ 3
LIME1-206ENST00000487026 SYT17Q9BSW7 474 aa33.76■■■□□ 2.99
LIME1-206ENST00000487026 EIF4A2Q14240 407 aaKnown RBP33.75■■■□□ 2.99
LIME1-206ENST00000487026 ARXQ96QS3 562 aa33.74■■■□□ 2.99
LIME1-206ENST00000487026 SPG7Q9UQ90 795 aa33.74■■■□□ 2.99
LIME1-206ENST00000487026 PKD1L3Q7Z443 1732 aa33.7■■■□□ 2.99
LIME1-206ENST00000487026 YY1P25490 414 aa33.7■■■□□ 2.99
LIME1-206ENST00000487026 SLC16A10Q8TF71 515 aa33.7■■■□□ 2.99
LIME1-206ENST00000487026 TUBGCP6Q96RT7 1819 aa33.69■■■□□ 2.98
LIME1-206ENST00000487026 TOGARAM1Q9Y4F4 1720 aa33.68■■■□□ 2.98
LIME1-206ENST00000487026 NKX1-1Q15270 411 aaPredicted RBP33.68■■■□□ 2.98
LIME1-206ENST00000487026 PALLDQ8WX93 1383 aa33.68■■■□□ 2.98
LIME1-206ENST00000487026 QSER1Q2KHR3 1735 aa33.67■■■□□ 2.98
LIME1-206ENST00000487026 MORC1Q86VD1 984 aa33.67■■■□□ 2.98
LIME1-206ENST00000487026 PIGBQ92521 554 aa33.67■■■□□ 2.98
LIME1-206ENST00000487026 MSH5O43196 834 aa33.66■■■□□ 2.98
LIME1-206ENST00000487026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.66■■■□□ 2.98
LIME1-206ENST00000487026 ITGB4P16144 1822 aa33.65■■■□□ 2.98
LIME1-206ENST00000487026 COL23A1Q86Y22 540 aaPredicted RBP33.64■■■□□ 2.98
LIME1-206ENST00000487026 KNSTRNQ9Y448 316 aa33.64■■■□□ 2.98
LIME1-206ENST00000487026 POLD1P28340 1107 aa33.63■■■□□ 2.97
LIME1-206ENST00000487026 PHKG2P15735 406 aa33.62■■■□□ 2.97
LIME1-206ENST00000487026 IFNL2Q8IZJ0 200 aa33.62■■■□□ 2.97
LIME1-206ENST00000487026 KLHL34Q8N239 644 aa33.62■■■□□ 2.97
LIME1-206ENST00000487026 SMARCC1Q92922 1105 aaPredicted RBP33.62■■■□□ 2.97
LIME1-206ENST00000487026 KIF7Q2M1P5 1343 aa33.59■■■□□ 2.97
LIME1-206ENST00000487026 IGSF1Q8N6C5 1336 aa33.59■■■□□ 2.97
LIME1-206ENST00000487026 TMOD3Q9NYL9 352 aa33.58■■■□□ 2.97
LIME1-206ENST00000487026 C5P01031 1676 aa33.58■■■□□ 2.97
LIME1-206ENST00000487026 MSL1Q68DK7 614 aa33.55■■■□□ 2.96
LIME1-206ENST00000487026 ASAP1Q9ULH1 1129 aa33.55■■■□□ 2.96
LIME1-206ENST00000487026 MAP3K5Q99683 1374 aa33.55■■■□□ 2.96
LIME1-206ENST00000487026 UTRNP46939 3433 aa33.54■■■□□ 2.96
LIME1-206ENST00000487026 COL24A1Q17RW2 1714 aa33.53■■■□□ 2.96
LIME1-206ENST00000487026 AMER1Q5JTC6 1135 aaPredicted RBP33.53■■■□□ 2.96
LIME1-206ENST00000487026 AEBP1Q8IUX7 1158 aa33.53■■■□□ 2.96
LIME1-206ENST00000487026 TAF1LQ8IZX4 1826 aa33.53■■■□□ 2.96
LIME1-206ENST00000487026 SMIM5Q71RC9 77 aa33.52■■■□□ 2.96
LIME1-206ENST00000487026 LOC102724428A0A0B4J2F2 783 aa33.51■■■□□ 2.95
LIME1-206ENST00000487026 SIK1P57059 783 aa33.51■■■□□ 2.95
LIME1-206ENST00000487026 PLEKHO1Q53GL0 409 aaPredicted RBP33.51■■■□□ 2.95
LIME1-206ENST00000487026 AMIGO3Q86WK7 504 aa33.51■■■□□ 2.95
LIME1-206ENST00000487026 HMGB2P26583 209 aaKnown RBP33.5■■■□□ 2.95
LIME1-206ENST00000487026 AK7Q96M32 723 aa33.5■■■□□ 2.95
LIME1-206ENST00000487026 FLAD1Q8NFF5 587 aa33.49■■■□□ 2.95
LIME1-206ENST00000487026 ATG3Q9NT62 314 aa33.49■■■□□ 2.95
LIME1-206ENST00000487026 C4BP0C0L5 1744 aa33.48■■■□□ 2.95
LIME1-206ENST00000487026 LINC00116Q8NCU8 138 aa33.48■■■□□ 2.95
LIME1-206ENST00000487026 ZNF530Q6P9A1 599 aaPredicted RBP33.47■■■□□ 2.95
LIME1-206ENST00000487026 NLGN2Q8NFZ4 835 aa33.47■■■□□ 2.95
LIME1-206ENST00000487026 PHF14O94880 888 aa33.46■■■□□ 2.95
LIME1-206ENST00000487026 ITPK1Q13572 414 aa33.46■■■□□ 2.95
LIME1-206ENST00000487026 GPR162Q16538 588 aa33.46■■■□□ 2.95
LIME1-206ENST00000487026 SULT6B1Q6IMI4 303 aa33.46■■■□□ 2.95
LIME1-206ENST00000487026 IL13P35225 146 aa33.45■■■□□ 2.95
LIME1-206ENST00000487026 ATP6V1AP38606 617 aa33.45■■■□□ 2.95
LIME1-206ENST00000487026 PLEKHG2Q9H7P9 1386 aa33.45■■■□□ 2.94
LIME1-206ENST00000487026 AMOTQ4VCS5 1084 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms