RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 TMEM132AQ24JP5 1023 aa10.35□□□□□ -0.75
GABRE-209ENST00000486255 ADGBQ8N7X0 1667 aa10.35□□□□□ -0.75
GABRE-209ENST00000486255 SYCP2Q9BX26 1530 aa10.35□□□□□ -0.75
GABRE-209ENST00000486255 KRT18P05783 430 aaKnown RBP10.35□□□□□ -0.75
GABRE-209ENST00000486255 RNF187Q5TA31 235 aaPredicted RBP10.35□□□□□ -0.75
GABRE-209ENST00000486255 IPO4Q8TEX9 1081 aaKnown RBP10.35□□□□□ -0.75
GABRE-209ENST00000486255 TANGO6Q9C0B7 1094 aa10.35□□□□□ -0.75
GABRE-209ENST00000486255 STIM1Q13586 685 aa10.35□□□□□ -0.75
GABRE-209ENST00000486255 JAKMIP3Q5VZ66 844 aa10.35□□□□□ -0.75
GABRE-209ENST00000486255 COG3Q96JB2 828 aa10.35□□□□□ -0.75
GABRE-209ENST00000486255 ASXL2Q76L83 1435 aa10.35□□□□□ -0.75
GABRE-209ENST00000486255 ST20-MTHFSA0A0A6YYL1 179 aa10.34□□□□□ -0.75
GABRE-209ENST00000486255 RIPK4P57078 832 aa10.34□□□□□ -0.75
GABRE-209ENST00000486255 CRACR2AQ9BSW2 395 aa10.34□□□□□ -0.75
GABRE-209ENST00000486255 SAMD1Q6SPF0 538 aaPredicted RBP10.34□□□□□ -0.75
GABRE-209ENST00000486255 UBXN4Q92575 508 aa10.34□□□□□ -0.75
GABRE-209ENST00000486255 TEFQ10587 303 aa10.34□□□□□ -0.75
GABRE-209ENST00000486255 WWC2Q6AWC2 1192 aa10.34□□□□□ -0.75
GABRE-209ENST00000486255 ARHGEF5Q12774 1597 aa10.34□□□□□ -0.75
GABRE-209ENST00000486255 FKBP5Q13451 457 aaPredicted RBP10.34□□□□□ -0.75
GABRE-209ENST00000486255 KIAA1328Q86T90 577 aa10.34□□□□□ -0.75
GABRE-209ENST00000486255 NEK4P51957 841 aa10.34□□□□□ -0.75
GABRE-209ENST00000486255 PANK1Q8TE04 598 aa10.34□□□□□ -0.75
GABRE-209ENST00000486255 TRERF1Q96PN7 1200 aa10.34□□□□□ -0.75
GABRE-209ENST00000486255 PAF1Q8N7H5 531 aa10.33□□□□□ -0.76
GABRE-209ENST00000486255 SART3Q15020 963 aaKnown RBP10.33□□□□□ -0.76
GABRE-209ENST00000486255 MAP9Q49MG5 647 aa10.33□□□□□ -0.76
GABRE-209ENST00000486255 FSD1Q9BTV5 496 aa10.33□□□□□ -0.76
GABRE-209ENST00000486255 STAMBPO95630 424 aa10.33□□□□□ -0.76
GABRE-209ENST00000486255 TNNT1P13805 278 aa10.33□□□□□ -0.76
GABRE-209ENST00000486255 MCM3P25205 808 aa10.33□□□□□ -0.76
GABRE-209ENST00000486255 GTF2A1P52655 376 aaPredicted RBP10.33□□□□□ -0.76
GABRE-209ENST00000486255 SPATA24Q86W54 205 aa10.33□□□□□ -0.76
GABRE-209ENST00000486255 TAF4BQ92750 862 aa10.33□□□□□ -0.76
GABRE-209ENST00000486255 RUNDC1Q96C34 613 aa10.33□□□□□ -0.76
GABRE-209ENST00000486255 RTEL1-TNFRSF6BF6WH68 1400 aa10.33□□□□□ -0.76
GABRE-209ENST00000486255 NEUROD6Q96NK8 337 aa10.33□□□□□ -0.76
GABRE-209ENST00000486255 MTMR7Q9Y216 660 aa10.33□□□□□ -0.76
GABRE-209ENST00000486255 K7ELQ4 463 aaPredicted RBP10.32□□□□□ -0.76
GABRE-209ENST00000486255 ATP2B1P20020 1258 aa10.32□□□□□ -0.76
GABRE-209ENST00000486255 JMYQ8N9B5 988 aa10.32□□□□□ -0.76
GABRE-209ENST00000486255 PDCL3Q9H2J4 239 aa10.32□□□□□ -0.76
GABRE-209ENST00000486255 ZSCAN30Q86W11 494 aa10.32□□□□□ -0.76
GABRE-209ENST00000486255 WDR33Q9C0J8 1336 aaKnown RBP10.32□□□□□ -0.76
GABRE-209ENST00000486255 HIP1O00291 1037 aa10.32□□□□□ -0.76
GABRE-209ENST00000486255 ADCY10Q96PN6 1610 aa10.32□□□□□ -0.76
GABRE-209ENST00000486255 SEPT11Q9NVA2 429 aaKnown RBP10.32□□□□□ -0.76
GABRE-209ENST00000486255 SMTNL1A8MU46 457 aa10.32□□□□□ -0.76
GABRE-209ENST00000486255 POLR3GO15318 223 aaPredicted RBP10.32□□□□□ -0.76
GABRE-209ENST00000486255 EPB41L2O43491 1005 aaKnown RBP10.32□□□□□ -0.76
GABRE-209ENST00000486255 UBE2Q2Q8WVN8 375 aa10.32□□□□□ -0.76
GABRE-209ENST00000486255 ZHX1Q9UKY1 873 aaPredicted RBP10.32□□□□□ -0.76
GABRE-209ENST00000486255 ABCC10Q5T3U5 1492 aa10.31□□□□□ -0.76
GABRE-209ENST00000486255 DIAPH1O60610 1272 aaKnown RBP10.31□□□□□ -0.76
GABRE-209ENST00000486255 TRAK1Q9UPV9 953 aa10.31□□□□□ -0.76
GABRE-209ENST00000486255 CCDC113Q9H0I3 377 aa10.31□□□□□ -0.76
GABRE-209ENST00000486255 DENND4BO75064 1496 aaPredicted RBP10.31□□□□□ -0.76
GABRE-209ENST00000486255 KIF2AO00139 706 aaPredicted RBP10.31□□□□□ -0.76
GABRE-209ENST00000486255 RPGRIP1LQ68CZ1 1315 aa10.31□□□□□ -0.76
GABRE-209ENST00000486255 GTF2F1P35269 517 aaKnown RBP eCLIP10.31□□□□□ -0.76
GABRE-209ENST00000486255 ME1P48163 572 aa10.31□□□□□ -0.76
GABRE-209ENST00000486255 FILIP1Q7Z7B0 1213 aa10.31□□□□□ -0.76
GABRE-209ENST00000486255 PPM1EQ8WY54 764 aa10.31□□□□□ -0.76
GABRE-209ENST00000486255 PDZRN3Q9UPQ7 1066 aa10.3□□□□□ -0.76
GABRE-209ENST00000486255 DHX29Q7Z478 1369 aaKnown RBP10.3□□□□□ -0.76
GABRE-209ENST00000486255 PTPN14Q15678 1187 aa10.3□□□□□ -0.76
GABRE-209ENST00000486255 NUP62CLQ9H1M0 184 aa10.3□□□□□ -0.76
GABRE-209ENST00000486255 KRT85P78386 507 aa10.3□□□□□ -0.76
GABRE-209ENST00000486255 ZNF518AQ6AHZ1 1483 aa10.3□□□□□ -0.76
GABRE-209ENST00000486255 PPP4R3BQ5MIZ7 849 aa10.3□□□□□ -0.76
GABRE-209ENST00000486255 UBTFL1P0CB47 393 aaPredicted RBP10.29□□□□□ -0.76
GABRE-209ENST00000486255 STK3Q13188 491 aa10.29□□□□□ -0.76
GABRE-209ENST00000486255 ANKRD1Q15327 319 aa10.29□□□□□ -0.76
GABRE-209ENST00000486255 UPF3BQ9BZI7 483 aaKnown RBP10.29□□□□□ -0.76
GABRE-209ENST00000486255 EVC2Q86UK5 1308 aa10.29□□□□□ -0.76
GABRE-209ENST00000486255 GCOM1H8Y6P7 765 aaPredicted RBP10.29□□□□□ -0.76
GABRE-209ENST00000486255 MYZAPP0CAP1 466 aa10.29□□□□□ -0.76
GABRE-209ENST00000486255 GNAI1P63096 354 aa10.29□□□□□ -0.76
GABRE-209ENST00000486255 BCCIPQ9P287 314 aaKnown RBP eCLIP10.29□□□□□ -0.76
GABRE-209ENST00000486255 TSPYL4Q9UJ04 414 aa10.29□□□□□ -0.76
GABRE-209ENST00000486255 IKQ13123 557 aaPredicted RBP10.29□□□□□ -0.76
GABRE-209ENST00000486255 GIGYF2Q6Y7W6 1299 aaKnown RBP10.29□□□□□ -0.76
GABRE-209ENST00000486255 CEP57L1Q8IYX8 460 aa10.29□□□□□ -0.76
GABRE-209ENST00000486255 DNAJC2Q99543 621 aaKnown RBP10.29□□□□□ -0.76
GABRE-209ENST00000486255 ARHGAP29Q52LW3 1261 aa10.28□□□□□ -0.76
GABRE-209ENST00000486255 FAM135AQ9P2D6 1515 aa10.28□□□□□ -0.76
GABRE-209ENST00000486255 CFAP74Q9C0B2 1584 aa10.28□□□□□ -0.76
GABRE-209ENST00000486255 SPATA32Q96LK8 384 aa10.28□□□□□ -0.76
GABRE-209ENST00000486255 CYP46A1Q9Y6A2 500 aa10.28□□□□□ -0.76
GABRE-209ENST00000486255 ZSCAN12O43309 604 aa10.28□□□□□ -0.76
GABRE-209ENST00000486255 GOPCQ9HD26 462 aa10.28□□□□□ -0.76
GABRE-209ENST00000486255 WASHC2AQ641Q2 1341 aa10.28□□□□□ -0.76
GABRE-209ENST00000486255 SMC1AQ14683 1233 aaKnown RBP10.28□□□□□ -0.76
GABRE-209ENST00000486255 RIC3Q7Z5B4 369 aa10.28□□□□□ -0.76
GABRE-209ENST00000486255 ZNF397Q8NF99 534 aaPredicted RBP10.28□□□□□ -0.76
GABRE-209ENST00000486255 NBPF8Q3BBV2 869 aa10.28□□□□□ -0.76
GABRE-209ENST00000486255 PAXIP1Q6ZW49 1069 aaPredicted RBP10.28□□□□□ -0.76
GABRE-209ENST00000486255 TIGD1Q96MW7 591 aa10.28□□□□□ -0.76
GABRE-209ENST00000486255 IFFO1Q0D2I5 559 aa10.27□□□□□ -0.76
GABRE-209ENST00000486255 TEX14Q8IWB6 1497 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms