RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 GSK3AP49840 483 aa7.95□□□□□ -1.14
R3HDM1-217ENST00000486532 BRPF1P55201 1214 aaPredicted RBP7.95□□□□□ -1.14
R3HDM1-217ENST00000486532 CC2D2BQ6DHV5 1058 aa7.95□□□□□ -1.14
R3HDM1-217ENST00000486532 CNTNAP3BQ96NU0 1288 aa7.95□□□□□ -1.14
R3HDM1-217ENST00000486532 COL25A1Q9BXS0 654 aaPredicted RBP7.95□□□□□ -1.14
R3HDM1-217ENST00000486532 CNTNAP3Q9BZ76 1288 aa7.95□□□□□ -1.14
R3HDM1-217ENST00000486532 GIGYF1O75420 1035 aaPredicted RBP7.94□□□□□ -1.14
R3HDM1-217ENST00000486532 FOXR1Q6PIV2 292 aa7.94□□□□□ -1.14
R3HDM1-217ENST00000486532 CYP2U1Q7Z449 544 aa7.94□□□□□ -1.14
R3HDM1-217ENST00000486532 FOXD4L5Q5VV16 416 aaPredicted RBP7.93□□□□□ -1.14
R3HDM1-217ENST00000486532 VWA5B2Q8N398 1253 aa7.93□□□□□ -1.14
R3HDM1-217ENST00000486532 TMEM151AQ8N4L1 468 aa7.93□□□□□ -1.14
R3HDM1-217ENST00000486532 NLRP3Q96P20 1036 aa7.93□□□□□ -1.14
R3HDM1-217ENST00000486532 ERVK-9P63128 1117 aa7.92□□□□□ -1.14
R3HDM1-217ENST00000486532 GPR161Q8N6U8 529 aaKnown RBP7.92□□□□□ -1.14
R3HDM1-217ENST00000486532 H7C1W4 665 aa7.91□□□□□ -1.14
R3HDM1-217ENST00000486532 MEN1O00255 615 aa7.9□□□□□ -1.14
R3HDM1-217ENST00000486532 GDF11O95390 407 aa7.9□□□□□ -1.14
R3HDM1-217ENST00000486532 SLC27A3Q5K4L6 730 aa7.9□□□□□ -1.14
R3HDM1-217ENST00000486532 PRICKLE2Q7Z3G6 844 aa7.9□□□□□ -1.14
R3HDM1-217ENST00000486532 SVOPQ8N4V2 548 aa7.9□□□□□ -1.14
R3HDM1-217ENST00000486532 KDF1Q8NAX2 398 aaPredicted RBP7.9□□□□□ -1.14
R3HDM1-217ENST00000486532 SENP3-EIF4A1A0A087X0R7 540 aa7.89□□□□□ -1.15
R3HDM1-217ENST00000486532 MYCP01106 439 aaPredicted RBP7.89□□□□□ -1.15
R3HDM1-217ENST00000486532 SLURP2P0DP57 97 aa7.89□□□□□ -1.15
R3HDM1-217ENST00000486532 KRT76Q01546 638 aa7.89□□□□□ -1.15
R3HDM1-217ENST00000486532 RASSF7Q02833 373 aa7.89□□□□□ -1.15
R3HDM1-217ENST00000486532 WDR44Q5JSH3 913 aa7.89□□□□□ -1.15
R3HDM1-217ENST00000486532 PCDHB11Q9Y5F2 797 aa7.89□□□□□ -1.15
R3HDM1-217ENST00000486532 A0A1W2PRU2 124 aa7.88□□□□□ -1.15
R3HDM1-217ENST00000486532 GTF2E1P29083 439 aaPredicted RBP7.88□□□□□ -1.15
R3HDM1-217ENST00000486532 SRSF11Q05519 484 aaKnown RBP7.88□□□□□ -1.15
R3HDM1-217ENST00000486532 CLN3Q13286 438 aa7.88□□□□□ -1.15
R3HDM1-217ENST00000486532 DYRK1BQ9Y463 629 aa7.88□□□□□ -1.15
R3HDM1-217ENST00000486532 GNRH1P01148 92 aa7.87□□□□□ -1.15
R3HDM1-217ENST00000486532 EIF4G2P78344 907 aaKnown RBP eCLIP7.87□□□□□ -1.15
R3HDM1-217ENST00000486532 MAP3K10Q02779 954 aa7.87□□□□□ -1.15
R3HDM1-217ENST00000486532 TRIM22Q8IYM9 498 aa7.87□□□□□ -1.15
R3HDM1-217ENST00000486532 MTMR14Q8NCE2 650 aa7.87□□□□□ -1.15
R3HDM1-217ENST00000486532 ENAMQ9NRM1 1142 aa7.87□□□□□ -1.15
R3HDM1-217ENST00000486532 ADAMTS8Q9UP79 889 aa7.87□□□□□ -1.15
R3HDM1-217ENST00000486532 TRERF1Q96PN7 1200 aa7.86□□□□□ -1.15
R3HDM1-217ENST00000486532 NSFL1CQ9UNZ2 370 aaKnown RBP7.86□□□□□ -1.15
R3HDM1-217ENST00000486532 SPATA31C2B4DYI2 1134 aa7.85□□□□□ -1.15
R3HDM1-217ENST00000486532 MARSP56192 900 aaKnown RBP7.85□□□□□ -1.15
R3HDM1-217ENST00000486532 RNFT1Q5M7Z0 435 aa7.85□□□□□ -1.15
R3HDM1-217ENST00000486532 SIRT1Q96EB6 747 aa7.85□□□□□ -1.15
R3HDM1-217ENST00000486532 TRAK2O60296 914 aa7.84□□□□□ -1.15
R3HDM1-217ENST00000486532 ADAMTS2O95450 1211 aa7.84□□□□□ -1.15
R3HDM1-217ENST00000486532 RHOQP17081 205 aa7.84□□□□□ -1.15
R3HDM1-217ENST00000486532 ESCO1Q5FWF5 840 aa7.84□□□□□ -1.15
R3HDM1-217ENST00000486532 ZNF385CQ66K41 422 aaPredicted RBP7.84□□□□□ -1.15
R3HDM1-217ENST00000486532 RIPOR1Q6ZS17 1223 aa7.84□□□□□ -1.15
R3HDM1-217ENST00000486532 TAS1R3Q7RTX0 852 aa7.84□□□□□ -1.15
R3HDM1-217ENST00000486532 SCARF2Q96GP6 870 aaPredicted RBP7.84□□□□□ -1.15
R3HDM1-217ENST00000486532 GRIP2Q9C0E4 1043 aa7.84□□□□□ -1.15
R3HDM1-217ENST00000486532 MBIPQ9NS73 344 aa7.84□□□□□ -1.15
R3HDM1-217ENST00000486532 TPRNQ4KMQ1 711 aa7.83□□□□□ -1.16
R3HDM1-217ENST00000486532 SNRKQ9NRH2 765 aa7.83□□□□□ -1.16
R3HDM1-217ENST00000486532 CEP126Q9P2H0 1117 aa7.83□□□□□ -1.16
R3HDM1-217ENST00000486532 WASLO00401 505 aaPredicted RBP7.82□□□□□ -1.16
R3HDM1-217ENST00000486532 IGHA1P01876 353 aa7.82□□□□□ -1.16
R3HDM1-217ENST00000486532 POU4F2Q12837 409 aa7.82□□□□□ -1.16
R3HDM1-217ENST00000486532 USP4Q13107 963 aa7.82□□□□□ -1.16
R3HDM1-217ENST00000486532 KANK3Q6NY19 840 aa7.82□□□□□ -1.16
R3HDM1-217ENST00000486532 NBPF10Q6P3W6 841 aaKnown RBP7.82□□□□□ -1.16
R3HDM1-217ENST00000486532 NBPF15Q8N660 670 aa7.82□□□□□ -1.16
R3HDM1-217ENST00000486532 ZNF837Q96EG3 531 aaPredicted RBP7.82□□□□□ -1.16
R3HDM1-217ENST00000486532 GAS2L1Q99501 681 aaPredicted RBP7.82□□□□□ -1.16
R3HDM1-217ENST00000486532 ESYT1Q9BSJ8 1104 aa7.82□□□□□ -1.16
R3HDM1-217ENST00000486532 OSBPL3Q9H4L5 887 aa7.82□□□□□ -1.16
R3HDM1-217ENST00000486532 ARHGEF10LQ9HCE6 1279 aa7.82□□□□□ -1.16
R3HDM1-217ENST00000486532 F11P03951 625 aa7.81□□□□□ -1.16
R3HDM1-217ENST00000486532 SLFNL1Q499Z3 407 aa7.81□□□□□ -1.16
R3HDM1-217ENST00000486532 TIMMDC1Q9NPL8 285 aa7.81□□□□□ -1.16
R3HDM1-217ENST00000486532 ARHGEF15O94989 841 aa7.8□□□□□ -1.16
R3HDM1-217ENST00000486532 SCTRP47872 440 aa7.8□□□□□ -1.16
R3HDM1-217ENST00000486532 WASHC4Q2M389 1173 aa7.8□□□□□ -1.16
R3HDM1-217ENST00000486532 GNASQ5JWF2 1037 aa7.8□□□□□ -1.16
R3HDM1-217ENST00000486532 CNKSR1Q969H4 720 aa7.8□□□□□ -1.16
R3HDM1-217ENST00000486532 ZSCAN10Q96SZ4 725 aaPredicted RBP7.8□□□□□ -1.16
R3HDM1-217ENST00000486532 PHF24Q9UPV7 400 aa7.8□□□□□ -1.16
R3HDM1-217ENST00000486532 DNMT3AQ9Y6K1 912 aaPredicted RBP7.8□□□□□ -1.16
R3HDM1-217ENST00000486532 GPR37L1O60883 481 aa7.79□□□□□ -1.16
R3HDM1-217ENST00000486532 LBRQ14739 615 aaKnown RBP7.79□□□□□ -1.16
R3HDM1-217ENST00000486532 LRRC4BQ9NT99 713 aa7.79□□□□□ -1.16
R3HDM1-217ENST00000486532 CUEDC1Q9NWM3 386 aaPredicted RBP7.79□□□□□ -1.16
R3HDM1-217ENST00000486532 DOLKQ9UPQ8 538 aa7.79□□□□□ -1.16
R3HDM1-217ENST00000486532 A0A1B0GTH6 734 aa7.78□□□□□ -1.16
R3HDM1-217ENST00000486532 SOX11P35716 441 aa7.78□□□□□ -1.16
R3HDM1-217ENST00000486532 CENPCQ03188 943 aa7.78□□□□□ -1.16
R3HDM1-217ENST00000486532 GAS6Q14393 721 aa7.78□□□□□ -1.16
R3HDM1-217ENST00000486532 DBN1Q16643 649 aa7.78□□□□□ -1.16
R3HDM1-217ENST00000486532 RNF135Q8IUD6 432 aa7.78□□□□□ -1.16
R3HDM1-217ENST00000486532 NUCKS1Q9H1E3 243 aaKnown RBP7.78□□□□□ -1.16
R3HDM1-217ENST00000486532 TBC1D2BQ9UPU7 963 aa7.78□□□□□ -1.16
R3HDM1-217ENST00000486532 IGF1RP08069 1367 aa7.77□□□□□ -1.17
R3HDM1-217ENST00000486532 PHF20L1A8MW92 1017 aa7.77□□□□□ -1.17
R3HDM1-217ENST00000486532 CELA2BP08218 269 aaPredicted RBP7.77□□□□□ -1.17
R3HDM1-217ENST00000486532 MX2P20592 715 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms