RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
HMG20B-211ENST00000486028 APBA3O96018 575 aa16.84■□□□□ 0.29
HMG20B-211ENST00000486028 BCL9O00512 1426 aa16.84■□□□□ 0.29
HMG20B-211ENST00000486028 RGPD2P0DJD1 1756 aa16.83■□□□□ 0.28
HMG20B-211ENST00000486028 BCL11BQ9C0K0 894 aaPredicted RBP16.83■□□□□ 0.28
HMG20B-211ENST00000486028 MEGF6O75095 1541 aa16.82■□□□□ 0.28
HMG20B-211ENST00000486028 DDX10Q13206 875 aaKnown RBP16.82■□□□□ 0.28
HMG20B-211ENST00000486028 IGSF1Q8N6C5 1336 aa16.81■□□□□ 0.28
HMG20B-211ENST00000486028 IL13P35225 146 aa16.81■□□□□ 0.28
HMG20B-211ENST00000486028 EN1Q05925 392 aaPredicted RBP16.81■□□□□ 0.28
HMG20B-211ENST00000486028 NCAPD2Q15021 1401 aa16.8■□□□□ 0.28
HMG20B-211ENST00000486028 RGPD1P0DJD0 1748 aa16.8■□□□□ 0.28
HMG20B-211ENST00000486028 SPG7Q9UQ90 795 aa16.8■□□□□ 0.28
HMG20B-211ENST00000486028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.79■□□□□ 0.28
HMG20B-211ENST00000486028 DIAPH1O60610 1272 aaKnown RBP16.78■□□□□ 0.28
HMG20B-211ENST00000486028 ACSBG1Q96GR2 724 aa16.78■□□□□ 0.28
HMG20B-211ENST00000486028 CFAP53Q96M91 514 aa16.78■□□□□ 0.28
HMG20B-211ENST00000486028 PCDH11XQ9BZA7 1347 aa16.77■□□□□ 0.28
HMG20B-211ENST00000486028 PCDH11YQ9BZA8 1340 aa16.77■□□□□ 0.28
HMG20B-211ENST00000486028 KCNQ2O43526 872 aa16.77■□□□□ 0.28
HMG20B-211ENST00000486028 PPP2R1AP30153 589 aa16.77■□□□□ 0.28
HMG20B-211ENST00000486028 SULT6B1Q6IMI4 303 aa16.77■□□□□ 0.28
HMG20B-211ENST00000486028 PTF1AQ7RTS3 328 aa16.77■□□□□ 0.28
HMG20B-211ENST00000486028 CAMKK2Q96RR4 588 aa16.77■□□□□ 0.28
HMG20B-211ENST00000486028 PLSCR1O15162 318 aa16.76■□□□□ 0.27
HMG20B-211ENST00000486028 EZH2Q15910 746 aaKnown RBP16.76■□□□□ 0.27
HMG20B-211ENST00000486028 PARD3Q8TEW0 1356 aa16.76■□□□□ 0.27
HMG20B-211ENST00000486028 PLEKHO1Q53GL0 409 aaPredicted RBP16.75■□□□□ 0.27
HMG20B-211ENST00000486028 TNS1Q9HBL0 1735 aaKnown RBP16.74■□□□□ 0.27
HMG20B-211ENST00000486028 CYP27B1O15528 508 aa16.74■□□□□ 0.27
HMG20B-211ENST00000486028 PRIM1P49642 420 aaKnown RBP16.74■□□□□ 0.27
HMG20B-211ENST00000486028 AEBP1Q8IUX7 1158 aa16.74■□□□□ 0.27
HMG20B-211ENST00000486028 KAT6BQ8WYB5 2073 aa16.74■□□□□ 0.27
HMG20B-211ENST00000486028 PLEKHG2Q9H7P9 1386 aa16.74■□□□□ 0.27
HMG20B-211ENST00000486028 SBF2Q86WG5 1849 aa16.73■□□□□ 0.27
HMG20B-211ENST00000486028 AMOTQ4VCS5 1084 aa16.73■□□□□ 0.27
HMG20B-211ENST00000486028 SYTL4Q96C24 671 aaPredicted RBP16.73■□□□□ 0.27
HMG20B-211ENST00000486028 ZNF316A6NFI3 1004 aaPredicted RBP16.72■□□□□ 0.27
HMG20B-211ENST00000486028 NKX1-1Q15270 411 aaPredicted RBP16.72■□□□□ 0.27
HMG20B-211ENST00000486028 RALBP1Q15311 655 aa16.72■□□□□ 0.27
HMG20B-211ENST00000486028 IFNL2Q8IZJ0 200 aa16.72■□□□□ 0.27
HMG20B-211ENST00000486028 U2SURPO15042 1029 aaKnown RBP16.71■□□□□ 0.27
HMG20B-211ENST00000486028 NUDCQ9Y266 331 aa16.71■□□□□ 0.27
HMG20B-211ENST00000486028 KDRP35968 1356 aa16.71■□□□□ 0.27
HMG20B-211ENST00000486028 HMOX1P09601 288 aa16.7■□□□□ 0.26
HMG20B-211ENST00000486028 PHKG2P15735 406 aa16.7■□□□□ 0.26
HMG20B-211ENST00000486028 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
HMG20B-211ENST00000486028 HSP90AB1P08238 724 aaKnown RBP16.69■□□□□ 0.26
HMG20B-211ENST00000486028 ZNF530Q6P9A1 599 aaPredicted RBP16.69■□□□□ 0.26
HMG20B-211ENST00000486028 COL3A1P02461 1466 aaPredicted RBP16.68■□□□□ 0.26
HMG20B-211ENST00000486028 SHANK3Q9BYB0 1731 aa16.68■□□□□ 0.26
HMG20B-211ENST00000486028 MAPK8IP2Q13387 824 aaPredicted RBP16.68■□□□□ 0.26
HMG20B-211ENST00000486028 C1orf141Q5JVX7 400 aa16.68■□□□□ 0.26
HMG20B-211ENST00000486028 NBPF14Q5TI25 921 aa16.68■□□□□ 0.26
HMG20B-211ENST00000486028 NHSQ6T4R5 1651 aa16.68■□□□□ 0.26
HMG20B-211ENST00000486028 PKD1L3Q7Z443 1732 aa16.67■□□□□ 0.26
HMG20B-211ENST00000486028 TXNRD1Q16881 649 aa16.67■□□□□ 0.26
HMG20B-211ENST00000486028 PROM2Q8N271 834 aa16.67■□□□□ 0.26
HMG20B-211ENST00000486028 MSH5O43196 834 aa16.66■□□□□ 0.26
HMG20B-211ENST00000486028 MPRIPQ6WCQ1 1025 aa16.66■□□□□ 0.26
HMG20B-211ENST00000486028 U2AF1L5P0DN76 240 aaPredicted RBP16.65■□□□□ 0.26
HMG20B-211ENST00000486028 U2AF1Q01081 240 aaKnown RBP eCLIP16.65■□□□□ 0.26
HMG20B-211ENST00000486028 DCAF5Q96JK2 942 aa16.65■□□□□ 0.26
HMG20B-211ENST00000486028 ERVV-2B6SEH9 535 aa16.63■□□□□ 0.25
HMG20B-211ENST00000486028 R3HDM1Q15032 1099 aaKnown RBP16.63■□□□□ 0.25
HMG20B-211ENST00000486028 AKAP4Q5JQC9 854 aa16.63■□□□□ 0.25
HMG20B-211ENST00000486028 SLC27A3Q5K4L6 730 aa16.63■□□□□ 0.25
HMG20B-211ENST00000486028 PIGBQ92521 554 aa16.63■□□□□ 0.25
HMG20B-211ENST00000486028 TMOD3Q9NYL9 352 aa16.63■□□□□ 0.25
HMG20B-211ENST00000486028 RGPD3A6NKT7 1758 aaPredicted RBP16.63■□□□□ 0.25
HMG20B-211ENST00000486028 RGPD4Q7Z3J3 1758 aa16.63■□□□□ 0.25
HMG20B-211ENST00000486028 MYBBP1AQ9BQG0 1328 aaKnown RBP16.63■□□□□ 0.25
HMG20B-211ENST00000486028 BTAF1O14981 1849 aa16.63■□□□□ 0.25
HMG20B-211ENST00000486028 DOT1LQ8TEK3 1739 aa16.62■□□□□ 0.25
HMG20B-211ENST00000486028 PSDA5PKW4 1024 aaPredicted RBP16.62■□□□□ 0.25
HMG20B-211ENST00000486028 FCHSD2O94868 740 aa16.62■□□□□ 0.25
HMG20B-211ENST00000486028 SMARCC1Q92922 1105 aaPredicted RBP16.62■□□□□ 0.25
HMG20B-211ENST00000486028 MTHFSDQ2M296 383 aaKnown RBP16.61■□□□□ 0.25
HMG20B-211ENST00000486028 PRKAR2BP31323 418 aa16.6■□□□□ 0.25
HMG20B-211ENST00000486028 CABP4P57796 275 aa16.6■□□□□ 0.25
HMG20B-211ENST00000486028 GAS2L2Q8NHY3 880 aa16.6■□□□□ 0.25
HMG20B-211ENST00000486028 RSPH6AQ9H0K4 717 aa16.6■□□□□ 0.25
HMG20B-211ENST00000486028 PRKRIP1Q9H875 184 aaPredicted RBP16.6■□□□□ 0.25
HMG20B-211ENST00000486028 STK32BQ9NY57 414 aa16.6■□□□□ 0.25
HMG20B-211ENST00000486028 RREB1Q92766 1687 aa16.59■□□□□ 0.25
HMG20B-211ENST00000486028 HMGB2P26583 209 aaKnown RBP16.59■□□□□ 0.25
HMG20B-211ENST00000486028 LRRC4BQ9NT99 713 aa16.59■□□□□ 0.25
HMG20B-211ENST00000486028 CCNL1Q9UK58 526 aaPredicted RBP16.59■□□□□ 0.25
HMG20B-211ENST00000486028 NUP188Q5SRE5 1749 aa16.57■□□□□ 0.24
HMG20B-211ENST00000486028 PALLDQ8WX93 1383 aa16.57■□□□□ 0.24
HMG20B-211ENST00000486028 NEFMP07197 916 aa16.57■□□□□ 0.24
HMG20B-211ENST00000486028 PHACTR3Q96KR7 559 aa16.57■□□□□ 0.24
HMG20B-211ENST00000486028 PNNQ9H307 717 aaKnown RBP16.57■□□□□ 0.24
HMG20B-211ENST00000486028 ANO8Q9HCE9 1232 aaPredicted RBP16.57■□□□□ 0.24
HMG20B-211ENST00000486028 ASAP1Q9ULH1 1129 aa16.57■□□□□ 0.24
HMG20B-211ENST00000486028 KDM6AO15550 1401 aaPredicted RBP16.56■□□□□ 0.24
HMG20B-211ENST00000486028 RNMTO43148 476 aaKnown RBP16.56■□□□□ 0.24
HMG20B-211ENST00000486028 KCNQ4P56696 695 aa16.56■□□□□ 0.24
HMG20B-211ENST00000486028 SLC15A2Q16348 729 aa16.56■□□□□ 0.24
HMG20B-211ENST00000486028 NFATC2IPQ8NCF5 419 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms