RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 NBPF4Q96M43 638 aa14.57□□□□□ -0.08
DDX56-212ENST00000485367 PANK3Q9H999 370 aa14.57□□□□□ -0.08
DDX56-212ENST00000485367 EMILIN1Q9Y6C2 1016 aa14.57□□□□□ -0.08
DDX56-212ENST00000485367 FLT4P35916 1363 aa14.57□□□□□ -0.08
DDX56-212ENST00000485367 RGPD3A6NKT7 1758 aaPredicted RBP14.57□□□□□ -0.08
DDX56-212ENST00000485367 RGPD4Q7Z3J3 1758 aa14.57□□□□□ -0.08
DDX56-212ENST00000485367 INSRP06213 1382 aa14.56□□□□□ -0.08
DDX56-212ENST00000485367 KIF24Q5T7B8 1368 aa14.55□□□□□ -0.08
DDX56-212ENST00000485367 NHSQ6T4R5 1651 aa14.55□□□□□ -0.08
DDX56-212ENST00000485367 LRP5O75197 1615 aa14.55□□□□□ -0.08
DDX56-212ENST00000485367 MAP2P11137 1827 aaKnown RBP14.54□□□□□ -0.08
DDX56-212ENST00000485367 MEGF6O75095 1541 aa14.54□□□□□ -0.08
DDX56-212ENST00000485367 TNNT2P45379 298 aaPredicted RBP14.54□□□□□ -0.08
DDX56-212ENST00000485367 PROM2Q8N271 834 aa14.54□□□□□ -0.08
DDX56-212ENST00000485367 ZCRB1Q8TBF4 217 aaKnown RBP14.54□□□□□ -0.08
DDX56-212ENST00000485367 RAPGEF4Q8WZA2 1011 aa14.53□□□□□ -0.08
DDX56-212ENST00000485367 TXNRD1Q16881 649 aa14.52□□□□□ -0.08
DDX56-212ENST00000485367 ANKRD26Q9UPS8 1709 aa14.52□□□□□ -0.08
DDX56-212ENST00000485367 BTAF1O14981 1849 aa14.52□□□□□ -0.09
DDX56-212ENST00000485367 TATP17735 454 aaPredicted RBP14.52□□□□□ -0.09
DDX56-212ENST00000485367 POLKQ9UBT6 870 aa14.51□□□□□ -0.09
DDX56-212ENST00000485367 SHANK3Q9BYB0 1731 aa14.5□□□□□ -0.09
DDX56-212ENST00000485367 SYTL4Q96C24 671 aaPredicted RBP14.5□□□□□ -0.09
DDX56-212ENST00000485367 ANO8Q9HCE9 1232 aaPredicted RBP14.5□□□□□ -0.09
DDX56-212ENST00000485367 WASHC2AQ641Q2 1341 aa14.5□□□□□ -0.09
DDX56-212ENST00000485367 PRIM1P49642 420 aaKnown RBP14.49□□□□□ -0.09
DDX56-212ENST00000485367 KIF7Q2M1P5 1343 aa14.49□□□□□ -0.09
DDX56-212ENST00000485367 STK32BQ9NY57 414 aa14.48□□□□□ -0.09
DDX56-212ENST00000485367 KNSTRNQ9Y448 316 aa14.48□□□□□ -0.09
DDX56-212ENST00000485367 DOT1LQ8TEK3 1739 aa14.48□□□□□ -0.09
DDX56-212ENST00000485367 MORC1Q86VD1 984 aa14.47□□□□□ -0.09
DDX56-212ENST00000485367 NSD2O96028 1365 aa14.47□□□□□ -0.09
DDX56-212ENST00000485367 EYA1Q99502 592 aa14.46□□□□□ -0.09
DDX56-212ENST00000485367 PCDH11XQ9BZA7 1347 aa14.45□□□□□ -0.1
DDX56-212ENST00000485367 PCDH11YQ9BZA8 1340 aa14.45□□□□□ -0.1
DDX56-212ENST00000485367 CCER2I3L3R5 266 aa14.45□□□□□ -0.1
DDX56-212ENST00000485367 SLC15A2Q16348 729 aa14.45□□□□□ -0.1
DDX56-212ENST00000485367 SPON1Q9HCB6 807 aa14.45□□□□□ -0.1
DDX56-212ENST00000485367 NEFLP07196 543 aa14.45□□□□□ -0.1
DDX56-212ENST00000485367 EIF4A2Q14240 407 aaKnown RBP14.45□□□□□ -0.1
DDX56-212ENST00000485367 PDGFDQ9GZP0 370 aaPredicted RBP14.45□□□□□ -0.1
DDX56-212ENST00000485367 CYP27B1O15528 508 aa14.43□□□□□ -0.1
DDX56-212ENST00000485367 LRRC4BQ9NT99 713 aa14.43□□□□□ -0.1
DDX56-212ENST00000485367 SPG7Q9UQ90 795 aa14.43□□□□□ -0.1
DDX56-212ENST00000485367 NCAPD2Q15021 1401 aa14.43□□□□□ -0.1
DDX56-212ENST00000485367 CASZ1Q86V15 1759 aa14.43□□□□□ -0.1
DDX56-212ENST00000485367 PKD1L3Q7Z443 1732 aa14.42□□□□□ -0.1
DDX56-212ENST00000485367 ZBTB7AO95365 584 aa14.42□□□□□ -0.1
DDX56-212ENST00000485367 SLC27A3Q5K4L6 730 aa14.42□□□□□ -0.1
DDX56-212ENST00000485367 PPP1R1BQ9UD71 204 aaPredicted RBP14.42□□□□□ -0.1
DDX56-212ENST00000485367 KCNQ4P56696 695 aa14.41□□□□□ -0.1
DDX56-212ENST00000485367 FKBP8Q14318 412 aa14.41□□□□□ -0.1
DDX56-212ENST00000485367 AMER1Q5JTC6 1135 aaPredicted RBP14.41□□□□□ -0.1
DDX56-212ENST00000485367 PAPPAQ13219 1627 aa14.41□□□□□ -0.1
DDX56-212ENST00000485367 ZNF827Q17R98 1081 aa14.4□□□□□ -0.1
DDX56-212ENST00000485367 MPRIPQ6WCQ1 1025 aa14.4□□□□□ -0.1
DDX56-212ENST00000485367 ATF5Q9Y2D1 282 aaPredicted RBP14.39□□□□□ -0.11
DDX56-212ENST00000485367 LY75O60449 1722 aa14.39□□□□□ -0.11
DDX56-212ENST00000485367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.39□□□□□ -0.112e-6■□□□□ 10.5
DDX56-212ENST00000485367 CCNL1Q9UK58 526 aaPredicted RBP14.39□□□□□ -0.11
DDX56-212ENST00000485367 IGSF1Q8N6C5 1336 aa14.38□□□□□ -0.11
DDX56-212ENST00000485367 ITGB4P16144 1822 aa14.38□□□□□ -0.11
DDX56-212ENST00000485367 CC2D1BQ5T0F9 858 aaKnown RBP14.38□□□□□ -0.11
DDX56-212ENST00000485367 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
DDX56-212ENST00000485367 RBM19Q9Y4C8 960 aaKnown RBP14.38□□□□□ -0.11
DDX56-212ENST00000485367 TOGARAM1Q9Y4F4 1720 aa14.38□□□□□ -0.11
DDX56-212ENST00000485367 PER1O15534 1290 aaPredicted RBP14.37□□□□□ -0.11
DDX56-212ENST00000485367 CNGB1Q14028 1251 aaPredicted RBP14.37□□□□□ -0.11
DDX56-212ENST00000485367 NKX1-1Q15270 411 aaPredicted RBP14.37□□□□□ -0.11
DDX56-212ENST00000485367 IFNL2Q8IZJ0 200 aa14.37□□□□□ -0.11
DDX56-212ENST00000485367 PHKG2P15735 406 aa14.36□□□□□ -0.11
DDX56-212ENST00000485367 MTFR1LQ9H019 292 aa14.36□□□□□ -0.11
DDX56-212ENST00000485367 TFCP2L1Q9NZI6 479 aa14.36□□□□□ -0.11
DDX56-212ENST00000485367 AEBP1Q8IUX7 1158 aa14.35□□□□□ -0.11
DDX56-212ENST00000485367 PALLDQ8WX93 1383 aa14.35□□□□□ -0.11
DDX56-212ENST00000485367 PTGER2P43116 358 aa14.34□□□□□ -0.11
DDX56-212ENST00000485367 MTHFSP49914 203 aa14.34□□□□□ -0.11
DDX56-212ENST00000485367 PLEKHO1Q53GL0 409 aaPredicted RBP14.34□□□□□ -0.11
DDX56-212ENST00000485367 PIGBQ92521 554 aa14.34□□□□□ -0.11
DDX56-212ENST00000485367 IL13P35225 146 aa14.34□□□□□ -0.11
DDX56-212ENST00000485367 SULT6B1Q6IMI4 303 aa14.34□□□□□ -0.11
DDX56-212ENST00000485367 SMARCC1Q92922 1105 aaPredicted RBP14.34□□□□□ -0.11
DDX56-212ENST00000485367 TMOD3Q9NYL9 352 aa14.34□□□□□ -0.11
DDX56-212ENST00000485367 PNPLA7Q6ZV29 1317 aa14.33□□□□□ -0.12
DDX56-212ENST00000485367 TUBGCP6Q96RT7 1819 aa14.33□□□□□ -0.12
DDX56-212ENST00000485367 QSER1Q2KHR3 1735 aa14.32□□□□□ -0.12
DDX56-212ENST00000485367 ZNF530Q6P9A1 599 aaPredicted RBP14.32□□□□□ -0.12
DDX56-212ENST00000485367 PLEKHG2Q9H7P9 1386 aa14.32□□□□□ -0.12
DDX56-212ENST00000485367 AMOTQ4VCS5 1084 aa14.32□□□□□ -0.12
DDX56-212ENST00000485367 FANCIQ9NVI1 1328 aa14.31□□□□□ -0.12
DDX56-212ENST00000485367 C5P01031 1676 aa14.31□□□□□ -0.12
DDX56-212ENST00000485367 MSH5O43196 834 aa14.31□□□□□ -0.12
DDX56-212ENST00000485367 ANP32CO43423 234 aa14.31□□□□□ -0.12
DDX56-212ENST00000485367 TAF1LQ8IZX4 1826 aa14.3□□□□□ -0.12
DDX56-212ENST00000485367 HSP90AB1P08238 724 aaKnown RBP14.3□□□□□ -0.12
DDX56-212ENST00000485367 SLC16A10Q8TF71 515 aa14.3□□□□□ -0.12
DDX56-212ENST00000485367 SGIP1Q9BQI5 828 aa14.3□□□□□ -0.12
DDX56-212ENST00000485367 ASAP1Q9ULH1 1129 aa14.3□□□□□ -0.12
DDX56-212ENST00000485367 NPC1L1Q9UHC9 1359 aa14.3□□□□□ -0.12
DDX56-212ENST00000485367 HMGB2P26583 209 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms